variantllm / pyproject.toml
hardiksood21
ci: add transformers to pyproject dependencies and install requirements.txt in GitHub Actions
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[build-system]
requires = ["setuptools>=61.0"]
build-backend = "setuptools.build_meta"
[project]
name = "variantllm"
version = "0.1.0"
description = "Genomic Foundation Model & Clinical Variant Effect Prediction Engine"
authors = [{ name = "Hardik Sood", email = "hardik.sood.phe24@itbhu.ac.in" }]
readme = "README.md"
requires-python = ">=3.10"
dependencies = [
"torch>=2.0.0",
"transformers>=4.30.0",
"gradio>=4.0.0",
"streamlit>=1.30.0",
"plotly>=5.15.0",
"pandas>=2.0.0",
"numpy>=1.24.0",
"scikit-learn>=1.3.0",
"fastapi>=0.100.0",
"uvicorn>=0.22.0",
"httpx>=0.24.0"
]
[tool.pytest.ini_options]
testpaths = ["tests"]
python_files = ["test_*.py"]