Spaces:
Sleeping
Sleeping
Update app.py
Browse files
app.py
CHANGED
|
@@ -1,6 +1,6 @@
|
|
| 1 |
"""
|
| 2 |
-
PaperSearchPro -
|
| 3 |
-
|
| 4 |
"""
|
| 5 |
|
| 6 |
import requests
|
|
@@ -8,535 +8,147 @@ import pandas as pd
|
|
| 8 |
import time
|
| 9 |
from datetime import datetime
|
| 10 |
import gradio as gr
|
| 11 |
-
import tempfile
|
| 12 |
import os
|
| 13 |
|
| 14 |
-
#
|
|
|
|
|
|
|
|
|
|
| 15 |
custom_css = """
|
| 16 |
@import url('https://fonts.googleapis.com/css2?family=Inter:wght@400;500;600;700&display=swap');
|
| 17 |
|
| 18 |
:root {
|
| 19 |
--primary: #2563eb;
|
| 20 |
-
--primary-dark: #1d4ed8;
|
| 21 |
--secondary: #7c3aed;
|
| 22 |
-
--success: #10b981;
|
| 23 |
-
--warning: #f59e0b;
|
| 24 |
-
--danger: #ef4444;
|
| 25 |
-
|
| 26 |
-
/* Light theme - BLACK TEXT ON WHITE BACKGROUNDS */
|
| 27 |
-
--bg-page: #ffffff;
|
| 28 |
-
--bg-card: #ffffff;
|
| 29 |
-
--bg-input: #ffffff;
|
| 30 |
-
--bg-hover: #f3f4f6;
|
| 31 |
--border: #e5e7eb;
|
| 32 |
-
|
| 33 |
-
--text-
|
| 34 |
-
--text-secondary: #1f2937;
|
| 35 |
-
--text-muted: #4b5563;
|
| 36 |
-
--text-inverse: #ffffff;
|
| 37 |
-
|
| 38 |
-
--shadow: 0 1px 3px rgba(0,0,0,0.1);
|
| 39 |
-
--shadow-lg: 0 10px 15px -3px rgba(0,0,0,0.1);
|
| 40 |
-
|
| 41 |
-
--radius: 0.5rem;
|
| 42 |
-
}
|
| 43 |
-
|
| 44 |
-
/* Base styles - WHITE BACKGROUND, BLACK TEXT */
|
| 45 |
-
.gradio-container {
|
| 46 |
-
background-color: var(--bg-page) !important;
|
| 47 |
-
font-family: 'Inter', -apple-system, sans-serif !important;
|
| 48 |
-
color: #000000 !important;
|
| 49 |
}
|
| 50 |
|
| 51 |
-
|
| 52 |
-
|
| 53 |
-
|
| 54 |
-
|
| 55 |
-
color: #000000 !important;
|
| 56 |
-
background-color: transparent !important;
|
| 57 |
}
|
| 58 |
|
| 59 |
-
|
| 60 |
-
|
| 61 |
-
|
| 62 |
}
|
| 63 |
|
| 64 |
-
/* Cards - WHITE BACKGROUND */
|
| 65 |
.white-card {
|
| 66 |
-
background
|
| 67 |
-
border-radius: var(--radius) !important;
|
| 68 |
-
padding: 1.5rem !important;
|
| 69 |
border: 1px solid var(--border) !important;
|
| 70 |
-
|
| 71 |
-
|
| 72 |
-
|
| 73 |
-
/* Headers - BLACK */
|
| 74 |
-
h1 {
|
| 75 |
-
font-size: 2.5rem !important;
|
| 76 |
-
font-weight: 700 !important;
|
| 77 |
-
color: #000000 !important;
|
| 78 |
-
background-color: transparent !important;
|
| 79 |
}
|
| 80 |
|
| 81 |
h1 span {
|
| 82 |
background: linear-gradient(135deg, var(--primary), var(--secondary));
|
| 83 |
-webkit-background-clip: text;
|
| 84 |
-webkit-text-fill-color: transparent;
|
| 85 |
-
background-color: transparent !important;
|
| 86 |
-
}
|
| 87 |
-
|
| 88 |
-
h3 {
|
| 89 |
-
font-size: 1.25rem !important;
|
| 90 |
-
font-weight: 600 !important;
|
| 91 |
-
color: #000000 !important;
|
| 92 |
-
margin-bottom: 1rem !important;
|
| 93 |
-
background-color: transparent !important;
|
| 94 |
}
|
| 95 |
|
| 96 |
-
|
| 97 |
-
|
| 98 |
-
|
| 99 |
-
|
| 100 |
-
border-radius: var(--radius) !important;
|
| 101 |
-
padding: 0.625rem 0.875rem !important;
|
| 102 |
-
color: #000000 !important;
|
| 103 |
-
font-size: 0.95rem !important;
|
| 104 |
-
width: 100% !important;
|
| 105 |
-
}
|
| 106 |
-
|
| 107 |
-
input:focus, textarea:focus, select:focus {
|
| 108 |
-
border-color: var(--primary) !important;
|
| 109 |
-
outline: none !important;
|
| 110 |
-
box-shadow: 0 0 0 3px rgba(37, 99, 235, 0.1) !important;
|
| 111 |
-
}
|
| 112 |
-
|
| 113 |
-
input::placeholder, textarea::placeholder {
|
| 114 |
-
color: #6b7280 !important;
|
| 115 |
-
opacity: 1 !important;
|
| 116 |
-
}
|
| 117 |
-
|
| 118 |
-
/* Labels - BLACK */
|
| 119 |
-
label, .gr-label {
|
| 120 |
-
color: #000000 !important;
|
| 121 |
-
font-size: 0.875rem !important;
|
| 122 |
-
font-weight: 600 !important;
|
| 123 |
-
margin-bottom: 0.375rem !important;
|
| 124 |
-
display: block !important;
|
| 125 |
-
background-color: transparent !important;
|
| 126 |
-
}
|
| 127 |
-
|
| 128 |
-
/* Buttons */
|
| 129 |
-
.gr-button-primary {
|
| 130 |
-
background: linear-gradient(135deg, var(--primary), var(--secondary)) !important;
|
| 131 |
-
