bio-nexus-api / bioai-platform /backend /app /routers /structure_analysis.py

Commit History

test: comprehensive validation & fuzz testing with bug fixes
d17fdb8

Samad14 commited on

fix: robust Foldseek parsing, add logging, handle missing results key and variant target formats
d35f0c4

Samad14 commited on

fix: Foldseek alignments are [dict] lists, parse target format
5f521f2

Samad14 commited on

fix: debug alignment structure types
19208a9

Samad14 commited on

fix: debug Foldseek result structure
61dd06a

Samad14 commited on

fix: Foldseek alignments are dicts, parse with .get() correctly
7756be4

Samad14 commited on

fix: debug Foldseek alignment format (list vs dict)
758bd07

Samad14 commited on

fix: add full traceback to Foldseek error
106504c

Samad14 commited on

fix: use aiohttp for Foldseek multipart upload
feb3584

Samad14 commited on

fix: debug Foldseek submit response type
2058534

Samad14 commited on

fix: use sync httpx in thread pool for Foldseek submit
8dd7e6b

Samad14 commited on

fix: restore nested alignments loop, remove debug raw
e598246

Samad14 commited on

fix: return raw Foldseek data for debugging
36a7562

Samad14 commited on

fix: Foldseek returns list directly, no alignments sub-key
87455a5

Samad14 commited on

fix: move fetch inside httpx async with block
a55a85f

Samad14 commited on

fix: manual multipart for Foldseek, add secrets import
3b0a62a

Samad14 commited on

fix: use sync httpx.Client for Foldseek multipart upload
6f0c958

Samad14 commited on

fix: add error detail to Foldseek, use bytes, longer timeout
e368884

Samad14 commited on

fix: simplify Foldseek integration, use full PDB, encode as bytes
b4c387f

Samad14 commited on

fix: primer error handling, interactions scores, structure comparison API
3030b52

Samad14 commited on

feat: domains, interactions, primers, structure analysis, wizard, phylo tree, conservation
bac1801

Samad14 commited on