feat(design): bioluminescent green+violet palette and re-tuned landing hero

feat(theme): dual light/dark mode with Apple light theme, toggle, and theme-aware viewers

feat(seq-tools): share colored MSA viewer across BLAST job, alignment tool, report, shared and phylo surfaces

feat(seq-tools): MSA match/mismatch/gap cell highlighting, consensus row and legend

feat(seq-tools): motif categories & structure overlay, dot-plot scoring & features, cross-tool links

feat(alignment): show matched/mismatched/gaps/length stats across all alignment views via shared AlignmentStatsBar

feat(export): add downloads to ADMET, MD, pairwise, AlphaFold, docking, pathway, plus 4 new learn topics

Add MSA pairwise refinement, new UI components (SmoothLoader, Reveal, CursorGlow, Parallax), rate-limit handling in AIInterpretation

Add global/local BLAST modes, full-length pairwise alignment view, standalone pairwise tool

chore: frontend design polish (accent palette, remove glow/gradient utils), ignore installed skill trees, add opencode skills config

feat: add PNG/TSV/JSON/CSV/FASTA export to all 8 tool components

feat: domains, interactions, primers, structure analysis, wizard, phylo tree, conservation