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SubstrateCommons: the organisation page, rendered from the hub's family index

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@@ -22,10 +22,10 @@ A replay refuses what the pack cannot serve (a waveform beyond its temporal band
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  | family | what it is | source | reference it reproduces | packs | licence |
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  |---|---|---|---|---|---|
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- | [canonical-pores](https://huggingface.co/datasets/SubstrateCommons/canonical-pores) | Single cylinders, spheres and planes from 0.1 to 20 µm, one walk per size at a certified floor: the closed-form references every replay is checked against, and the compartments dmipy-fit's replay models read. | dmipy-sim's analytic geometries; the fit-side models are Fick et al., dmipy (Front. Neuroinform. 2019). | analytic (the restricted-diffusion series of each shape) | 590 (25.7 GB) | CC-BY-4.0 (ours) |
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  | [disco-replay](https://huggingface.co/datasets/SubstrateCommons/disco-replay) | The DiSCo 1 mm³ strand phantom (12,196 strands) walked in voxel blocks and stored as a columnar image: one voxel, one waveform or the whole volume, read by reference. | Rafael-Patino et al., Data in Brief 38:107429 (2021), doi:10.1016/j.dib.2021.107429. | A: the released MC/DC DWI volume (4 shells, 364 measurements) on the same strands | 1 | CC-BY-4.0 |
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  | [imperial-rocks](https://huggingface.co/datasets/SubstrateCommons/imperial-rocks) | Micro-CT sand packs walked on their own voxels through the label-volume producer: the surface-relaxation reference outside the brain, replayed as a CPMG decay. | Dong & Blunt 2009 images (Imperial College, Figshare); Talabi 2008 thesis for the random-walk and measured CPMG. | A: Talabi's random walk on the exact released images and measured CPMG on the same sand (relaxivity fitted by him) | 2 | CC-BY-4.0 images; thesis CC-BY-ND (numbers cited) |
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- | [ling-sand-packs](https://huggingface.co/datasets/SubstrateCommons/ling-sand-packs) | Quartz and garnet sand packs imaged by micro-CT after the CPMG was measured on the same resin-set packs: the same-object rock reference. | Ling et al., Transp. Porous Media (2022), doi:10.1007/s11242-022-01764-w; figshare 10.6084/m9.figshare.17161730. | A: measured and simulated CPMG on the same packs, both released | 5 | CC-BY-4.0 |
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  | [parity-fixtures](https://huggingface.co/datasets/SubstrateCommons/parity-fixtures) | Cross-engine fixtures: single undulating axons released by MC/DC with the raw DWI their engine produced, and Disimpy's cylinder against the MISST matrix-formalism signal. | Rafael-Patino et al., Front. Neuroinform. 2020 (Robust-Monte-Carlo-Simulations, LGPL-2.1); Kerkelä et al., JOSS 2020 (Disimpy, MIT). | A: their released signals at their scheme, compared per measurement within the two Monte-Carlo floors | 3 | LGPL-2.1 / MIT sources; packs CC-BY-4.0 |
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  | [winther-g6-axons](https://huggingface.co/datasets/SubstrateCommons/winther-g6-axons) | 29 real axons segmented from X-ray nano-holotomography of a vervet brain, walked with their myelin sheath as a susceptibility source: positions, occupancy, wall contact and the field's path integral in one pack each. | Winther et al., Sci. Rep. 14:29636 (2024), doi:10.1038/s41598-024-79043-5; morphology from resources.drcmr.dk. | A: per-axon Monte-Carlo signals and B-fields released with the paper; ex vivo PGSE on the same tissue block | 29 (2.7 GB) | none stated on the host (cite the paper); packs CC-BY-4.0 |
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  | family | what it is | source | reference it reproduces | packs | licence |
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  |---|---|---|---|---|---|
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+ | [canonical-pores](https://huggingface.co/datasets/SubstrateCommons/canonical-pores) | Single cylinders, spheres and planes from 0.1 to 20 µm, one walk per size at a certified floor: the closed-form references every replay is checked against, and the compartments dmipy-fit's replay models read. | dmipy-sim's analytic geometries; the fit-side models are Fick et al., dmipy (Front. Neuroinform. 2019). | analytic (the restricted-diffusion series of each shape) | 596 (25.7 GB) | CC-BY-4.0 (ours) |
26
  | [disco-replay](https://huggingface.co/datasets/SubstrateCommons/disco-replay) | The DiSCo 1 mm³ strand phantom (12,196 strands) walked in voxel blocks and stored as a columnar image: one voxel, one waveform or the whole volume, read by reference. | Rafael-Patino et al., Data in Brief 38:107429 (2021), doi:10.1016/j.dib.2021.107429. | A: the released MC/DC DWI volume (4 shells, 364 measurements) on the same strands | 1 | CC-BY-4.0 |
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  | [imperial-rocks](https://huggingface.co/datasets/SubstrateCommons/imperial-rocks) | Micro-CT sand packs walked on their own voxels through the label-volume producer: the surface-relaxation reference outside the brain, replayed as a CPMG decay. | Dong & Blunt 2009 images (Imperial College, Figshare); Talabi 2008 thesis for the random-walk and measured CPMG. | A: Talabi's random walk on the exact released images and measured CPMG on the same sand (relaxivity fitted by him) | 2 | CC-BY-4.0 images; thesis CC-BY-ND (numbers cited) |
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+ | [ling-sand-packs](https://huggingface.co/datasets/SubstrateCommons/ling-sand-packs) | Quartz and garnet sand packs imaged by micro-CT after the CPMG was measured on the same resin-set packs: the same-object rock reference. | Ling et al., Transp. Porous Media (2022), doi:10.1007/s11242-022-01764-w; figshare 10.6084/m9.figshare.17161730. | B: measured CPMG on the same packs, released as raw trains; the paper's own random walk is a figure, not a number; 3 of 5 packs are two-mineral mixtures the contact channel cannot yet serve (blocked) | 5 | CC-BY-4.0 |
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  | [parity-fixtures](https://huggingface.co/datasets/SubstrateCommons/parity-fixtures) | Cross-engine fixtures: single undulating axons released by MC/DC with the raw DWI their engine produced, and Disimpy's cylinder against the MISST matrix-formalism signal. | Rafael-Patino et al., Front. Neuroinform. 2020 (Robust-Monte-Carlo-Simulations, LGPL-2.1); Kerkelä et al., JOSS 2020 (Disimpy, MIT). | A: their released signals at their scheme, compared per measurement within the two Monte-Carlo floors | 3 | LGPL-2.1 / MIT sources; packs CC-BY-4.0 |
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  | [winther-g6-axons](https://huggingface.co/datasets/SubstrateCommons/winther-g6-axons) | 29 real axons segmented from X-ray nano-holotomography of a vervet brain, walked with their myelin sheath as a susceptibility source: positions, occupancy, wall contact and the field's path integral in one pack each. | Winther et al., Sci. Rep. 14:29636 (2024), doi:10.1038/s41598-024-79043-5; morphology from resources.drcmr.dk. | A: per-axon Monte-Carlo signals and B-fields released with the paper; ex vivo PGSE on the same tissue block | 29 (2.7 GB) | none stated on the host (cite the paper); packs CC-BY-4.0 |
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