HoLa-BRep / eval /eval_condition.py
YuXingyao's picture
fresh start
e289681
Raw History Blame Contribute Delete
22 kB
import time, os, random, traceback, sys
from pathlib import Path
import matplotlib.pyplot as plt
import torch
import numpy as np
from OCC.Core.BRepAdaptor import BRepAdaptor_Curve
from tqdm import tqdm
import trimesh
import argparse
# import pandas as pd
from chamferdist import ChamferDistance
from OCC.Core.STEPControl import STEPControl_Reader
from OCC.Core.TopExp import TopExp_Explorer
from OCC.Core.TopAbs import TopAbs_VERTEX, TopAbs_EDGE, TopAbs_FACE
from OCC.Core.BRep import BRep_Tool
from OCC.Core.gp import gp_Pnt
from OCC.Core.IFSelect import IFSelect_RetDone
from OCC.Extend.DataExchange import read_step_file, write_step_file, write_stl_file
from OCC.Core.BRepCheck import BRepCheck_Analyzer
import ray
import shutil
from OCC.Core.TopoDS import TopoDS_Solid, TopoDS_Shell
from OCC.Core.TopAbs import TopAbs_COMPOUND, TopAbs_SHELL, TopAbs_SOLID
from diffusion.utils import get_primitives, get_triangulations, get_points_along_edge, get_curve_length
from eval.check_valid import check_step_valid_soild
def is_vertex_close(p1, p2, tol=1e-3):
return np.linalg.norm(np.array(p1) - np.array(p2)) < tol
def compute_statistics(eval_root, v_only_valid, listfile):
all_folders = [folder for folder in os.listdir(eval_root) if os.path.isdir(os.path.join(eval_root, folder))]
if listfile != '':
valid_names = [item.strip() for item in open(listfile, 'r').readlines()]
all_folders = list(set(all_folders) & set(valid_names))
all_folders.sort()
exception_folders = []
results = {
"prefix": []
}
for folder_name in tqdm(all_folders):
if not os.path.exists(os.path.join(eval_root, folder_name, 'eval.npz')):
exception_folders.append(folder_name)
continue
item = np.load(os.path.join(eval_root, folder_name, 'eval.npz'), allow_pickle=True)['results'].item()
if item['num_recon_face'] == 1:
exception_folders.append(folder_name)
if v_only_valid:
continue
if v_only_valid and not os.path.exists(os.path.join(eval_root, folder_name, 'success.txt')):
continue
results["prefix"].append(folder_name)
for key in item:
if key not in results:
results[key] = []
results[key].append(item[key])
if len(exception_folders) != 0:
print(f"Found exception folders: {exception_folders}")
for key in results:
results[key] = np.array(results[key])
results_str = ""
results_str += "Number\n"
results_str += f"Vertices: {np.mean(results['num_recon_vertex'])}/{np.mean(results['num_gt_vertex'])}\n"
results_str += f"Edge: {np.mean(results['num_recon_edge'])}/{np.mean(results['num_gt_edge'])}\n"
results_str += f"Face: {np.mean(results['num_recon_face'])}/{np.mean(results['num_gt_face'])}\n"
results_str += "Chamfer\n"
results_str += f"Vertices: {np.mean(results['vertex_cd'])}\n"
results_str += f"Edge: {np.mean(results['edge_cd'])}\n"
results_str += f"Face: {np.mean(results['face_cd'])}\n"
results_str += "Detection\n"
results_str += f"Vertices: {np.mean(results['vertex_fscore'])}\n"
results_str += f"Edge: {np.mean(results['edge_fscore'])}\n"
results_str += f"Face: {np.mean(results['face_fscore'])}\n"
results_str += "Topology\n"
results_str += f"FE: {np.mean(results['fe_fscore'])}\n"
results_str += f"EV: {np.mean(results['ev_fscore'])}\n"
results_str += "Accuracy\n"
results_str += f"Vertices: {np.mean(results['vertex_acc_cd'])}\n"
results_str += f"Edge: {np.mean(results['edge_acc_cd'])}\n"
results_str += f"Face: {np.mean(results['face_acc_cd'])}\n"
results_str += f"FE: {np.mean(results['fe_pre'])}\n"
results_str += f"EV: {np.mean(results['ev_pre'])}\n"
results_str += "Completeness\n"
results_str += f"Vertices: {np.mean(results['vertex_com_cd'])}\n"
results_str += f"Edge: {np.mean(results['edge_com_cd'])}\n"
