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Commit History
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cleaning up organization of scripts and data and updating filepaths in app to processed data
JDFPalladium389c5f0
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adding id and sitecodes to dropdown and formatting
JDFPalladium233d8ee
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fixing module imports for phi filter
JDFPalladium279c5c4 -
adding county-disease matrix
JDFPalladiumf9557a1
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Add Docker containers 4 Clinical Assistant deploym
Emmanuel Chinonye Nnajiofor- Created Dockerfile to build containerized application * Uses Python 3.11 slim base image for lightweight deployment * Configures Python environment variables for optimization * Installs system dependencies required for FAISS and scientific packages * Implements dependency caching strategy for efficient builds * Exposes Gradio's default port (7860) for web access * Sets default startup command to launch app.py - Updated documentation to reflect Docker deployment option * Added Docker alternative to setup instructions in README * Noted container-specific considerations in deployment notes - Maintained all existing functionality while enabling: * Consistent execution environment across platforms * Simplified deployment to cloud services and local machines * Isolation of dependencies from host systems * Reproducible builds for development and productione23fefd
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Migrate project from pip to UV package manager
Emmanuel Chinonye Nnajiofor- Remove requirements.txt and old pip‑based install commands - Add pyproject.toml and uv.lock for dependency declaration & locking - Replace `make install` with `make install` → `uv sync` - Update Makefile targets (lint, test, format, run) to use `uv` commands - added logger.py file to enable logs across project - Adjusted README.md for the new logger.py file added. - Cleaned out comments - Other minor changes This change improves reproducibility by using UV’s lockfile and isolated virtual environments, and centralizes all commands under `uv run` so tools always execute in the correct env.4c42be0
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linting
JDFPalladiumafe6838
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cleaning llm loading
JDFPalladiumf0e2099 -
adding phi detection
JDFPalladiumc1f3739