| file_path: | |
| file_qc_results: './files/file_qc_results.csv' | |
| dataset_qc_results: './files/site_ins_qc_results.csv' | |
| analyzed_gating_results: './files/analyzed_results_compilation.csv' | |
| analyzed_gating_results_wCDAResults: './files/analyzed_results_compilation_wCDAResults.csv' | |
| qc_results_tab: | |
| file_infos: ['Dataset', 'Site (anonymized)', 'Instrument model', 'File', 'SOP-Exp', 'Material', 'Repeat times', 'QC status'] | |
| issues: ['Missing file', 'Insufficient event', 'Missing time', 'Missing FSCA/SSCA', 'Missing FSCH/SSCH', 'Missing fluorescence', 'Voltage flipped'] | |
| file_sets: ['Rainbow bead and FC beads (SOP1-e1)', 'All cryoPBMCs (SOP3-e1, except FMO)'] | |
| gating_results_tab: | |
| exp_infos: ['Dataset', 'Site (anonymized)', 'Instrument model', 'Result ID', 'Sample', 'SOP-Exp', 'Repetition', 'Compensation control', 'Gating control', 'Population', 'Phenotype', 'Parent gate'] | |
| results: ['Cell population (%)', 'Abs. cell count (volume)', 'Abs. cell count (TruCount)', 'MedFI', 'rSD', 'ERF'] |