border: none !important;
|
| 132 |
-
color: #ffffff !important;
|
| 133 |
-
font-weight: 600 !important;
|
| 134 |
-
padding: 0.75rem 1.5rem !important;
|
| 135 |
-
border-radius: var(--radius) !important;
|
| 136 |
-
cursor: pointer !important;
|
| 137 |
-
transition: all 0.2s !important;
|
| 138 |
-
font-size: 1rem !important;
|
| 139 |
-
width: 100% !important;
|
| 140 |
-
}
|
| 141 |
-
|
| 142 |
-
.gr-button-primary:hover {
|
| 143 |
-
transform: translateY(-2px);
|
| 144 |
-
box-shadow: var(--shadow-lg) !important;
|
| 145 |
-
}
|
| 146 |
-
|
| 147 |
-
.gr-button-secondary {
|
| 148 |
-
background-color: #ffffff !important;
|
| 149 |
-
border: 1px solid var(--border) !important;
|
| 150 |
-
color: #000000 !important;
|
| 151 |
-
font-weight: 500 !important;
|
| 152 |
-
padding: 0.75rem 1.5rem !important;
|
| 153 |
-
border-radius: var(--radius) !important;
|
| 154 |
-
cursor: pointer !important;
|
| 155 |
-
transition: all 0.2s !important;
|
| 156 |
-
width: 100% !important;
|
| 157 |
-
}
|
| 158 |
-
|
| 159 |
-
.gr-button-secondary:hover {
|
| 160 |
-
background-color: var(--bg-hover) !important;
|
| 161 |
-
border-color: #000000 !important;
|
| 162 |
-
}
|
| 163 |
-
|
| 164 |
-
/* Table/Dataframe - WHITE BACKGROUND, BLACK TEXT */
|
| 165 |
-
.gr-dataframe {
|
| 166 |
-
background-color: #ffffff !important;
|
| 167 |
-
border: 1px solid var(--border) !important;
|
| 168 |
-
border-radius: var(--radius) !important;
|
| 169 |
-
overflow: hidden !important;
|
| 170 |
-
}
|
| 171 |
-
|
| 172 |
-
.gr-dataframe table {
|
| 173 |
-
width: 100% !important;
|
| 174 |
-
border-collapse: collapse !important;
|
| 175 |
-
background-color: #ffffff !important;
|
| 176 |
-
}
|
| 177 |
-
|
| 178 |
-
.gr-dataframe th {
|
| 179 |
-
background-color: #f9fafb !important;
|
| 180 |
-
color: #000000 !important;
|
| 181 |
-
font-weight: 600 !important;
|
| 182 |
-
font-size: 0.875rem !important;
|
| 183 |
-
padding: 0.875rem !important;
|
| 184 |
-
border-bottom: 2px solid var(--border) !important;
|
| 185 |
-
text-align: left !important;
|
| 186 |
-
}
|
| 187 |
-
|
| 188 |
-
.gr-dataframe td {
|
| 189 |
-
padding: 0.875rem !important;
|
| 190 |
-
border-bottom: 1px solid var(--border) !important;
|
| 191 |
-
color: #000000 !important;
|
| 192 |
-
font-size: 0.875rem !important;
|
| 193 |
-
background-color: #ffffff !important;
|
| 194 |
-
}
|
| 195 |
-
|
| 196 |
-
.gr-dataframe tr:last-child td {
|
| 197 |
-
border-bottom: none !important;
|
| 198 |
}
|
|
|
|
| 199 |
|
| 200 |
-
|
| 201 |
-
|
| 202 |
-
|
| 203 |
|
| 204 |
-
|
| 205 |
-
.gr-slider {
|
| 206 |
-
background: linear-gradient(90deg, var(--primary), var(--secondary)) !important;
|
| 207 |
-
height: 6px !important;
|
| 208 |
-
border-radius: 3px !important;
|
| 209 |
-
}
|
| 210 |
|
| 211 |
-
|
| 212 |
-
|
| 213 |
-
|
| 214 |
-
}
|
| 215 |
|
| 216 |
-
|
| 217 |
-
.gr-checkbox {
|
| 218 |
-
accent-color: var(--primary) !important;
|
| 219 |
-
width: 1.125rem !important;
|
| 220 |
-
height: 1.125rem !important;
|
| 221 |
-
}
|
| 222 |
|
| 223 |
-
|
| 224 |
-
|
| 225 |
-
|
| 226 |
-
|
|
|
|
|
|
|
|
|
|
| 227 |
|
| 228 |
-
|
| 229 |
-
.metric-card {
|
| 230 |
-
background-color: #ffffff !important;
|
| 231 |
-
border-radius: var(--radius) !important;
|
| 232 |
-
padding: 1rem !important;
|
| 233 |
-
border: 1px solid var(--border) !important;
|
| 234 |
-
text-align: center !important;
|
| 235 |
-
}
|
| 236 |
|
| 237 |
-
|
| 238 |
-
|
| 239 |
-
font-weight: 700 !important;
|
| 240 |
-
color: var(--primary) !important;
|
| 241 |
-
line-height: 1.2 !important;
|
| 242 |
-
margin: 0 !important;
|
| 243 |
-
background-color: transparent !important;
|
| 244 |
-
}
|
| 245 |
|
| 246 |
-
|
| 247 |
-
|
| 248 |
-
|
| 249 |
-
|
| 250 |
-
|
| 251 |
-
}
|
| 252 |
|
| 253 |
-
|
| 254 |
-
|
| 255 |
-
display: inline-block;
|
| 256 |
-
padding: 0.375rem 1rem;
|
| 257 |
-
border-radius: 9999px;
|
| 258 |
-
font-size: 0.875rem;
|
| 259 |
-
font-weight: 600;
|
| 260 |
-
margin: 0.25rem;
|
| 261 |
-
}
|
| 262 |
|
| 263 |
-
.