results_str += f"Face: {np.mean(results['face_com_cd'])}\n"
results_str += f"FE: {np.mean(results['fe_rec'])}\n"
results_str += f"EV: {np.mean(results['ev_rec'])}\n"
print(results_str)
print("{:.4f} {:.4f} {:.4f} {:.2f} {:.2f} {:.2f} {:.2f} {:.2f}".format(
np.mean(results['vertex_cd']), np.mean(results['edge_cd']), np.mean(results['face_cd']),
np.mean(results['vertex_fscore']), np.mean(results['edge_fscore']), np.mean(results['face_fscore']),
np.mean(results['fe_fscore']), np.mean(results['ev_fscore']),
))
print(
"{:.0f}/{:.0f} {:.0f}/{:.0f} {:.0f}/{:.0f} {:.4f} {:.4f} {:.4f} {:.4f} {:.4f} {:.4f} {:.2f} {:.2f} {:.2f} {:.2f} {:.2f} {:.2f} {:.2f} {:.2f} {:.2f} {:.2f}".format(
np.mean(results['num_recon_vertex']), np.mean(results['num_gt_vertex']),
np.mean(results['num_recon_edge']), np.mean(results['num_gt_edge']),
np.mean(results['num_recon_face']), np.mean(results['num_gt_face']),
np.mean(results['vertex_acc_cd']), np.mean(results['edge_acc_cd']), np.mean(results['face_acc_cd']),
np.mean(results['vertex_com_cd']), np.mean(results['edge_com_cd']), np.mean(results['face_com_cd']),
np.mean(results['vertex_pre']), np.mean(results['edge_pre']), np.mean(results['face_pre']),
np.mean(results['fe_pre']), np.mean(results['ev_pre']),
np.mean(results['vertex_rec']), np.mean(results['edge_rec']), np.mean(results['face_rec']),
np.mean(results['fe_rec']), np.mean(results['ev_rec'])
))
# print(f"{len(all_folders)-len(exception_folders)}/{len(all_folders)} are valid")
print(f"{results['face_cd'].shape[0]}/{len(all_folders)} are valid")
def draw():
face_chamfer = results['face_cd']
fig, ax = plt.subplots(1, 1, figsize=(6, 6))
ax.hist(face_chamfer, bins=50, range=(0, 0.05), density=True, alpha=0.5, color='b', label='Face')
ax.set_title('Face Chamfer Distance')
ax.set_xlabel('Chamfer Distance')
ax.set_ylabel('Density')
ax.legend()
plt.savefig(str(eval_root) + "_face_chamfer.png", dpi=600)
# plt.show()
draw()
pass
def get_data(v_shape, v_num_per_m=100):
faces, face_points, edges, edge_points, vertices, vertex_points = [], [], [], [], [], []
for face in get_primitives(v_shape, TopAbs_FACE, v_remove_half=True):
try:
v, f = get_triangulations(face, 0.1, 0.1)
if len(f) == 0:
print("Ignore 0 face")
continue
except:
print("Ignore 1 face")
continue
mesh_item = trimesh.Trimesh(vertices=v, faces=f)
area = mesh_item.area
num_samples = min(max(int(v_num_per_m * v_num_per_m * area), 5), 10000)
pc_item, id_face = trimesh.sample.sample_surface(mesh_item, num_samples)
normals = mesh_item.face_normals[id_face]
faces.append(face)
face_points.append(np.concatenate((pc_item, normals), axis=1))
for edge in get_primitives(v_shape, TopAbs_EDGE, v_remove_half=True):
length = get_curve_length(edge)
num_samples = min(max(int(v_num_per_m * length), 5), 10000)
v = get_points_along_edge(edge, num_samples)
edges.append(edge)
edge_points.append(v)
for vertex in get_primitives(v_shape, TopAbs_VERTEX, v_remove_half=True):
vertices.append(vertex)
vertex_points.append(np.asarray([BRep_Tool.Pnt(vertex).Coord()]))
vertex_points = np.stack(vertex_points, axis=0)
return faces, face_points, edges, edge_points, vertices, vertex_points
def get_chamfer(v_recon_points, v_gt_points):
device = torch.device('cuda') if torch.cuda.is_available() else torch.device('cpu')
chamfer_distance = ChamferDistance()
recon_fp = torch.from_numpy(np.concatenate(v_recon_points, axis=0)).float().to(device)[:, :3]
gt_fp = torch.from_numpy(np.concatenate(v_gt_points, axis=0)).float().to(device)[:, :3]
fp_acc_cd = chamfer_distance(recon_fp.unsqueeze(0), gt_fp.unsqueeze(0),
bidirectional=False, point_reduction='mean').cpu().item()
fp_com_cd = chamfer_distance(gt_fp.unsqueeze(0), recon_fp.unsqueeze(0),
