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from io import BytesIO
from copy import deepcopy
import re
import sys
from types import SimpleNamespace
from urllib.parse import parse_qs, urlparse
from uuid import uuid4
import fitz
import pytest
from fastapi import HTTPException
from fastapi.testclient import TestClient
from PIL import Image
from simpliscribe.main import app
from simpliscribe.inference import fallback_extract
from simpliscribe.inference import build_medication_record
from simpliscribe.inference import call_huggingface
from simpliscribe.inference import refine_model_medications
from simpliscribe.ocr import OCRLine, OCRResult
from simpliscribe import ocr
from simpliscribe.security import _oidc_configuration, oidc_user_from_claims
from simpliscribe.storage import append_audit_event, append_history, load_history, save_history, update_analysis_record
from simpliscribe.storage import get_analysis_record
from simpliscribe.config import Settings, settings
client = TestClient(app)
def test_huggingface_client_uses_configured_timeout(monkeypatch):
captured: dict[str, object] = {}
class FakeClient:
def __init__(self, **kwargs):
captured.update(kwargs)
def chat_completion(self, **kwargs):
return SimpleNamespace(
choices=[SimpleNamespace(message=SimpleNamespace(content='{"medications": []}'))]
)
monkeypatch.setattr(
"simpliscribe.inference.settings",
SimpleNamespace(hf_token="test-token", hf_model="test-model", request_timeout_seconds=12.5),
)
monkeypatch.setattr("simpliscribe.inference.InferenceClient", FakeClient)
monkeypatch.setattr("simpliscribe.inference.refine_model_medications", lambda _, medications: medications)
result = call_huggingface("Paracetamol 650 mg")
assert result["medications"] == []
assert captured["token"] == "test-token"
assert captured["timeout"] == 12.5
def test_ocr_disables_mkldnn_for_cpu_compatibility(monkeypatch):
captured: dict[str, object] = {}
class FakePaddleOCR:
def __init__(self, **kwargs):
captured.update(kwargs)
monkeypatch.setattr(ocr, "_ocr_reader", None)
monkeypatch.setitem(sys.modules, "paddleocr", SimpleNamespace(PaddleOCR=FakePaddleOCR))
ocr.get_ocr_reader()
assert captured["device"] == "cpu"
assert captured["enable_mkldnn"] is False
def test_dashboard_route():
response = client.get("/")
assert response.status_code == 200
assert 'href="/static/favicon.svg"' in response.text
assert client.get("/static/favicon.svg").status_code == 200
def test_history_api_route():
response = client.get("/api/history")
assert response.status_code == 200
assert "analyses" in response.json()
def test_history_page_exposes_review_triage():
record = {
"id": "history-triage-record",
"created_at": "2026-07-31T00:00:00+00:00",
"filename": "triage.pdf",
"review_status": "needs_review",
"medications": [],
}
try:
append_history(record)
response = client.get("/history")
assert response.status_code == 200
assert 'id="history-search"' in response.text
assert 'id="review-filter"' in response.text
assert 'data-review-status="needs_review"' in response.text
finally:
save_history([])
def test_audit_api_returns_only_local_owner_events():
local_event_id = str(uuid4())
other_event_id = str(uuid4())
append_audit_event(local_event_id, "local", "analysis_reviewed", "test-analysis", status="confirmed")
append_audit_event(other_event_id, "other-owner", "analysis_reviewed", "test-analysis", status="confirmed")
response = client.get("/api/audit")
assert response.status_code == 200
event = next(item for item in response.json()["events"] if item["id"] == local_event_id)
assert event == {
"id": local_event_id,
"analysis_id": "test-analysis",
"event_type": "analysis_reviewed",
"created_at": event["created_at"],
"metadata": {"status": "confirmed"},
}
assert all(item["id"] != other_event_id for item in response.json()["events"])
def test_health_route_exposes_review_boundary():
response = client.get("/api/health")
assert response.status_code == 200
assert response.json()["clinical_use"] == "human_review_required"
def test_authentication_redirects_and_creates_secure_session():
original_required = settings.auth_required
original_email = settings.admin_email
original_password = settings.admin_password
original_role = settings.admin_role
object.__setattr__(settings, "auth_required", True)
object.__setattr__(settings, "admin_email", "reviewer@example.test")