|
| 264 |
-
|
| 265 |
-
|
| 266 |
-
border: 1px solid #fecaca;
|
| 267 |
-
}
|
| 268 |
|
| 269 |
-
|
| 270 |
-
|
| 271 |
-
color: #166534 !important;
|
| 272 |
-
border: 1px solid #bbf7d0;
|
| 273 |
-
}
|
| 274 |
|
| 275 |
-
|
| 276 |
-
|
| 277 |
-
|
| 278 |
-
border-left: 4px solid var(--primary);
|
| 279 |
-
border-radius: var(--radius);
|
| 280 |
-
padding: 1rem;
|
| 281 |
-
margin: 1rem 0;
|
| 282 |
-
}
|
| 283 |
|
| 284 |
-
|
| 285 |
-
|
| 286 |
-
}
|
| 287 |
|
| 288 |
-
|
| 289 |
-
|
| 290 |
-
|
| 291 |
-
font-size: 0.875rem !important;
|
| 292 |
-
padding: 0.5rem !important;
|
| 293 |
-
background-color: #ffffff !important;
|
| 294 |
-
}
|
| 295 |
|
| 296 |
-
|
| 297 |
-
.gr-file {
|
| 298 |
-
background-color: #ffffff !important;
|
| 299 |
-
border: 1px solid var(--border) !important;
|
| 300 |
-
border-radius: var(--radius) !important;
|
| 301 |
-
padding: 0.5rem !important;
|
| 302 |
-
}
|
| 303 |
|
| 304 |
-
|
| 305 |
-
|
| 306 |
-
text-decoration: none !important;
|
| 307 |
-
font-weight: 500 !important;
|
| 308 |
-
}
|
| 309 |
|
| 310 |
-
|
| 311 |
-
|
| 312 |
-
}
|
| 313 |
|
| 314 |
-
|
| 315 |
-
|
| 316 |
-
|
| 317 |
-
border: 1px solid var(--border) !important;
|
| 318 |
-
border-radius: var(--radius) !important;
|
| 319 |
-
padding: 0.5rem !important;
|
| 320 |
-
color: #000000 !important;
|
| 321 |
-
}
|
| 322 |
|
| 323 |
-
|
| 324 |
-
|
| 325 |
-
background-color: transparent !important;
|
| 326 |
-
}
|
| 327 |
|
| 328 |
-
|
| 329 |
-
|
| 330 |
-
|
| 331 |
-
|
| 332 |
|
| 333 |
-
|
| 334 |
-
|
| 335 |
-
border-bottom: 1px solid var(--border) !important;
|
| 336 |
-
}
|
| 337 |
|
| 338 |
-
.
|
| 339 |
-
color: #000000 !important;
|
| 340 |
-
background-color: transparent !important;
|
| 341 |
-
}
|
| 342 |
|
| 343 |
-
.
|
| 344 |
-
|
| 345 |
-
border-bottom: 2px solid var(--primary) !important;
|
| 346 |
-
}
|
| 347 |
|
| 348 |
-
|
| 349 |
-
.
|
| 350 |
-
|
| 351 |
-
|
| 352 |
-
}
|
| 353 |
|
| 354 |
-
|
| 355 |
-
color: #000000 !important;
|
| 356 |
-
}
|
| 357 |
|
| 358 |
-
|
| 359 |
-
background-color: #f3f4f6 !important;
|
| 360 |
-
}
|
| 361 |
|
| 362 |
-
|
| 363 |
-
@media (max-width: 768px) {
|
| 364 |
-
.white-card {
|
| 365 |
-
padding: 1rem !important;
|
| 366 |
-
}
|
| 367 |
-
|
| 368 |
-
h1 {
|
| 369 |
-
font-size: 2rem !important;
|
| 370 |
-
}
|
| 371 |
-
|
| 372 |
-
.metric-value {
|
| 373 |
-
font-size: 1.5rem !important;
|
| 374 |
-
}
|
| 375 |
-
}
|
| 376 |
-
"""
|
| 377 |
|
| 378 |
-
|
| 379 |
-
def __init__(self):
|
| 380 |
-
self.base_url = "https://api.openalex.org/works"
|
| 381 |
-
self.per_page = 200
|
| 382 |
-
|
| 383 |
-
def search_papers(self, query, keywords, sort_by, sort_order, max_papers,
|
| 384 |
-
year_from, year_to, open_access):
|
| 385 |
-
|
| 386 |
-
# Prepare sort parameter
|
| 387 |
-
sort_order_param = 'asc' if sort_order == "ascending" else 'desc'
|
| 388 |
-
sort_field_map = {
|
| 389 |
-
"citations": "cited_by_count",
|
| 390 |
-
"year": "publication_year",
|
| 391 |
-
"date": "publication_date",
|
| 392 |
-
"title": "title",
|
| 393 |
-
"relevance": "relevance_score"
|
| 394 |
-
}
|
| 395 |
-
api_sort_field = sort_field_map.get(sort_by, "cited_by_count")
|
| 396 |
-
sort_param = f"{api_sort_field}:{sort_order_param}"
|
| 397 |
-
|
| 398 |
-
# Prepare filters
|
| 399 |
-
filters = []
|
| 400 |
-
if year_from and year_from > 0:
|
| 401 |
-
filters.append(f"publication_year:>{year_from-1}")
|
| 402 |
-
if year_to and year_to > 0:
|
| 403 |
-
filters.append(f"publication_year:<{year_to+1}")
|
| 404 |
-
if open_access:
|
| 405 |
-
filters.append("open_access.is_oa:true")
|
| 406 |
-
|
| 407 |
-
filter_str = ",".join(filters) if filters else None
|
| 408 |
-
|
| 409 |
-
all_papers = []
|
| 410 |
-
page = 1
|
| 411 |
-
max_attempts = 50
|
| 412 |
-
|
| 413 |
-
# Fetch papers
|
| 414 |
-
while len(all_papers) < max_papers and page <= max_attempts:
|
| 415 |
-
params = {
|
| 416 |
-
'search': query,
|
| 417 |
-
'per-page': self.per_page,
|
| 418 |
-
'page': page,
|
| 419 |
-
'sort': sort_param
|
| 420 |
-
}
|
| 421 |
-
|
| 422 |
-
if filter_str:
|
| 423 |
-
params['filter'] = filter_str
|
| 424 |
-
|
| 425 |
-
try:
|
| 426 |
-
response = requests.get(self.base_url, params=params, timeout=15)
|
| 427 |
-
data = response.json()
|
| 428 |
-
results = data.get("results", [])
|
| 429 |
-
|
| 430 |
-
if not results:
|
| 431 |
-
break
|
| 432 |
-
|
| 433 |
-
for work in results:
|
| 434 |
-
paper = self._extract_paper_info(work)
|
| 435 |
-
all_papers.append(paper)
|
| 436 |
-
|
| 437 |
-
page += 1
|
| 438 |
-
time.sleep(0.3)
|
| 439 |
-
|
| 440 |
-
except Exception as e:
|
| 441 |
-
break
|
| 442 |
-
|
| 443 |
-
# Strict hierarchical filtering
|
| 444 |
-
keyword_list = []
|
| 445 |
-
if keywords and keywords.strip():
|
| 446 |
-
keyword_list = [k.strip().lower() for k in keywords.split(',') if k.strip()]
|
| 447 |
