CellTriage / outputs /reports /protocol_shift_context.json
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CellTriage QC operator console - inference only, CPU-bound classical ML
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{
"budget": 100,
"confounding": {
"n_families": 18,
"n_families_confined_to_one_batch": 12,
"cells_in_single_batch_families": 59,
"fraction_of_cohort_confounded": 0.4797,
"families_confined_to_one_batch": {
"1.0": {
"batch2": 1
},
"2.0": {
"batch2": 3
},
"3.7": {
"batch3": 3
},
"4.65": {
"batch2": 3
},
"4.9": {
"batch2": 3
},
"5.0": {
"batch3": 6
},
"5.2": {
"batch2": 6
},
"5.3": {
"batch3": 8
},
"5.4": {
"batch1": 10
},
"5.9": {
"batch3": 4
},
"7.0": {
"batch1": 6
},
"8.0": {
"batch1": 6
}
}
},
"phase9_h4_prediction": "Phase 9 H4 found RMSE unchanged to four decimals (0.0597 -> 0.0597) when Group F was removed, so the with/without comparison here was expected to be undramatic."
}