object.__setattr__(settings, "admin_password", "correct horse battery staple")
auth_client = TestClient(app)
try:
response = auth_client.get("/", follow_redirects=False)
assert response.status_code == 303
assert response.headers["location"] == "/login"
assert response.headers["cache-control"] == "no-store"
assert response.headers["x-frame-options"] == "DENY"
login_page = auth_client.get("/login")
csrf = re.search(r'name="csrf" value="([^"]+)"', login_page.text).group(1)
login_response = auth_client.post(
"/login",
data={"email": "reviewer@example.test", "password": "correct horse battery staple", "csrf": csrf},
follow_redirects=False,
)
assert login_response.status_code == 303
assert login_response.headers["location"] == "/"
dashboard = auth_client.get("/")
assert dashboard.status_code == 200
logout_csrf = re.search(r'action="/logout"[\s\S]*?name="csrf" value="([^"]+)"', dashboard.text).group(1)
logout_response = auth_client.post("/logout", data={"csrf": logout_csrf}, follow_redirects=False)
assert logout_response.status_code == 303
assert logout_response.headers["location"] == "/login"
assert auth_client.get("/", follow_redirects=False).status_code == 303
finally:
object.__setattr__(settings, "auth_required", original_required)
object.__setattr__(settings, "admin_email", original_email)
object.__setattr__(settings, "admin_password", original_password)
object.__setattr__(settings, "admin_role", original_role)
def test_production_configuration_fails_closed_without_required_secrets():
with pytest.raises(RuntimeError, match="Unsafe runtime configuration"):
Settings(
app_env="production",
database_url="sqlite:///data/simpliscribe.db",
session_secret="development-only-change-me",
admin_password="",
).validate_runtime()
def test_production_configuration_requires_an_admin_email():
with pytest.raises(RuntimeError, match="ADMIN_EMAIL is required"):
Settings(
app_env="production",
database_url="postgresql://example.test/simpliscribe",
session_secret="a" * 32,
admin_email=" ",
admin_password="correct horse battery staple",
).validate_runtime()
def test_production_configuration_requires_postgresql():
with pytest.raises(RuntimeError, match="DATABASE_URL must use PostgreSQL"):
Settings(
app_env="production",
database_url="mysql://example.test/simpliscribe",
session_secret="a" * 32,
admin_password="correct horse battery staple",
).validate_runtime()
def test_runtime_configuration_rejects_an_invalid_session_lifetime():
with pytest.raises(RuntimeError, match="SESSION_MAX_AGE_SECONDS must be at least 1"):
Settings(session_max_age_seconds=0).validate_runtime()
def test_runtime_configuration_rejects_an_invalid_bootstrap_role():
with pytest.raises(RuntimeError, match="ADMIN_ROLE must be admin, reviewer, or auditor"):
Settings(admin_role="operator").validate_runtime()
def test_production_configuration_accepts_complete_oidc_without_bootstrap_password():
Settings(
app_env="production",
database_url="postgresql://example.test/simpliscribe",
session_secret="a" * 32,
admin_password="",
oidc_issuer="https://identity.example.test",
oidc_client_id="simpliscribe",
oidc_client_secret="secret",
oidc_redirect_uri="https://app.example.test/auth/callback",
).validate_runtime()
def test_runtime_configuration_rejects_partial_oidc_setup():
with pytest.raises(RuntimeError, match="OIDC_ISSUER, OIDC_CLIENT_ID, OIDC_CLIENT_SECRET, and OIDC_REDIRECT_URI"):
Settings(oidc_issuer="https://identity.example.test").validate_runtime()
def test_oidc_claims_map_to_least_privilege_roles(monkeypatch):
oidc_settings = Settings(
oidc_issuer="https://identity.example.test",
oidc_client_id="simpliscribe",
oidc_client_secret="secret",
oidc_redirect_uri="https://app.example.test/auth/callback",
oidc_admin_subjects="admin-subject",
oidc_reviewer_subjects="reviewer-subject",
)
monkeypatch.setattr("simpliscribe.security.settings", oidc_settings)
assert oidc_user_from_claims({"sub": "admin-subject", "email": "admin@example.test"})["role"] == "admin"
assert oidc_user_from_claims({"sub": "reviewer-subject"})["role"] == "reviewer"
assert oidc_user_from_claims({"sub": "unmapped-subject"})["role"] == "auditor"
def test_oidc_login_uses_the_provider_redirect(monkeypatch):
original = (settings.oidc_issuer, settings.oidc_client_id, settings.oidc_client_secret, settings.oidc_redirect_uri)