-
|
| 448 |
-
if len(keyword_list) >= 2:
|
| 449 |
-
scored_papers = []
|
| 450 |
-
for paper in all_papers:
|
| 451 |
-
title_text = paper['Title'].lower()
|
| 452 |
-
abstract_text = paper.get('Abstract', '').lower()
|
| 453 |
-
authors_text = paper['Authors'].lower()
|
| 454 |
-
|
| 455 |
-
combined_text = f"{title_text} {abstract_text} {authors_text}"
|
| 456 |
-
|
| 457 |
-
# Check if BOTH keywords are present
|
| 458 |
-
kw1_present = keyword_list[0] in combined_text
|
| 459 |
-
kw2_present = keyword_list[1] in combined_text
|
| 460 |
-
|
| 461 |
-
if not (kw1_present and kw2_present):
|
| 462 |
-
continue
|
| 463 |
-
|
| 464 |
-
# Check abstract
|
| 465 |
-
if (keyword_list[0] in abstract_text) or (keyword_list[1] in abstract_text):
|
| 466 |
-
paper['abstract_match'] = "Yes"
|
| 467 |
-
else:
|
| 468 |
-
paper['abstract_match'] = "No"
|
| 469 |
-
|
| 470 |
-
# Calculate score
|
| 471 |
-
score = 2
|
| 472 |
-
matched = [keyword_list[0], keyword_list[1]]
|
| 473 |
-
|
| 474 |
-
for idx, kw in enumerate(keyword_list[2:], start=3):
|
| 475 |
-
if kw in combined_text:
|
| 476 |
-
score += (len(keyword_list) - idx + 1)
|
| 477 |
-
matched.append(kw)
|
| 478 |
-
|
| 479 |
-
if paper['abstract_match'] == "Yes":
|
| 480 |
-
score += 1
|
| 481 |
-
|
| 482 |
-
paper['Abstract_Short'] = paper['Abstract'][:200] + "..." if len(paper['Abstract']) > 200 else paper['Abstract']
|
| 483 |
-
paper['score'] = score
|
| 484 |
-
paper['matched'] = ', '.join(matched)
|
| 485 |
-
paper['required_matched'] = f"✓ {keyword_list[0]}, ✓ {keyword_list[1]}"
|
| 486 |
-
|
| 487 |
-
scored_papers.append(paper)
|
| 488 |
-
|
| 489 |
-
scored_papers.sort(key=lambda x: x['score'], reverse=True)
|
| 490 |
-
all_papers = scored_papers[:max_papers]
|
| 491 |
-
|
| 492 |
-
# Prepare display
|
| 493 |
-
if all_papers:
|
| 494 |
-
for i, p in enumerate(all_papers):
|
| 495 |
-
p['Rank'] = i + 1
|
| 496 |
-
|
| 497 |
-
df = pd.DataFrame(all_papers)
|
| 498 |
-
display_cols = ["Rank", "score", "Title", "Authors", "Year", "Citations", "Journal", "abstract_match", "Abstract_Short"]
|
| 499 |
-
display_df = df[display_cols]
|
| 500 |
-
|
| 501 |
-
rename_dict = {
|
| 502 |
-
"score": "Relevance",
|
| 503 |
-
"abstract_match": "In Abstract",
|
| 504 |
-
"Abstract_Short": "Abstract Preview"
|
| 505 |
-
}
|
| 506 |
-
display_df = display_df.rename(columns=rename_dict)
|
| 507 |
-
|
| 508 |
-
years_list = [p['Year'] for p in all_papers if p['Year'] != 'N/A']
|
| 509 |
-
|
| 510 |
-
# Extract metrics for display
|
| 511 |
-
total_papers = len(all_papers)
|
| 512 |
-
if years_list:
|
| 513 |
-
year_min = min(years_list)
|
| 514 |
-
year_max = max(years_list)
|
| 515 |
-
year_range_text = f"{year_min} - {year_max}"
|
| 516 |
-
else:
|
| 517 |
-
year_range_text = "N/A"
|
| 518 |
-
|
| 519 |
-
if total_papers > 0:
|
| 520 |
-
avg_relevance = sum(p.get('score', 0) for p in all_papers) / total_papers
|
| 521 |
-
else:
|
| 522 |
-
avg_relevance = 0
|
| 523 |
-
|
| 524 |
-
return display_df, all_papers, total_papers, avg_relevance, year_range_text
|
| 525 |
-
|
| 526 |
-
return pd.DataFrame(), [], 0, 0, "N/A"
|
| 527 |
-
|
| 528 |
-
def _extract_paper_info(self, work):
|
| 529 |
-
def get_authors(authorships):
|
| 530 |
-
if not authorships:
|
| 531 |
-
return "Unknown"
|
| 532 |
-
authors = []
|
| 533 |
-
for a in authorships[:3]:
|
| 534 |
-
name = a.get("author", {}).get("display_name", "")
|
| 535 |
-
if name:
|
| 536 |
-
authors.append(name)
|
| 537 |
-
return ", ".join(authors) + ("..." if len(authorships) > 3 else "")
|
| 538 |
-
|
| 539 |
-
# Get FULL abstract
|
| 540 |
abstract = ""
|
| 541 |
if work.get("abstract_inverted_index"):
|
| 542 |
words = []
|
|
@@ -547,289 +159,136 @@ class PaperSearchMobile:
|
|
| 547 |
abstract = " ".join([w[1] for w in words])
|
| 548 |
else:
|
| 549 |
abstract = "No abstract available"
|
| 550 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 551 |
return {
|
| 552 |
"Title": work.get("title", "No title"),
|
| 553 |
-
"Authors":
|
| 554 |
"Year": work.get("publication_year", "N/A"),
|
| 555 |
"Citations": work.get("cited_by_count", 0),
|
| 556 |
"Journal": (work.get("primary_location", {}).get("source") or {}).get("display_name", "Unknown"),
|
| 557 |
-
"DOI": work.get("doi", "N/A"),
|
| 558 |
-
"URL": work.get("id", "N/A"),
|
| 559 |
"Abstract": abstract,
|
| 560 |
-
"
|
|
|
|
| 561 |
}
|
| 562 |
|
| 563 |
-
def download_results(papers, fname, fmt):
|
| 564 |
-
if not papers:
|
| 565 |
-
return None, "No papers to export"
|
| 566 |
-
|
| 567 |
-
df = pd.DataFrame(papers)
|
| 568 |
-
column_order = ['Rank', 'score', 'Title', 'Authors', 'Year', 'Citations', 'Journal',
|
| 569 |
-
'DOI', 'URL', 'Abstract', 'matched', 'required_matched', 'abstract_match']
|
| 570 |
-
|
| 571 |
-
available_cols = [col for col in column_order if col in df.columns]
|
| 572 |
-
df = df[available_cols]
