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feat: port FraXtex vectorization stage
AyoubAdd stage 2 ported from the FraXtex QGIS plugin: threshold, remove small objects, skeletonize, polygonize, buffer/dissolve, pygeoops centerline, simplify, write GeoPackage. Distances are given in pixels and scaled by the raster resolution, so they behave the same on a georeferenced raster and on a plain PNG. Expects the inference convention that high values mean fracture. One fix over the plugin: an adaptive threshold is a per-pixel array, so the plugin's log line prints a whole 2D array. Summarise it instead. Claude-Session: https://claude.ai/code/session_01PMtrdVLnNcKxDGfurm5Wkpfa7174b