object.__setattr__(settings, "oidc_issuer", "https://identity.example.test")
object.__setattr__(settings, "oidc_client_id", "simpliscribe")
object.__setattr__(settings, "oidc_client_secret", "secret")
object.__setattr__(settings, "oidc_redirect_uri", "https://app.example.test/auth/callback")
async def fake_authorization_url(_):
return "https://identity.example.test/authorize?state=test"
monkeypatch.setattr("simpliscribe.main.oidc_authorization_url", fake_authorization_url)
oidc_client = TestClient(app)
try:
login_page = oidc_client.get("/login")
assert "Continue with organization sign-in" in login_page.text
response = oidc_client.get("/login/oidc", follow_redirects=False)
assert response.status_code == 303
assert response.headers["location"] == "https://identity.example.test/authorize?state=test"
finally:
object.__setattr__(settings, "oidc_issuer", original[0])
object.__setattr__(settings, "oidc_client_id", original[1])
object.__setattr__(settings, "oidc_client_secret", original[2])
object.__setattr__(settings, "oidc_redirect_uri", original[3])
def test_oidc_callback_exchanges_pkce_code_and_creates_a_reviewer_session(monkeypatch):
original = (
settings.oidc_issuer,
settings.oidc_client_id,
settings.oidc_client_secret,
settings.oidc_redirect_uri,
settings.oidc_reviewer_subjects,
)
object.__setattr__(settings, "oidc_issuer", "https://identity.example.test")
object.__setattr__(settings, "oidc_client_id", "simpliscribe")
object.__setattr__(settings, "oidc_client_secret", "secret")
object.__setattr__(settings, "oidc_redirect_uri", "https://app.example.test/auth/callback")
object.__setattr__(settings, "oidc_reviewer_subjects", "reviewer-subject")
class FakeResponse:
def __init__(self, payload):
self.payload = payload
def raise_for_status(self):
return None
def json(self):
return self.payload
class FakeClient:
post_data = None
def __init__(self, **_):
pass
async def __aenter__(self):
return self
async def __aexit__(self, *_):
return None
async def get(self, url, headers=None):
if url.endswith("/.well-known/openid-configuration"):
return FakeResponse({
"issuer": "https://identity.example.test",
"authorization_endpoint": "https://identity.example.test/authorize",
"token_endpoint": "https://identity.example.test/token",
"userinfo_endpoint": "https://identity.example.test/userinfo",
})
assert url == "https://identity.example.test/userinfo"
assert headers == {"Authorization": "Bearer access-token"}
return FakeResponse({"sub": "reviewer-subject", "email": "reviewer@example.test"})
async def post(self, url, data):
assert url == "https://identity.example.test/token"
assert data["code"] == "provider-code"
assert data["code_verifier"]
FakeClient.post_data = data
return FakeResponse({"access_token": "access-token"})
monkeypatch.setattr("simpliscribe.security.httpx.AsyncClient", FakeClient)
oidc_client = TestClient(app)
try:
start = oidc_client.get("/login/oidc", follow_redirects=False)
state = parse_qs(urlparse(start.headers["location"]).query)["state"][0]
callback = oidc_client.get(f"/auth/callback?state={state}&code=provider-code", follow_redirects=False)
assert callback.status_code == 303
assert FakeClient.post_data["client_id"] == "simpliscribe"
assert oidc_client.get("/").status_code == 200
finally:
object.__setattr__(settings, "oidc_issuer", original[0])
object.__setattr__(settings, "oidc_client_id", original[1])
object.__setattr__(settings, "oidc_client_secret", original[2])
object.__setattr__(settings, "oidc_redirect_uri", original[3])
object.__setattr__(settings, "oidc_reviewer_subjects", original[4])
def test_oidc_discovery_rejects_insecure_endpoints(monkeypatch):
class FakeResponse:
def raise_for_status(self):
return None
def json(self):
return {
"issuer": "https://identity.example.test",
"authorization_endpoint": "https://identity.example.test/authorize",
"token_endpoint": "http://identity.example.test/token",
"userinfo_endpoint": "https://identity.example.test/userinfo",
}
class FakeClient:
def __init__(self, **_):
pass
async def __aenter__(self):
return self
async def __aexit__(self, *_):
return None
async def get(self, _):
return FakeResponse()
monkeypatch.setattr("simpliscribe.security.httpx.AsyncClient", FakeClient)
monkeypatch.setattr(
"simpliscribe.security.settings",
