data/prefix_codes.csv

prefix,code_prefix,RBP,cell_line
NSUN2_K562,BB,NSUN2,K562
SBDS_K562,BD,SBDS,K562
SSB_K562,BE,SSB,K562
SSB_HepG2,BF,SSB,HepG2
SLBP_K562,BH,SLBP,K562
ZC3H8_K562,BI,ZC3H8,K562
EIF3G_K562,BJ,EIF3G,K562
NPM1_K562,BK,NPM1,K562
PUS1_K562,BL,PUS1,K562
LARP7_K562,BM,LARP7,K562
HNRNPA1_HepG2,BO,HNRNPA1,HepG2
HNRNPUL1_K562,BP,HNRNPUL1,K562
BCCIP_HepG2,BQ,BCCIP,HepG2
XRCC6_HepG2,BR,XRCC6,HepG2
NIP7_HepG2,BS,NIP7,HepG2
SERBP1_K562,BU,SERBP1,K562
ABCF1_K562,BV,ABCF1,K562
HNRNPU_adrenal_gland,BW,HNRNPU,adrenal
LARP7_HepG2,BX,LARP7,HepG2
SRSF7_K562,BY,SRSF7,K562
RPS11_K562,BZ,RPS11,K562
GRSF1_HepG2,DB,GRSF1,HepG2
POLR2G_HepG2,DD,POLR2G,HepG2
EXOSC5_HepG2,DE,EXOSC5,HepG2
HNRNPA1_K562,DF,HNRNPA1,K562
DGCR8_K562,DH,DGCR8,K562
YWHAG_K562,DI,YWHAG,K562
CPSF6_K562,DJ,CPSF6,K562
SRSF7_HepG2,DK,SRSF7,HepG2
PPIL4_K562,DL,PPIL4,K562
HLTF_K562,DM,HLTF,K562
UTP18_K562,DO,UTP18,K562
HNRNPC_K562,DP,HNRNPC,K562
TROVE2_K562,DQ,TROVE2,K562
HNRNPU_HepG2,DR,HNRNPU,HepG2
TAF15_K562,DS,TAF15,K562
WDR43_HepG2,DU,WDR43,HepG2
SAFB_K562,DV,SAFB,K562
SDAD1_K562,DW,SDAD1,K562
GNL3_K562,DX,GNL3,K562
TRA2A_HepG2,DY,TRA2A,HepG2
RBM22_K562,DZ,RBM22,K562
HNRNPU_K562,EB,HNRNPU,K562
DDX52_HepG2,ED,DDX52,HepG2
DDX21_K562,EE,DDX21,K562
DHX30_HepG2,EF,DHX30,HepG2
NCBP2_K562,EH,NCBP2,K562
SAFB_HepG2,EI,SAFB,HepG2
DDX42_K562,EJ,DDX42,K562
UTP18_HepG2,EK,UTP18,HepG2
DGCR8_HepG2,EL,DGCR8,HepG2
AKAP1_K562,EM,AKAP1,K562
U2AF1_K562,EO,U2AF1,K562
APOBEC3C_K562,EP,APOBEC3C,K562
TIA1_HepG2,EQ,TIA1,HepG2
CPEB4_K562,ER,CPEB4,K562
FKBP4_HepG2,ES,FKBP4,HepG2
U2AF1_HepG2,EU,U2AF1,HepG2
TIAL1_HepG2,EV,TIAL1,HepG2
XRN2_K562,EW,XRN2,K562
SRSF9_HepG2,EX,SRSF9,HepG2
IGF2BP3_HepG2,EY,IGF2BP3,HepG2
FTO_HepG2,EZ,FTO,HepG2
TBRG4_K562,FB,TBRG4,K562
KHDRBS1_K562,FD,KHDRBS1,K562
NOLC1_HepG2,FE,NOLC1,HepG2
AATF_K562,FF,AATF,K562
FUBP3_HepG2,FH,FUBP3,HepG2
HNRNPK_K562,FI,HNRNPK,K562
NOLC1_K562,FJ,NOLC1,K562
FXR1_K562,FK,FXR1,K562
PCBP1_K562,FL,PCBP1,K562
TRA2A_K562,FM,TRA2A,K562
SMNDC1_HepG2,FO,SMNDC1,HepG2
