dylanplummer commited on
Commit
28cee65
·
1 Parent(s): 095bd07

violin fix

Browse files
Files changed (1) hide show
  1. app.py +2 -2
app.py CHANGED
@@ -378,7 +378,7 @@ def perturb(gene, locus1, locus2, use_max_gene):
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  image_from_plot = image_from_plot[:, :, [1, 2, 3, 0]]
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  fig, ax = plt.subplots(figsize=(6, 4))
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- sc.pl.violin(rna, gene, groupby='celltype', layer='counts', show=False, ax=ax, rotation=90)
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  ax.set_title(f'Normal {max_gene if use_max_gene else gene} expression')
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  fig.tight_layout()
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  fig.canvas.draw()
@@ -422,7 +422,7 @@ with gr.Blocks(theme='WeixuanYuan/Soft_dark') as demo:
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  with gr.Row():
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  out_heatmaps = []
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  for celltype in cooler_celltypes:
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- out_heatmaps.append(gr.Image(label=celltype, elem_id=f'out-heatmap-{celltype}', scale=1))
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  with gr.Row():
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  heatmap_button = gr.Button(value="Generate Heatmaps", elem_id='heatmap-button', scale=1)
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  run_button = gr.Button(value="Run", elem_id='run-button', scale=1)
 
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  image_from_plot = image_from_plot[:, :, [1, 2, 3, 0]]
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  fig, ax = plt.subplots(figsize=(6, 4))
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+ sc.pl.violin(rna, max_gene if use_max_gene else gene, groupby='celltype', layer='counts', show=False, ax=ax, rotation=90)
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  ax.set_title(f'Normal {max_gene if use_max_gene else gene} expression')
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  fig.tight_layout()
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  fig.canvas.draw()
 
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  with gr.Row():
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  out_heatmaps = []
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  for celltype in cooler_celltypes:
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+ out_heatmaps.append(gr.Image(label=celltype, elem_id=f'out-heatmap-{celltype}', scale=1, interactive=False))
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  with gr.Row():
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  heatmap_button = gr.Button(value="Generate Heatmaps", elem_id='heatmap-button', scale=1)
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  run_button = gr.Button(value="Run", elem_id='run-button', scale=1)