bidirectional=False, point_reduction='mean').cpu().item()
fp_cd = fp_acc_cd + fp_com_cd
return fp_acc_cd, fp_com_cd, fp_cd
def get_match_ids(v_recon_points, v_gt_points):
from scipy.optimize import linear_sum_assignment
cost = np.zeros([len(v_recon_points), len(v_gt_points)]) # recon to gt
for i in range(cost.shape[0]):
for j in range(cost.shape[1]):
_, _, cost[i][j] = get_chamfer(
v_recon_points[i][..., :3][None, ..., :3],
v_gt_points[j][..., :3][None, ..., :3]
)
recon_indices, recon_to_gt = linear_sum_assignment(cost)
result_recon2gt = -1 * np.ones(len(v_recon_points), dtype=np.int32)
result_gt2recon = -1 * np.ones(len(v_gt_points), dtype=np.int32)
result_recon2gt[recon_indices] = recon_to_gt
result_gt2recon[recon_to_gt] = recon_indices
return result_recon2gt, result_gt2recon, cost
def get_detection(id_recon_gt, id_gt_recon, cost_matrix, v_threshold=0.1):
true_positive = 0
for i in range(len(id_recon_gt)):
if id_recon_gt[i] != -1 and cost_matrix[i, id_recon_gt[i]] < v_threshold:
true_positive += 1
precision = true_positive / (len(id_recon_gt) + 1e-6)
recall = true_positive / (len(id_gt_recon) + 1e-6)
return 2 * precision * recall / (precision + recall + 1e-6), precision, recall
def get_topology(faces, edges, vertices):
recon_face_edge, recon_edge_vertex = {}, {}
for i_face, face in enumerate(faces):
face_edge = []
for edge in get_primitives(face, TopAbs_EDGE):
face_edge.append(edges.index(edge) if edge in edges else edges.index(edge.Reversed()))
recon_face_edge[i_face] = list(set(face_edge))
for i_edge, edge in enumerate(edges):
edge_vertex = []
for vertex in get_primitives(edge, TopAbs_VERTEX):
edge_vertex.append(vertices.index(vertex) if vertex in vertices else vertices.index(vertex.Reversed()))
recon_edge_vertex[i_edge] = list(set(edge_vertex))
return recon_face_edge, recon_edge_vertex
def get_topo_detection(recon_face_edge, gt_face_edge, id_recon_gt_face, id_recon_gt_edge):
positive = 0
for i_recon_face, edges in recon_face_edge.items():
i_gt_face = id_recon_gt_face[i_recon_face]
if i_gt_face == -1:
continue
for i_edge in edges:
if id_recon_gt_edge[i_edge] in gt_face_edge[i_gt_face]:
positive += 1
precision = positive / (sum([len(edges) for edges in recon_face_edge.values()]) + 1e-6)
recall = positive / (sum([len(edges) for edges in gt_face_edge.values()]) + 1e-6)
return 2 * precision * recall / (precision + recall + 1e-6), precision, recall
def eval_one_with_try(eval_root, gt_root, folder_name, is_point2cad=False, v_num_per_m=100):
try:
eval_one(eval_root, gt_root, folder_name, is_point2cad, v_num_per_m)
except:
pass
def eval_one(eval_root, gt_root, folder_name, is_point2cad=False, v_num_per_m=100):
if os.path.exists(eval_root / folder_name / 'error.txt'):
os.remove(eval_root / folder_name / 'error.txt')
if os.path.exists(eval_root / folder_name / 'eval.npz'):
os.remove(eval_root / folder_name / 'eval.npz')
# At least have fall_back_mesh
step_name = "recon_brep.step"
if is_point2cad:
if not (eval_root / folder_name / "clipped/mesh_transformed.ply").exists():
print(f"Error: {folder_name} does not have mesh_transformed")
return
mesh = trimesh.load(eval_root / folder_name / "clipped/mesh_transformed.ply")
color = np.stack((
[item[1] for item in mesh.metadata['_ply_raw']['face']['data']],
[item[2] for item in mesh.metadata['_ply_raw']['face']['data']],
[item[3] for item in mesh.metadata['_ply_raw']['face']['data']],
), axis=1)
color_map = [list(map(lambda item:int(item),item.strip().split(" "))) for item in open("src/brepnet/eval/point2cad_color.txt").readlines()]
index = np.asarray([color_map.index(item.tolist()) for item in color])
recon_face_points = [None]*(index.max()+1)
for i in range(index.max() + 1):
item_faces = mesh.faces[index == i]
