- Move old harness to archive/harness-v1/
- Update README.md with v2 architecture, new DOI (10.5281/zenodo.18792459)
- Update CITATION.cff for v0.04
- Update REPRODUCIBILITY.md for 53-test v2 suite
- Update requirements.txt (gradio + matplotlib only)
- Update .gitignore to exclude binaries and v2 working directory
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