PCBP1_HepG2,FP,PCBP1,HepG2
SUPV3L1_HepG2,FQ,SUPV3L1,HepG2
SUPV3L1_K562,FR,SUPV3L1,K562
WDR43_K562,FS,WDR43,K562
FTO_K562,FU,FTO,K562
HNRNPUL1_HepG2,FV,HNRNPUL1,HepG2
ZC3H11A_HepG2,FW,ZC3H11A,HepG2
PHF6_K562,FX,PHF6,K562
CSTF2_HepG2,FY,CSTF2,HepG2
STAU2_HepG2,FZ,STAU2,HepG2
ZRANB2_K562,HB,ZRANB2,K562
QKI_K562,HD,QKI,K562
DDX51_K562,HE,DDX51,K562
FUS_HepG2,HF,FUS,HepG2
AKAP1_HepG2,HH,AKAP1,HepG2
DKC1_HepG2,HI,DKC1,HepG2
SMNDC1_K562,HJ,SMNDC1,K562
SRSF1_K562,HK,SRSF1,K562
SRSF1_HepG2,HL,SRSF1,HepG2
U2AF2_K562,HM,U2AF2,K562
DDX59_HepG2,HO,DDX59,HepG2
EIF4G2_K562,HP,EIF4G2,K562
TAF15_HepG2,HQ,TAF15,HepG2
TROVE2_HepG2,HR,TROVE2,HepG2
ZC3H11A_K562,HS,ZC3H11A,K562
WDR3_K562,HU,WDR3,K562
LSM11_K562,HV,LSM11,K562
AKAP8L_K562,HW,AKAP8L,K562
NOL12_HepG2,HX,NOL12,HepG2
LIN28B_K562,HY,LIN28B,K562
DROSHA_HepG2,HZ,DROSHA,HepG2
WRN_K562,IB,WRN,K562
DDX52_K562,ID,DDX52,K562
CDC40_HepG2,IE,CDC40,HepG2
RBM5_HepG2,IF,RBM5,HepG2
LIN28B_HepG2,IH,LIN28B,HepG2
TARDBP_K562,II,TARDBP,K562
FASTKD2_K562,IJ,FASTKD2,K562
XRCC6_K562,IK,XRCC6,K562
SUB1_HepG2,IL,SUB1,HepG2
GTF2F1_HepG2,IM,GTF2F1,HepG2
ILF3_HepG2,IO,ILF3,HepG2
HNRNPL_K562,IP,HNRNPL,K562
MATR3_K562,IQ,MATR3,K562
DHX30_K562,IR,DHX30,K562
GTF2F1_K562,IS,GTF2F1,K562
FUS_K562,IU,FUS,K562
UPF1_HepG2,IV,UPF1,HepG2
AGGF1_HepG2,IW,AGGF1,HepG2
SAFB2_K562,IX,SAFB2,K562
RBFOX2_K562,IY,RBFOX2,K562
SND1_HepG2,IZ,SND1,HepG2
YBX3_HepG2,JB,YBX3,HepG2
SF3B4_HepG2,JD,SF3B4,HepG2
MTPAP_K562,JE,MTPAP,K562
HNRNPK_HepG2,JF,HNRNPK,HepG2
DDX3X_K562,JH,DDX3X,K562
IGF2BP2_K562,JI,IGF2BP2,K562
METAP2_K562,JJ,METAP2,K562
ILF3_K562,JK,ILF3,K562
XPO5_HepG2,JL,XPO5,HepG2
NCBP2_HepG2,JM,NCBP2,HepG2
LSM11_HepG2,JO,LSM11,HepG2
PABPN1_HepG2,JP,PABPN1,HepG2
FXR2_K562,JQ,FXR2,K562
IGF2BP1_HepG2,JR,IGF2BP1,HepG2
LARP4_HepG2,JS,LARP4,HepG2
SLTM_K562,JU,SLTM,K562
RPS3_K562,JV,RPS3,K562
DDX55_K562,JW,DDX55,K562
UCHL5_HepG2,JX,UCHL5,HepG2
SDAD1_HepG2,JY,SDAD1,HepG2
DDX6_K562,JZ,DDX6,K562
HNRNPM_K562,KB,HNRNPM,K562
RBFOX2_HepG2,KD,RBFOX2,HepG2