item_mesh = trimesh.Trimesh(vertices=mesh.vertices, faces=item_faces)
num_samples = min(max(int(item_mesh.area * v_num_per_m * v_num_per_m), 5), 10000)
pc_item, id_face = trimesh.sample.sample_surface(item_mesh, num_samples)
normals = item_mesh.face_normals[id_face]
recon_face_points[i] = np.concatenate((pc_item, normals), axis=1)
if not (eval_root / folder_name / "clipped/curve_points.xyzc").exists():
print(f"Error: {folder_name} does not have curve_points")
return
curve_points = np.asarray([list(map(lambda item: float(item),item.strip().split(" "))) for item in open(eval_root / folder_name / "clipped/curve_points.xyzc").readlines()])
num_curves = int(curve_points.max(axis=0)[3]) + 1
recon_edge_points = [None]*num_curves
for i in range(num_curves):
item_points = curve_points[curve_points[:,3] == i][:,:3]
recon_edge_points[i] = item_points
if (eval_root / folder_name / "clipped/remove_duplicates_corners.ply").exists():
pc = trimesh.load(eval_root / folder_name / "clipped/remove_duplicates_corners.ply")
recon_vertex_points = pc.vertices[:,None]
else:
recon_vertex_points = np.asarray((0,0,0), dtype=np.float32)[None,None]
recon_face_edge = {}
recon_edge_vertex = {}
EV_mode = False
for items in open(eval_root / folder_name / 'topo/topo_fix.txt', 'r').readlines():
items = items.strip().split(" ")
if items[0] == "EV":
EV_mode = True
continue
if len(items) == 1:
continue
if not EV_mode:
recon_face_edge[int(items[0])] = list(map(lambda item: int(item), items[1:]))
else:
recon_edge_vertex[int(items[0])] = list(map(lambda item: int(item), items[1:]))
pass
else:
try:
# Face chamfer distance
if (eval_root / folder_name / step_name).exists():
valid, recon_shape = check_step_valid_soild(eval_root / folder_name / step_name, return_shape=True)
else:
print(f"Error: {folder_name} does not have {step_name}")
raise
if recon_shape is None:
print(f"Error: {folder_name} 's {step_name} is not valid")
raise
# Get data
recon_faces, recon_face_points, recon_edges, recon_edge_points, recon_vertices, recon_vertex_points = get_data(
recon_shape, v_num_per_m)
# Topology
recon_face_edge, recon_edge_vertex = get_topology(recon_faces, recon_edges, recon_vertices)
except:
recon_face_points = [np.zeros((1, 6), dtype=np.float32)]
recon_edge_points = [np.zeros((1, 6), dtype=np.float32)]
recon_vertex_points = [np.zeros((1, 3), dtype=np.float32)]
recon_face_edge = {}
recon_edge_vertex = {}
# GT
_, gt_shape = check_step_valid_soild(gt_root / folder_name / "normalized_shape.step", return_shape=True)
gt_faces, gt_face_points, gt_edges, gt_edge_points, gt_vertices, gt_vertex_points = get_data(gt_shape, v_num_per_m)
gt_face_edge, gt_edge_vertex = get_topology(gt_faces, gt_edges, gt_vertices)
# Chamfer
face_acc_cd, face_com_cd, face_cd = get_chamfer(recon_face_points, gt_face_points)
edge_acc_cd, edge_com_cd, edge_cd = get_chamfer(recon_edge_points, gt_edge_points)
vertex_acc_cd, vertex_com_cd, vertex_cd = get_chamfer(recon_vertex_points, gt_vertex_points)
# Detection
id_recon_gt_face, id_gt_recon_face, cost_face = get_match_ids(recon_face_points, gt_face_points)
id_recon_gt_edge, id_gt_recon_edge, cost_edge = get_match_ids(recon_edge_points, gt_edge_points)
id_recon_gt_vertex, id_gt_recon_vertex, cost_vertices = get_match_ids(recon_vertex_points, gt_vertex_points)
face_fscore, face_pre, face_rec = get_detection(id_recon_gt_face, id_gt_recon_face, cost_face)
edge_fscore, edge_pre, edge_rec = get_detection(id_recon_gt_edge, id_gt_recon_edge, cost_edge)
vertex_fscore, vertex_pre, vertex_rec = get_detection(id_recon_gt_vertex, id_gt_recon_vertex, cost_vertices)
fe_fscore, fe_pre, fe_rec = get_topo_detection(recon_face_edge, gt_face_edge, id_recon_gt_face, id_recon_gt_edge)