|
| 573 |
-
|
| 574 |
-
df = df.rename(columns={
|
| 575 |
-
'score': 'Relevance_Score',
|
| 576 |
-
'matched': 'All_Keywords_Found',
|
| 577 |
-
'required_matched': 'Required_Keywords',
|
| 578 |
-
'abstract_match': 'Keywords_In_Abstract'
|
| 579 |
-
})
|
| 580 |
-
|
| 581 |
-
timestamp = datetime.now().strftime('%Y%m%d_%H%M%S')
|
| 582 |
-
|
| 583 |
-
with tempfile.NamedTemporaryFile(mode='w', suffix=f'.{fmt.lower()}', delete=False) as tmp:
|
| 584 |
-
if fmt == "TXT":
|
| 585 |
-
filename = f"{fname}_with_abstracts_{timestamp}.txt"
|
| 586 |
-
with open(tmp.name, 'w', encoding='utf-8') as f:
|
| 587 |
-
# Write header
|
| 588 |
-
f.write("="*100 + "\n")
|
| 589 |
-
f.write(f"PAPER SEARCH RESULTS - {datetime.now().strftime('%Y-%m-%d %H:%M:%S')}\n")
|
| 590 |
-
f.write("="*100 + "\n\n")
|
| 591 |
-
|
| 592 |
-
# Write summary
|
| 593 |
-
f.write("SUMMARY\n")
|
| 594 |
-
f.write("-"*50 + "\n")
|
| 595 |
-
f.write(f"Total Papers: {len(papers)}\n")
|
| 596 |
-
f.write(f"Export Date: {datetime.now().strftime('%Y-%m-%d %H:%M:%S')}\n")
|
| 597 |
-
f.write(f"Format: {fmt}\n\n")
|
| 598 |
-
|
| 599 |
-
# Write each paper
|
| 600 |
-
for idx, paper in enumerate(papers, 1):
|
| 601 |
-
f.write(f"\n{'='*100}\n")
|
| 602 |
-
f.write(f"PAPER #{idx}\n")
|
| 603 |
-
f.write(f"{'='*100}\n")
|
| 604 |
-
|
| 605 |
-
for col in available_cols:
|
| 606 |
-
display_name = col.replace('_', ' ').title()
|
| 607 |
-
value = paper.get(col, 'N/A')
|
| 608 |
-
f.write(f"{display_name}: {value}\n")
|
| 609 |
-
|
| 610 |
-
f.write("\n")
|
| 611 |
-
|
| 612 |
-
elif fmt == "CSV":
|
| 613 |
-
filename = f"{fname}_with_abstracts_{timestamp}.csv"
|
| 614 |
-
df.to_csv(tmp.name, index=False, encoding='utf-8')
|
| 615 |
-
else: # Excel
|
| 616 |
-
filename = f"{fname}_with_abstracts_{timestamp}.xlsx"
|
| 617 |
-
with pd.ExcelWriter(tmp.name, engine='openpyxl') as writer:
|
| 618 |
-
df.to_excel(writer, sheet_name='Results', index=False)
|
| 619 |
-
|
| 620 |
-
summary_data = {
|
| 621 |
-
'Metric': ['Total Papers', 'Date Exported', 'Export Format'],
|
| 622 |
-
'Value': [len(papers), datetime.now().strftime('%Y-%m-%d %H:%M:%S'), fmt]
|
| 623 |
-
}
|
| 624 |
-
pd.DataFrame(summary_data).to_excel(writer, sheet_name='Summary', index=False)
|
| 625 |
-
|
| 626 |
-
return tmp.name, f"✅ Ready to download: {filename}"
|
| 627 |
|
| 628 |
# ============================================
|
| 629 |
-
#
|
| 630 |
# ============================================
|
|
|
|
| 631 |
def create_interface():
|
| 632 |
-
|
| 633 |
-
|
|
|
|
| 634 |
gr.HTML("""
|
| 635 |
-
<div style='text-align:
|
| 636 |
<h1><span>📱 PaperSearchPro</span></h1>
|
| 637 |
-
<p
|
| 638 |
</div>
|
| 639 |
""")
|
| 640 |
-
|
| 641 |
-
# Main content
|
| 642 |
with gr.Column(elem_classes="white-card"):
|
| 643 |
-
|
| 644 |
-
|
| 645 |
-
|
| 646 |
-
query = gr.Textbox(
|
| 647 |
-
label="🔍 Search Topic",
|
| 648 |
-
placeholder="Enter your research topic...",
|
| 649 |
-
value="photoacoustic imaging",
|
| 650 |
-
elem_classes="gr-input"
|
| 651 |
-
)
|
| 652 |
-
|
| 653 |
-
with gr.Column(scale=1):
|
| 654 |
-
max_papers = gr.Slider(
|
| 655 |
-
label="📊 Max Papers",
|
| 656 |
-
minimum=100,
|
| 657 |
-
maximum=10000,
|
| 658 |
-
value=2000,
|
| 659 |
-
step=100,
|
| 660 |
-
elem_classes="gr-slider"
|
| 661 |
-
)
|
| 662 |
-
|
| 663 |
-
# Keywords section
|
| 664 |
-
gr.HTML("""
|
| 665 |
-
<div style='margin: 1.5rem 0; background-color: transparent;'>
|
| 666 |
-
<h3 style='color: #000000; margin-bottom: 0.75rem; background-color: transparent;'>🔑 Keyword Hierarchy</h3>
|
| 667 |
-
<div>
|
| 668 |
-
<span class='keyword-badge keyword-required'>Keyword 1: REQUIRED</span>
|
| 669 |
-
<span class='keyword-badge keyword-required'>Keyword 2: REQUIRED</span>
|
| 670 |
-
<span class='keyword-badge keyword-optional'>Keyword 3+: Optional</span>
|
| 671 |
-
</div>
|
| 672 |
-
</div>
|
| 673 |
-
""")
|
| 674 |
-
|
| 675 |
keywords = gr.Textbox(
|
| 676 |
-
label="
|
| 677 |
-
|
| 678 |
-
value="blood, photoacoustics, imaging",
|
| 679 |
-
elem_classes="gr-input"
|
| 680 |
)
|
| 681 |
-
|
| 682 |
-
|
| 683 |
-
|
| 684 |
-
with gr.Column():
|
| 685 |
-
sort_by = gr.Dropdown(
|
| 686 |
-
label="Sort By",
|
| 687 |
-
choices=["relevance", "citations", "year"],
|
| 688 |
-
value="relevance",
|
| 689 |
-
elem_classes="gr-dropdown"
|
| 690 |
-
)
|
| 691 |
-
|
| 692 |
-
with gr.Column():
|
| 693 |
-
sort_order = gr.Dropdown(
|
| 694 |
-
label="Order",
|
| 695 |
-
choices=["descending", "ascending"],
|
| 696 |
-
value="descending",
|
| 697 |
-
elem_classes="gr-dropdown"
|
| 698 |
-
)
|
| 699 |
-
|
| 700 |
-
with gr.Column():
|
| 701 |
-
open_access = gr.Checkbox(
|
| 702 |
-
label="Open Access Only",
|
| 703 |
-
value=False,
|
| 704 |
-
elem_classes="gr-checkbox"
|
| 705 |
-
)
|
| 706 |
-
|
| 707 |
-
# Year range
|
| 708 |
with gr.Row():
|
| 709 |
-
|
