This commit completes the transition of DeepBoner to a dedicated Sexual Health Research Agent by removing all references to "general" and "drug repurposing" domains. Key changes include:
- Updated domain defaults to exclusively use "sexual_health".
- Replaced all example queries and documentation to reflect a focus on sexual health topics.
- Removed any lingering references to non-sexual health concepts in code and tests.
- Ensured all tests are aligned with the new domain focus, passing successfully.
This change reinforces the project's identity and simplifies the codebase, enhancing clarity and usability for users focused on sexual health research.
Closes #89.
feat(SPEC_11): narrow scope to sexual health only
BREAKING CHANGE: Remove GENERAL and DRUG_REPURPOSING domains
DeepBoner is now a focused Sexual Health Research Specialist, not a
general-purpose research agent.
Changes:
- Remove ResearchDomain.GENERAL and ResearchDomain.DRUG_REPURPOSING
- Remove GENERAL_CONFIG and DRUG_REPURPOSING_CONFIG from domain.py
- Set DEFAULT_DOMAIN = ResearchDomain.SEXUAL_HEALTH
- Update Gradio examples (remove Metformin/Alzheimer's)
- New example: "Testosterone therapy for hypoactive sexual desire disorder?"
- Hide domain dropdown (only one option now)
- Update all domain-related tests
Closes #89
* feat: implement SPEC_10 domain-agnostic refactor
* fix: complete SPEC_10 audit - license + HierarchicalOrchestrator domain
License Fixes:
- LICENSE: Fix copyright "Antibody Training Pipeline ESM" → "DeepBoner Contributors"
- pyproject.toml: Add missing license = "Apache-2.0" field
- README.md: Fix frontmatter license: mit → apache-2.0
Domain Threading Fixes:
- hierarchical.py: Add domain param to __init__ and pass to ResearchTeam
- factory.py: Pass domain to HierarchicalOrchestrator
All 237 tests pass. Domain now properly threaded through all orchestrators.
* test: enhance domain handling in orchestrators and judges
- Updated unit tests for `configure_orchestrator` to include mock mode and free tier scenarios, ensuring the domain is correctly passed to handlers.
- Refactored tests for `JudgeHandler` to mock model retrieval, allowing for domain acceptance without API key requirements.
- Improved `AdvancedOrchestrator` tests to mock API key validation and ensure domain handling i…