AGGF1_K562,KE,AGGF1,K562
RBM15_HepG2,KF,RBM15,HepG2
PUM2_K562,KH,PUM2,K562
EIF3D_HepG2,KI,EIF3D,HepG2
FMR1_K562,KJ,FMR1,K562
FXR2_HepG2,KK,FXR2,HepG2
SND1_K562,KL,SND1,K562
LARP4_K562,KM,LARP4,K562
SF3A3_HepG2,KO,SF3A3,HepG2
NIPBL_K562,KP,NIPBL,K562
PUM1_K562,KQ,PUM1,K562
DDX55_HepG2,KR,DDX55,HepG2
SFPQ_HepG2,KS,SFPQ,HepG2
XRN2_HepG2,KU,XRN2,HepG2
PTBP1_K562,KV,PTBP1,K562
EXOSC5_K562,KW,EXOSC5,K562
ZNF800_K562,KX,ZNF800,K562
EWSR1_K562,KY,EWSR1,K562
GPKOW_K562,KZ,GPKOW,K562
IGF2BP1_K562,LB,IGF2BP1,K562
KHSRP_HepG2,LD,KHSRP,HepG2
SLTM_HepG2,LE,SLTM,HepG2
RBM22_HepG2,LF,RBM22,HepG2
DROSHA_K562,LH,DROSHA,K562
RPS3_HepG2,LI,RPS3,HepG2
TIA1_K562,LJ,TIA1,K562
FAM120A_K562,LK,FAM120A,K562
QKI_HepG2,LL,QKI,HepG2
NKRF_HepG2,LM,NKRF,HepG2
G3BP1_HepG2,LO,G3BP1,HepG2
UPF1_K562,LP,UPF1,K562
ZNF800_HepG2,LQ,ZNF800,HepG2
MATR3_HepG2,LR,MATR3,HepG2
GRWD1_K562,LS,GRWD1,K562
NONO_K562,LU,NONO,K562
FASTKD2_HepG2,LV,FASTKD2,HepG2
PCBP2_HepG2,LW,PCBP2,HepG2
GEMIN5_K562,LX,GEMIN5,K562
DDX3X_HepG2,LY,DDX3X,HepG2
HNRNPC_HepG2,LZ,HNRNPC,HepG2
DDX6_HepG2,MB,DDX6,HepG2
PTBP1_HepG2,MD,PTBP1,HepG2
CSTF2T_K562,ME,CSTF2T,K562
HLTF_HepG2,MF,HLTF,HepG2
PRPF4_HepG2,MH,PRPF4,HepG2
PABPC4_K562,MI,PABPC4,K562
EIF3H_HepG2,MJ,EIF3H,HepG2
AQR_HepG2,MK,AQR,HepG2
EFTUD2_K562,ML,EFTUD2,K562
DGCR8_adrenal_gland,MM,DGCR8,adrenal
AARS_K562,MO,AARS,K562
TBRG4_HepG2,MP,TBRG4,HepG2
HNRNPL_HepG2,MQ,HNRNPL,HepG2
HNRNPM_HepG2,MR,HNRNPM,HepG2
FAM120A_HepG2,MS,FAM120A,HepG2
RBM15_K562,MU,RBM15,K562
SF3B4_K562,MV,SF3B4,K562
DDX24_K562,MW,DDX24,K562
SF3B1_K562,MX,SF3B1,K562
PRPF8_K562,MY,PRPF8,K562
U2AF2_HepG2,MZ,U2AF2,HepG2
CSTF2T_HepG2,OB,CSTF2T,HepG2
EFTUD2_HepG2,OD,EFTUD2,HepG2
SUGP2_HepG2,OE,SUGP2,HepG2
BUD13_HepG2,OF,BUD13,HepG2
YBX3_K562,OH,YBX3,K562
ZNF622_K562,OI,ZNF622,K562
KHSRP_K562,OJ,KHSRP,K562
BUD13_K562,OK,BUD13,K562
UTP3_K562,OL,UTP3,K562
AQR_K562,OM,AQR,K562
PRPF8_HepG2,OO,PRPF8,HepG2
UCHL5_K562,OP,UCHL5,K562
PPIG_HepG2,OQ,PPIG,HepG2
GRWD1_HepG2,OR,GRWD1,HepG2
BCLAF1_HepG2,OS,BCLAF1,HepG2