| 710 |
-
|
| 711 |
-
|
| 712 |
-
|
| 713 |
-
|
| 714 |
-
|
| 715 |
-
elem_classes="gr-number"
|
| 716 |
-
)
|
| 717 |
-
|
| 718 |
-
with gr.Column():
|
| 719 |
-
year_to = gr.Number(
|
| 720 |
-
label="Year To",
|
| 721 |
-
value=2026,
|
| 722 |
-
minimum=1900,
|
| 723 |
-
maximum=2026,
|
| 724 |
-
elem_classes="gr-number"
|
| 725 |
-
)
|
| 726 |
-
|
| 727 |
-
# Search button
|
| 728 |
-
search_btn = gr.Button(
|
| 729 |
-
"🔍 SEARCH PAPERS",
|
| 730 |
-
variant="primary",
|
| 731 |
-
size="lg",
|
| 732 |
-
elem_classes="gr-button-primary"
|
| 733 |
-
)
|
| 734 |
-
|
| 735 |
-
# Metrics - now as display elements
|
| 736 |
with gr.Row():
|
| 737 |
-
|
| 738 |
-
|
| 739 |
-
|
| 740 |
-
|
| 741 |
-
|
| 742 |
-
|
| 743 |
-
|
| 744 |
-
|
| 745 |
-
|
| 746 |
-
|
| 747 |
-
|
| 748 |
-
|
| 749 |
-
|
| 750 |
-
results = gr.Dataframe(
|
| 751 |
-
label="📄 Results",
|
| 752 |
-
wrap=True,
|
| 753 |
-
row_count=15,
|
| 754 |
-
elem_classes="gr-dataframe"
|
| 755 |
-
)
|
| 756 |
-
papers_state = gr.State([])
|
| 757 |
-
|
| 758 |
-
# Export section
|
| 759 |
with gr.Row():
|
| 760 |
-
|
| 761 |
-
|
| 762 |
-
|
| 763 |
-
|
| 764 |
-
|
| 765 |
-
|
| 766 |
-
|
| 767 |
-
|
| 768 |
-
|
| 769 |
-
|
| 770 |
-
|
| 771 |
-
|
| 772 |
-
|
| 773 |
-
|
| 774 |
-
|
| 775 |
-
|
| 776 |
-
|
| 777 |
-
|
| 778 |
-
variant="secondary",
|
| 779 |
-
elem_classes="gr-button-secondary"
|
| 780 |
-
)
|
| 781 |
-
export_status = gr.Textbox(label="", visible=True)
|
| 782 |
-
download_file = gr.File(label="Download Link", visible=False)
|
| 783 |
-
|
| 784 |
-
# Info box
|
| 785 |
-
gr.HTML("""
|
| 786 |
-
<div class='info-box'>
|
| 787 |
-
<strong>📌 Note:</strong> Downloaded files include FULL abstracts.
|
| 788 |
-
<strong>TXT</strong> format includes formatted text with summaries.
|
| 789 |
-
<strong>CSV</strong> format is comma-separated values.
|
| 790 |
-
<strong>Excel</strong> format includes a Summary sheet with metadata.
|
| 791 |
-
</div>
|
| 792 |
-
""")
|
| 793 |
-
|
| 794 |
-
# Initialize searcher
|
| 795 |
-
searcher = PaperSearchMobile()
|
| 796 |
-
|
| 797 |
-
# Search function
|
| 798 |
-
def search_wrapper(query, keywords, sort_by, sort_order, max_papers, year_from, year_to, open_access):
|
| 799 |
-
df, papers, total, avg, year_range = searcher.search_papers(
|
| 800 |
-
query, keywords, sort_by, sort_order, max_papers, year_from, year_to, open_access
|
| 801 |
-
)
|
| 802 |
-
|
| 803 |
-
total_md = f"**{total}**"
|
| 804 |
-
avg_md = f"**{avg:.1f}**"
|
| 805 |
-
year_md = f"**{year_range}**"
|
| 806 |
-
|
| 807 |
-
return df, papers, total_md, avg_md, year_md
|
| 808 |
-
|
| 809 |
search_btn.click(
|
| 810 |
search_wrapper,
|
| 811 |
-
inputs=[query, keywords,
|
| 812 |
-
outputs=[results,
|
| 813 |
)
|
| 814 |
-
|
| 815 |
-
|
| 816 |
-
|
| 817 |
if not papers:
|
| 818 |
return None, "No papers to export", gr.File(visible=False)
|
| 819 |
-
|
| 820 |
-
|
| 821 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 822 |
export_btn.click(
|
| 823 |
-
|
| 824 |
-
inputs=[
|
| 825 |
outputs=[download_file, export_status, download_file]
|
| 826 |
)
|
| 827 |
-
|
| 828 |
return demo
|
| 829 |
|
|
|
|
| 830 |
# ============================================
|
| 831 |
-
# MAIN
|
| 832 |
# ============================================
|
|
|
|
| 833 |
if __name__ == "__main__":
|
| 834 |
demo = create_interface()
|
| 835 |
-
demo.launch(
|
|
|
|
| 1 |
"""
|
| 2 |
+
PaperSearchPro - FULL Professional Version
|
| 3 |
+
Hierarchical Keyword Search + Export + Responsive UI
|
| 4 |
"""
|
| 5 |
|
| 6 |
import requests
|
|
|
|
| 8 |
import time
|
| 9 |
from datetime import datetime
|
| 10 |
import gradio as gr
|
|
|
|
| 11 |
import os
|
| 12 |
|
| 13 |
+
# ============================================
|
| 14 |
+
# CLEAN RESPONSIVE CSS
|
| 15 |
+
# ============================================
|
| 16 |
+
|
| 17 |
custom_css = """
|
| 18 |
@import url('https://fonts.googleapis.com/css2?family=Inter:wght@400;500;600;700&display=swap');
|
| 19 |
|
| 20 |
:root {
|
| 21 |
--primary: #2563eb;
|
|
|
|
| 22 |
--secondary: #7c3aed;
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 23 |
--border: #e5e7eb;
|
| 24 |
+
--bg-soft: #f9fafb;
|
| 25 |
+
--text-main: #111827;
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 26 |
}
|
| 27 |
|
| 28 |
+
body, .gradio-container {
|
| 29 |
+
font-family: 'Inter', sans-serif !important;
|
| 30 |
+
background-color: #ffffff !important;
|
| 31 |
+
color: var(--text-main) !important;
|
|
|
|
|
|
|
| 32 |
}
|
| 33 |
|
| 34 |
+
.gradio-container {
|
| 35 |
+
max-width: 1600px !important;
|
| 36 |
+
margin: auto !important;
|
| 37 |
}
|
| 38 |
|
|
|
|
| 39 |
.white-card {
|
| 40 |
+
background: #ffffff !important;
|
|
|
|
|
|
|
| 41 |
border: 1px solid var(--border) !important;
|
| 42 |
+
border-radius: 12px !important;
|
| 43 |
+
padding: 2rem !important;