SimpleNamespace(oidc_enabled=True, oidc_issuer="https://identity.example.test"),
)
with pytest.raises(HTTPException) as exc_info:
asyncio.run(_oidc_configuration())
assert exc_info.value.status_code == 503
def test_auditor_cannot_create_or_change_analyses():
original_required = settings.auth_required
original_email = settings.admin_email
original_password = settings.admin_password
original_role = settings.admin_role
object.__setattr__(settings, "auth_required", True)
object.__setattr__(settings, "admin_email", "auditor@example.test")
object.__setattr__(settings, "admin_password", "correct horse battery staple")
object.__setattr__(settings, "admin_role", "auditor")
auth_client = TestClient(app)
try:
login_page = auth_client.get("/login")
csrf = re.search(r'name="csrf" value="([^"]+)"', login_page.text).group(1)
assert auth_client.post(
"/login",
data={"email": "auditor@example.test", "password": "correct horse battery staple", "csrf": csrf},
).status_code == 200
assert auth_client.get("/api/audit").status_code == 200
append_history(
{"id": "auditor-view-record", "created_at": "2026-07-29T00:00:00+00:00", "medications": []},
owner_id="auditor@example.test",
)
details = auth_client.get("/details/auditor-view-record")
assert details.status_code == 200
assert "Auditor access is read-only" in details.text
assert 'data-review-status="confirmed"' not in details.text
image_buffer = BytesIO()
Image.new("RGB", (1, 1), "white").save(image_buffer, format="PNG")
response = auth_client.post(
"/api/analyze",
data={"consent": "true"},
files={"file": ("rx.png", image_buffer.getvalue(), "image/png")},
)
assert response.status_code == 403
assert response.json()["detail"] == "Reviewer role required."
assert auth_client.patch("/api/analyses/unknown/review", json={"status": "confirmed"}).status_code == 403
finally:
object.__setattr__(settings, "auth_required", original_required)
object.__setattr__(settings, "admin_email", original_email)
object.__setattr__(settings, "admin_password", original_password)
object.__setattr__(settings, "admin_role", original_role)
save_history([], "auditor@example.test")
def test_analyze_preserves_parsed_contract_and_pipeline_metadata(monkeypatch):
original_history = load_history()
threaded_functions = []
async def run_inline(func, *args, **kwargs):
threaded_functions.append(func)
return func(*args, **kwargs)
def fake_ocr(_):
return OCRResult(
"Paracetamol 650 mg tab od 5 days",
0.94,
(OCRLine("Paracetamol 650 mg tab od 5 days", 0.94),),
(),
)
def fake_structure(_):
return {
"patient_name": "A Patient",
"doctor_name": "Dr. B",
"date": "2026-07-10",
"medications": [{"name": "Paracetamol", "requires_review": True}],
"pipeline": {"used_provider": "fallback", "warnings": []},
}
monkeypatch.setattr("simpliscribe.web.asyncio.to_thread", run_inline)
monkeypatch.setattr(
"simpliscribe.web.extract_ocr_result",
fake_ocr,
)
monkeypatch.setattr("simpliscribe.web.structure_medications", fake_structure)
image_buffer = BytesIO()
Image.new("RGB", (1, 1), "white").save(image_buffer, format="PNG")
image = image_buffer.getvalue()
try:
response = client.post("/api/analyze", data={"consent": "true"}, files={"file": ("rx.png", image, "image/png")})
assert response.status_code == 200
payload = response.json()
assert payload["medications"] == [{"name": "Paracetamol", "requires_review": True}]
assert payload["patient_name"] == "A Patient"
assert payload["pipeline"]["ocr_confidence"] == 0.94
assert payload["review_status"] == "needs_review"
assert response.headers["cache-control"] == "no-store"
assert threaded_functions == [fake_ocr, fake_structure]
finally:
save_history(original_history)
def test_analyze_rejects_spoofed_image_and_removes_upload():
before = {path.name for path in settings.uploads_dir.iterdir()}
response = client.post("/api/analyze", data={"consent": "true"}, files={"file": ("fake.png", b"not an image", "image/png")})
assert response.status_code == 400
assert "not a valid supported image" in response.json()["detail"]
assert {path.name for path in settings.uploads_dir.iterdir()} == before
def test_analyze_requires_explicit_consent():
response = client.post("/api/analyze", files={"file": ("rx.png", b"not an image", "image/png")})
assert response.status_code == 400
assert response.json()["detail"] == "Explicit processing consent is required."
