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README.md
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app_file: app.py
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license: apache-2.0
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short_description:
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models:
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- gbrixi/minerva-mlm
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- gbrixi/minerva-mlm-8k
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# Minerva
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coevolutionary mining: RNA base pairing, DNA repeats and protein contacts in one overlay.
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Input can be raw DNA or FASTA (genes are called with Pyrodigal and translated), a protein, an RNA,
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a GenBank file, or Minerva's mixed protein + DNA format. The model reads 4,096 tokens (8,192 with
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app_file: app.py
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license: apache-2.0
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short_description: Coevolutionary discovery with a genome language model
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models:
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- gbrixi/minerva-mlm
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- gbrixi/minerva-mlm-8k
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# Minerva
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Interaction maps from [Minerva-MLM](https://huggingface.co/gbrixi/minerva-mlm), a genome language
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model for coevolutionary discovery: RNA base pairing, DNA repeats and protein contacts in one overlay.
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Input can be raw DNA or FASTA (genes are called with Pyrodigal and translated), a protein, an RNA,
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a GenBank file, or Minerva's mixed protein + DNA format. The model reads 4,096 tokens (8,192 with
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app.py
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TAGLINE = """
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### Coevolutionary discovery with a genome language model
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Input a sequence and see predicted interactions.
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[GitHub](https://github.com/garykbrixi/minerva) 路 [Model card](https://huggingface.co/gbrixi/minerva-mlm) 路
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[Paper](https://doi.org/10.64898/2026.09.22.753630)
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"""
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TAGLINE = """
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### Coevolutionary discovery with a genome language model
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[GitHub](https://github.com/garykbrixi/minerva) 路 [Model card](https://huggingface.co/gbrixi/minerva-mlm) 路
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[Paper](https://doi.org/10.64898/2026.09.22.753630)
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"""
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