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 44 |
}
|
| 45 |
|
| 46 |
h1 span {
|
| 47 |
background: linear-gradient(135deg, var(--primary), var(--secondary));
|
| 48 |
-webkit-background-clip: text;
|
| 49 |
-webkit-text-fill-color: transparent;
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 50 |
}
|
| 51 |
|
| 52 |
+
.metric-value {
|
| 53 |
+
font-size: 2rem !important;
|
| 54 |
+
font-weight: 700 !important;
|
| 55 |
+
color: var(--primary) !important;
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 56 |
}
|
| 57 |
+
"""
|
| 58 |
|
| 59 |
+
# ============================================
|
| 60 |
+
# SEARCH ENGINE
|
| 61 |
+
# ============================================
|
| 62 |
|
| 63 |
+
class PaperSearchPro:
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 64 |
|
| 65 |
+
def __init__(self):
|
| 66 |
+
self.base_url = "https://api.openalex.org/works"
|
| 67 |
+
self.per_page = 200
|
|
|
|
| 68 |
|
| 69 |
+
def search_papers(self, query, keywords, max_papers, year_from, year_to, open_access):
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 70 |
|
| 71 |
+
filters = []
|
| 72 |
+
if year_from:
|
| 73 |
+
filters.append(f"publication_year:>{int(year_from)-1}")
|
| 74 |
+
if year_to:
|
| 75 |
+
filters.append(f"publication_year:<{int(year_to)+1}")
|
| 76 |
+
if open_access:
|
| 77 |
+
filters.append("open_access.is_oa:true")
|
| 78 |
|
| 79 |
+
filter_str = ",".join(filters) if filters else None
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 80 |
|
| 81 |
+
all_papers = []
|
| 82 |
+
page = 1
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 83 |
|
| 84 |
+
while len(all_papers) < max_papers:
|
| 85 |
+
params = {
|
| 86 |
+
"search": query,
|
| 87 |
+
"per-page": self.per_page,
|
| 88 |
+
"page": page
|
| 89 |
+
}
|
| 90 |
|
| 91 |
+
if filter_str:
|
| 92 |
+
params["filter"] = filter_str
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 93 |
|
| 94 |
+
response = requests.get(self.base_url, params=params, timeout=20)
|
| 95 |
+
data = response.json()
|
| 96 |
+
results = data.get("results", [])
|
|
|
|
|
|
|
| 97 |
|
| 98 |
+
if not results:
|
| 99 |
+
break
|
|
|
|
|
|
|
|
|
|
| 100 |
|
| 101 |
+
for work in results:
|
| 102 |
+
paper = self.extract_info(work)
|
| 103 |
+
all_papers.append(paper)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 104 |
|
| 105 |
+
page += 1
|
| 106 |
+
time.sleep(0.2)
|
|
|
|
| 107 |
|
| 108 |
+
# ===============================
|
| 109 |
+
# HIERARCHICAL KEYWORD FILTERING
|
| 110 |
+
# ===============================
|
|
|
|
|
|
|
|
|
|
|
|
|
| 111 |
|
| 112 |
+
keyword_list = [k.strip().lower() for k in keywords.split(",") if k.strip()]
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 113 |
|
| 114 |
+
if len(keyword_list) >= 2:
|
| 115 |
+
filtered = []
|
|
|
|
|
|
|
|
|
|
| 116 |
|
| 117 |
+
for p in all_papers:
|
| 118 |
+
combined = f"{p['Title']} {p['Abstract']} {p['Authors']}".lower()
|
|
|
|
| 119 |
|
| 120 |
+
# first 2 keywords REQUIRED
|
| 121 |
+
if keyword_list[0] not in combined or keyword_list[1] not in combined:
|
| 122 |
+
continue
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 123 |
|
| 124 |
+
score = 2
|
| 125 |
+
matched = [keyword_list[0], keyword_list[1]]
|
|
|
|
|
|
|
| 126 |
|
| 127 |
+
for kw in keyword_list[2:]:
|
| 128 |
+
if kw in combined:
|
| 129 |
+
score += 1
|
| 130 |
+
matched.append(kw)
|
| 131 |
|
| 132 |
+
p["Relevance"] = score
|
| 133 |
+
p["Matched Keywords"] = ", ".join(matched)
|
|
|
|
|
|
|
| 134 |
|
| 135 |
+
filtered.append(p)
|
|
|
|
|
|
|
|
|
|
| 136 |
|
| 137 |
+
filtered.sort(key=lambda x: x["Relevance"], reverse=True)
|
| 138 |
+
all_papers = filtered[:max_papers]
|
|
|
|
|
|
|
| 139 |
|
| 140 |
+
total = len(all_papers)
|
| 141 |
+
avg_rel = sum(p.get("Relevance", 0) for p in all_papers) / total if total else 0
|
| 142 |
+
years = [p["Year"] for p in all_papers if p["Year"] != "N/A"]
|
| 143 |
+
year_range = f"{min(years)} - {max(years)}" if years else "N/A"
|
|
|
|
| 144 |
|
| 145 |
+
df = pd.DataFrame(all_papers)
|
|
|
|
|
|
|
| 146 |
|
| 147 |
+
return df, all_papers, total, avg_rel, year_range
|
|
|
|
|
|
|
| 148 |
|
| 149 |
+
def extract_info(self, work):
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 150 |
|
| 151 |
+
# Rebuild abstract
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 152 |
abstract = ""
|
| 153 |
if work.get("abstract_inverted_index"):
|
| 154 |
words = []
|
|
|
|
| 159 |
abstract = " ".join([w[1] for w in words])
|
| 160 |
else:
|
| 161 |
abstract = "No abstract available"
|
| 162 |
+
|
| 163 |
+
authors = ", ".join(
|
| 164 |
+
a.get("author", {}).get("display_name", "")
|
| 165 |
+
for a in work.get("authorships", [])[:3]
|
| 166 |
+
)
|
| 167 |
+
|
| 168 |
return {
|
| 169 |
"Title": work.get("title", "No title"),
|
| 170 |
+
"Authors": authors,
|
| 171 |
"Year": work.get("publication_year", "N/A"),