ev_fscore, ev_pre, ev_rec = get_topo_detection(recon_edge_vertex, gt_edge_vertex, id_recon_gt_edge,
id_recon_gt_vertex)
results = {
"face_cd": face_cd,
"edge_cd": edge_cd,
"vertex_cd": vertex_cd,
"face_fscore": face_fscore,
"edge_fscore": edge_fscore,
"vertex_fscore": vertex_fscore,
"fe_fscore": fe_fscore,
"ev_fscore": ev_fscore,
"face_acc_cd": face_acc_cd,
"edge_acc_cd": edge_acc_cd,
"vertex_acc_cd": vertex_acc_cd,
"face_com_cd": face_com_cd,
"edge_com_cd": edge_com_cd,
"vertex_com_cd": vertex_com_cd,
"fe_pre": fe_pre,
"ev_pre": ev_pre,
"fe_rec": fe_rec,
"ev_rec": ev_rec,
"vertex_pre": vertex_pre,
"edge_pre": edge_pre,
"face_pre": face_pre,
"vertex_rec": vertex_rec,
"edge_rec": edge_rec,
"face_rec": face_rec,
"num_recon_face": len(recon_face_points),
"num_gt_face": len(gt_face_points),
"num_recon_edge": len(recon_edge_points),
"num_gt_edge": len(gt_edge_points),
"num_recon_vertex": len(recon_vertex_points),
"num_gt_vertex": len(gt_vertex_points),
}
np.savez_compressed(eval_root / folder_name / 'eval.npz', results=results, allow_pickle=True)
if __name__ == '__main__':
parser = argparse.ArgumentParser(description='Evaluate The Generated Brep')
parser.add_argument('--eval_root', type=str, required=True)
parser.add_argument('--gt_root', type=str, required=True)
parser.add_argument('--use_ray', action='store_true')
parser.add_argument('--num_cpus', type=int, default=16)
parser.add_argument('--prefix', type=str, default='')
parser.add_argument('--list', type=str, default='')
parser.add_argument('--from_scratch', action='store_true')
parser.add_argument('--is_point2cad', action='store_true')
parser.add_argument('--only_valid', action='store_true')
args = parser.parse_args()
eval_root = Path(args.eval_root)
gt_root = Path(args.gt_root)
is_use_ray = args.use_ray
num_cpus = args.num_cpus
listfile = args.list
from_scratch = args.from_scratch
is_point2cad = args.is_point2cad
only_valid = args.only_valid
if not os.path.exists(eval_root):
raise ValueError(f"Data root path {eval_root} does not exist.")
if not os.path.exists(gt_root):
raise ValueError(f"Output root path {gt_root} does not exist.")
if args.prefix != '':
eval_one(eval_root, gt_root, args.prefix, is_point2cad)
exit()
all_folders = [folder for folder in os.listdir(eval_root) if os.path.isdir(eval_root / folder)]
ori_length = len(all_folders)
if listfile != '':
valid_names = [item.strip() for item in open(listfile, 'r').readlines()]
all_folders = list(set(all_folders) & set(valid_names))
all_folders.sort()
print(f"Total {len(all_folders)}/{ori_length} folders to evaluate")
if not from_scratch:
print("Filtering the folders that have eval.npz")
all_folders = [folder for folder in all_folders if not os.path.exists(eval_root / folder / 'eval.npz')]
print(f"Total {len(all_folders)} folders to compute after caching")
if not is_use_ray:
# random.shuffle(self.folder_names)
for i in tqdm(range(len(all_folders))):
eval_one(eval_root, gt_root, all_folders[i], is_point2cad)
else:
ray.init(
dashboard_host="0.0.0.0",
dashboard_port=8080,
num_cpus=num_cpus,
# local_mode=True
)
eval_one_remote = ray.remote(max_retries=0)(eval_one_with_try)
tasks = []
timeout_cancel_list = []
for i in range(len(all_folders)):
tasks.append(eval_one_remote.remote(eval_root, gt_root, all_folders[i], is_point2cad))
results = []
for i in tqdm(range(len(all_folders))):
try:
results.append(ray.get(tasks[i], timeout=60 * 3))
except ray.exceptions.GetTimeoutError:
results.append(None)
timeout_cancel_list.append(all_folders[i])
ray.cancel(tasks[i])
except:
results.append(None)
results = [item for item in results if item is not None]
print(f"Cancel for timeout: {timeout_cancel_list}")
print("Computing statistics...")
compute_statistics(eval_root, only_valid, listfile)
print("Done")