def test_storage_isolates_analysis_owners():
owner_a = "test-owner-a"
owner_b = "test-owner-b"
record = {"id": "owner-isolation-record", "created_at": "2026-07-11T00:00:00+00:00", "medications": []}
try:
append_history(record, owner_id=owner_a)
assert get_analysis_record(record["id"], owner_a) == record
assert get_analysis_record(record["id"], owner_b) is None
finally:
save_history([], owner_a)
def test_storage_rejects_stale_analysis_update():
record = {"id": "stale-update-record", "created_at": "2026-07-11T00:00:00+00:00", "medications": []}
try:
append_history(record)
first_copy = get_analysis_record(record["id"])
stale_copy = get_analysis_record(record["id"])
updated = deepcopy(first_copy)
updated["review_status"] = "confirmed"
assert update_analysis_record(record["id"], "local", updated, expected_record=first_copy)
stale_copy["review_status"] = "rejected"
assert not update_analysis_record(record["id"], "local", stale_copy, expected_record=stale_copy)
finally:
save_history([])
def test_review_endpoint_updates_owned_analysis():
original_history = load_history()
record = {
"id": "review-test-id",
"created_at": "2026-07-11T00:00:00+00:00",
"medications": [{"name": "Paracetmol", "type": "Tablet", "dosage": "650 mg", "frequency": "once daily", "duration": "5 days"}],
}
try:
append_history(record)
response = client.patch(
"/api/analyses/review-test-id/review",
json={"status": "corrected", "medications": [{"name": "Paracetamol"}]},
)
assert response.status_code == 200
updated = get_analysis_record("review-test-id")
assert updated["review_status"] == "corrected"
assert updated["medications"][0]["name"] == "Paracetamol"
assert updated["reviewed_by"] == "local"
assert updated["review_versions"] == [
{
"version": 1,
"recorded_at": updated["review_versions"][0]["recorded_at"],
"status": "needs_review",
"reviewed_at": None,
"reviewed_by": None,
"medications": [{"name": "Paracetmol", "type": "Tablet", "dosage": "650 mg", "frequency": "once daily", "duration": "5 days"}],
}
]
response = client.patch("/api/analyses/review-test-id/review", json={"status": "confirmed"})
assert response.status_code == 200
updated = get_analysis_record("review-test-id")
assert updated["review_versions"][1]["status"] == "corrected"
assert updated["review_versions"][1]["medications"][0]["name"] == "Paracetamol"
finally:
save_history(original_history)
def test_analyze_removes_upload_when_ocr_is_unusable(monkeypatch):
before = {path.name for path in settings.uploads_dir.iterdir()}
monkeypatch.setattr("simpliscribe.web.extract_ocr_result", lambda _: (_ for _ in ()).throw(ValueError("unusable")))
image_buffer = BytesIO()
Image.new("RGB", (2, 2), "white").save(image_buffer, format="PNG")
response = client.post("/api/analyze", data={"consent": "true"}, files={"file": ("rx.png", image_buffer.getvalue(), "image/png")})
assert response.status_code == 422
assert response.json()["error_code"] == "UNUSABLE_PRESCRIPTION"
assert {path.name for path in settings.uploads_dir.iterdir()} == before
def test_fallback_extract_handles_multiline_prescriptions():
raw_text = "Paracetamol 650 tab od 5 days\nAmoxycillin 500 cap bd 5 days"
medications = fallback_extract(raw_text)["medications"]
assert len(medications) >= 2
assert medications[0]["name"]
assert medications[0]["frequency"] == "once daily"
def test_build_medication_record_normalizes_model_output_fields():
record = build_medication_record(
name="Paracetamol",
category="General",
medication_type="Tabular",
dosage="650 mg daily for 5 days",
frequency="od",
duration="for 5 day",
insight="Follow the prescription exactly as written.",
entry=None,
)
assert record["type"] == "Tablet"
assert record["dosage"] == "650 mg"
assert record["frequency"] == "once daily"
