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18 days ago
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Deploy a4e181b
github-actions[bot]Merge pull request #203 from WINTER4000/feat/yeast-integration Source: https://github.com/WINTER4000/turingDNA/commit/a4e181b857221e5380d30a3f040ab59819a91badd87fc13
19 days ago
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Deploy 8a1c128
github-actions[bot]Merge pull request #202 from WINTER4000/feat/yeast-hr-assembly Source: https://github.com/WINTER4000/turingDNA/commit/8a1c12874a02a62a2056018a46f34b02ac5cb1ac03fd087
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Deploy 4aa3582
github-actions[bot]Orchestrator: dial reasoning effort down from the model's own "medium" Source: https://github.com/WINTER4000/turingDNA/commit/4aa358229bcbb9283ed7d634b4555f187a44e35811ad3b9
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Plasmid Studio M3 + M4: sequence editor + cloning simulation
Tengo Gzirishvili +1: Claude Opus 4.8M3 — Sequence editor (new "Sequence" view tab): - Feature-colored sequence with position ruler; runs grouped by feature so even big plasmids render cheaply (capped at 60 kb). - Find (forward + reverse-complement) with match count + next/prev, highlights + jumps; selection via From/To coords or clicking a feature. - Operations on the selection: Copy, Copy rev-comp, Translate (client genetic code), Annotate (add a feature), Delete, Insert at position, Reverse- complement the whole plasmid. Edits rewrite the sequence, REMAP feature coordinates (delete/insert shift, revcomp flips), and re-scan restriction. M4 — Cloning simulation (dee/core/cloning.py + /api/plasmid/clone + "Clone & assemble" panel): - Gibson / overlap assembly: auto-orders fragments by terminal overlap; native overlaps assemble scarlessly, bare junctions get homology arms DESIGNED into per-fragment primers (annealing core via the codon engine + the neighbour's tail). Circular or linear. - Golden Gate (Type…ec0167c