|
| 172 |
"Citations": work.get("cited_by_count", 0),
|
| 173 |
"Journal": (work.get("primary_location", {}).get("source") or {}).get("display_name", "Unknown"),
|
|
|
|
|
|
|
| 174 |
"Abstract": abstract,
|
| 175 |
+
"Relevance": 0,
|
| 176 |
+
"Matched Keywords": ""
|
| 177 |
}
|
| 178 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 179 |
|
| 180 |
# ============================================
|
| 181 |
+
# INTERFACE
|
| 182 |
# ============================================
|
| 183 |
+
|
| 184 |
def create_interface():
|
| 185 |
+
|
| 186 |
+
with gr.Blocks(title="PaperSearchPro", css=custom_css) as demo:
|
| 187 |
+
|
| 188 |
gr.HTML("""
|
| 189 |
+
<div style='text-align:center; padding:2rem 0'>
|
| 190 |
<h1><span>📱 PaperSearchPro</span></h1>
|
| 191 |
+
<p>Professional Academic Paper Search</p>
|
| 192 |
</div>
|
| 193 |
""")
|
| 194 |
+
|
|
|
|
| 195 |
with gr.Column(elem_classes="white-card"):
|
| 196 |
+
|
| 197 |
+
query = gr.Textbox(label="Search Topic", value="photoacoustic imaging")
|
| 198 |
+
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 199 |
keywords = gr.Textbox(
|
| 200 |
+
label="Keywords (first 2 REQUIRED)",
|
| 201 |
+
value="blood, photoacoustics, imaging"
|
|
|
|
|
|
|
| 202 |
)
|
| 203 |
+
|
| 204 |
+
max_papers = gr.Slider(100, 5000, value=1000, step=100, label="Max Papers")
|
| 205 |
+
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 206 |
with gr.Row():
|
| 207 |
+
year_from = gr.Number(value=2000, label="Year From")
|
| 208 |
+
year_to = gr.Number(value=2026, label="Year To")
|
| 209 |
+
open_access = gr.Checkbox(label="Open Access Only")
|
| 210 |
+
|
| 211 |
+
search_btn = gr.Button("🔍 SEARCH PAPERS", variant="primary")
|
| 212 |
+
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 213 |
with gr.Row():
|
| 214 |
+
total_display = gr.Markdown("**0**", elem_classes="metric-value")
|
| 215 |
+
avg_display = gr.Markdown("**0.0**", elem_classes="metric-value")
|
| 216 |
+
year_display = gr.Markdown("**N/A**", elem_classes="metric-value")
|
| 217 |
+
|
| 218 |
+
results = gr.Dataframe(row_count=15)
|
| 219 |
+
state = gr.State([])
|
| 220 |
+
|
| 221 |
+
# ==========================
|
| 222 |
+
# EXPORT SECTION
|
| 223 |
+
# ==========================
|
| 224 |
+
|
| 225 |
+
gr.Markdown("### 📥 Export Results")
|
| 226 |
+
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 227 |
with gr.Row():
|
| 228 |
+
filename = gr.Textbox(label="Filename", value="papers_results")
|
| 229 |
+
format_type = gr.Dropdown(
|
| 230 |
+
label="Format",
|
| 231 |
+
choices=["TXT", "CSV", "Excel"],
|
| 232 |
+
value="TXT"
|
| 233 |
+
)
|
| 234 |
+
|
| 235 |
+
export_btn = gr.Button("Download Results", variant="secondary")
|
| 236 |
+
|
| 237 |
+
export_status = gr.Markdown("")
|
| 238 |
+
download_file = gr.File(visible=False)
|
| 239 |
+
|
| 240 |
+
searcher = PaperSearchPro()
|
| 241 |
+
|
| 242 |
+
def search_wrapper(q, k, m, yf, yt, oa):
|
| 243 |
+
df, papers, total, avg, yr = searcher.search_papers(q, k, m, yf, yt, oa)
|
| 244 |
+
return df, papers, f"**{total}**", f"**{avg:.2f}**", f"**{yr}**"
|
| 245 |
+
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 246 |
search_btn.click(
|
| 247 |
search_wrapper,
|
| 248 |
+
inputs=[query, keywords, max_papers, year_from, year_to, open_access],
|
| 249 |
+
outputs=[results, state, total_display, avg_display, year_display]
|
| 250 |
)
|
| 251 |
+
|
| 252 |
+
def export_results(papers, fname, fmt):
|
| 253 |
+
|
| 254 |
if not papers:
|
| 255 |
return None, "No papers to export", gr.File(visible=False)
|
| 256 |
+
|
| 257 |
+
df = pd.DataFrame(papers)
|
| 258 |
+
timestamp = datetime.now().strftime("%Y%m%d_%H%M%S")
|
| 259 |
+
|
| 260 |
+
if fmt == "CSV":
|
| 261 |
+
path = f"{fname}_{timestamp}.csv"
|
| 262 |
+
df.to_csv(path, index=False)
|
| 263 |
+
|
| 264 |
+
elif fmt == "Excel":
|
| 265 |
+
path = f"{fname}_{timestamp}.xlsx"
|
| 266 |
+
df.to_excel(path, index=False)
|
| 267 |
+
|
| 268 |
+
else:
|
| 269 |
+
path = f"{fname}_{timestamp}.txt"
|
| 270 |
+
with open(path, "w", encoding="utf-8") as f:
|
| 271 |
+
for i, row in df.iterrows():
|
| 272 |
+
f.write("="*80 + "\n")
|
| 273 |
+
for col in df.columns:
|
| 274 |
+
f.write(f"{col}: {row[col]}\n")
|
| 275 |
+
f.write("\n")
|
| 276 |
+
|
| 277 |
+
return path, f"✅ File ready: {path}", gr.File(visible=True)
|
| 278 |
+
|
| 279 |
export_btn.click(
|
| 280 |
+
export_results,
|
| 281 |
+
inputs=[state, filename, format_type],
|
| 282 |
outputs=[download_file, export_status, download_file]
|
| 283 |
)
|
| 284 |
+
|
| 285 |
return demo
|
| 286 |
|
| 287 |
+
|
| 288 |
# ============================================
|
| 289 |
+
# MAIN
|
| 290 |
# ============================================
|
| 291 |
+
|
| 292 |
if __name__ == "__main__":
|
| 293 |
demo = create_interface()
|
| 294 |
+
demo.launch(inbrowser=True, height=1000)
|