assert record["duration"] == "5 days"
def test_refine_model_medications_uses_ocr_heuristics_for_shorthand_fields():
raw_text = "Amoxycillin 500 cap bd 5 days\nCetirizine 10 tab hs 3 days"
model_medications = [
{
"name": "Amoxycillin",
"category": "General",
"type": "Tablet",
"dosage": "500 mg",
"frequency": "twice daily",
"duration": "5 days",
"insight": "Follow the prescription exactly as written.",
},
{
"name": "Cetirizine",
"category": "General",
"type": "Tablet",
"dosage": "10 mg",
"frequency": "three times daily",
"duration": "3 days",
"insight": "Follow the prescription exactly as written.",
},
]
refined = refine_model_medications(raw_text, model_medications)
assert refined[0]["type"] == "Capsule"
assert refined[1]["frequency"] == "at bedtime"
def test_report_download_route_returns_pdf():
original_history = load_history()
record = {
"id": "test-report-id",
"filename": "sample-prescription.pdf",
"created_at": "2026-03-11T12:00:00+00:00",
"raw_text": "Paracetamol 650 tab od 5 days",
"medications": [
{
"name": "Paracetamol",
"category": "General",
"type": "Tablet",
"dosage": "650 mg",
"frequency": "once daily",
"duration": "5 days",
"insight": "Use as directed.",
"source": "OCR only",
"source_datasets": [],
"composition": "Paracetamol",
"manufacturer": "",
"pack_size": "",
"therapeutic_class": "",
"chemical_class": "",
"action_class": "",
"substitutes": [],
"uses": [],
"side_effects": [],
}
],
}
try:
append_history(record)
response = client.get("/api/report/test-report-id")
assert response.status_code == 200
assert response.headers["content-type"] == "application/pdf"
assert response.content.startswith(b"%PDF")
finally:
save_history(original_history)
def test_report_download_pdf_contains_expected_content():
original_history = load_history()
record = {
"id": "test-report-content-id",
"filename": "sample prescription.pdf",
"created_at": "2026-03-11T12:00:00+00:00",
"patient_name": "Ananya Sharma",
"doctor_name": "Dr. Meera Rao",
"date": "2026-03-11",
"review_status": "needs_review",
"review_versions": [{"version": 1}],
"pipeline": {"ocr_confidence": 0.87},
"raw_text": "Paracetamol 650 tab od 5 days",
"medications": [
{
"name": "Paracetamol",
"category": "Analgesic",
"type": "Tablet",
"dosage": "650 mg",
"frequency": "once daily",
"duration": "5 days",
"insight": "Use as directed.",
"source": "OCR + dataset match",
"source_datasets": ["India Medicines Dataset"],
"composition": "Paracetamol",
"manufacturer": "ABC Pharma",
"pack_size": "15 tablets",
"therapeutic_class": "Pain relief",
"chemical_class": "Anilide",
"action_class": "Analgesic",
"substitutes": ["Dolo 650"],
"uses": ["Fever"],
"side_effects": ["Nausea"],
"requires_review": True,
"review_reasons": ["Medicine name must be confirmed."],
}
],
}
try:
append_history(record)
response = client.get("/api/report/test-report-content-id")
assert response.status_code == 200
assert 'filename="sample_prescription_report.pdf"' in response.headers["content-disposition"]
document = fitz.open(stream=response.content, filetype="pdf")
extracted_text = "\n".join(page.get_text() for page in document)
assert "Prescription Analysis Report" in extracted_text
assert "Ananya Sharma" in extracted_text
assert "Dr. Meera Rao" in extracted_text
assert "87%" in extracted_text
assert "Paracetamol" in extracted_text
assert "ABC Pharma" in extracted_text
assert "Use as directed." in extracted_text
assert "Paracetamol 650 tab od 5 days" in extracted_text
assert "Needs review" in extracted_text
assert "PRIOR REVIEW STATES" in extracted_text.upper()
assert "1" in extracted_text
assert "Medicine name must be confirmed." in extracted_text
finally:
save_history(original_history)
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