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MODULE: DATA EXPLORATION (ADVANCED EDA) - VERSION PROFESSIONNELLE
========================================================================
Analyses hospitalières : Démographie, Flux, Occupation, Stocks et Clustering
"""
import streamlit as st
import pandas as pd
import numpy as np
import plotly.express as px
import plotly.graph_objects as go
from datetime import datetime
# Vérification des dépendances statistiques
try:
from sklearn.cluster import KMeans
from sklearn.preprocessing import StandardScaler
from scipy import stats
STATS_AVAILABLE = True
except ImportError:
STATS_AVAILABLE = False
# Import de ton moteur ETL (Assure-toi que le chemin est correct)
try:
from module.Validation_Contract import ETL_Engine
except ImportError:
st.error("Le module ETL_Engine est introuvable. Vérifiez l'arborescence.")
# =====================================================
# ============= CACHE ETL =============================
# =====================================================
@st.cache_data(show_spinner=False, ttl=3600)
def cached_run_etl(_gspread_client, sheet_name):
etl = ETL_Engine(_gspread_client, sheet_name)
return etl.run_etl()
# =====================================================
# ============= ANALYSEUR AVANCÉ ======================
# =====================================================
class HospitalAdvancedAnalyzer:
def __init__(self, gspread_client, sheet_name):
self.client = gspread_client
self.sheet_name = sheet_name
self.dataframes_raw = {}
self.dataframes_clean = {}
def load_data(self):
"""Charge et prépare les données une seule fois"""
success, result = cached_run_etl(self.client, self.sheet_name)
if success:
self.dataframes_raw = result.dataframes_raw
self.dataframes_clean = result.dataframes_clean
return True
return False
def get_df(self, keyword):
"""Récupération intelligente des tables Clean"""
for k, df in self.dataframes_clean.items():
if keyword.lower() in k.lower():
return df.copy()
return None
# ========== 1. DÉMOGRAPHIE ==========
def plot_pyramide_ages(self):
st.markdown("### Pyramide des Âges")
df = self.get_df('patients')
if df is None: return
df = df[(df['age'] >= 0) & (df['age'] <= 110)].copy()
bins = [0, 18, 30, 45, 60, 75, 120]
labels = ['0-18', '19-30', '31-45', '46-60', '61-75', '75+']
df['age_group'] = pd.cut(df['age'], bins=bins, labels=labels, right=False)
pyramid = df.groupby(['age_group', 'sexe'], observed=False).size().reset_index(name='count')
fig = go.Figure()
# Hommes (valeurs négatives pour l'orientation à gauche)
males = pyramid[pyramid['sexe'] == 'M']
fig.add_trace(go.Bar(y=males['age_group'], x=-males['count'], name='Hommes',
orientation='h', marker_color='steelblue', hoverinfo='x+y'))
# Femmes (à droite)
females = pyramid[pyramid['sexe'] == 'F']
fig.add_trace(go.Bar(y=females['age_group'], x=females['count'], name='Femmes',
orientation='h', marker_color='pink', hoverinfo='x+y'))
fig.update_layout(
title='Répartition par Sexe et Tranche d\'Âge',
barmode='overlay',
xaxis=dict(title='Nombre de Patients', tickmode='array',
tickvals=[-100, -50, 0, 50, 100], # Ajuster selon volume
ticktext=['100', '50', '0', '50', '100']),
height=500
)
st.plotly_chart(fig, use_container_width=True)
def plot_geographic_distribution(self):
st.markdown("### Répartition Géographique")
df = self.get_df('patients')
if df is None: return
col1, col2 = st.columns(2)
with col1:
top_villes = df['ville'].value_counts().head(10).reset_index()
fig = px.bar(top_villes, x='ville', y='count', title="Top 10 Villes", color='count')
st.plotly_chart(fig, use_container_width=True)
with col2:
fig_cp = px.treemap(df, path=[px.Constant("Total"), 'code_postal'], title="Répartition par CP")
st.plotly_chart(fig_cp, use_container_width=True)
# ========== 2. PATHOLOGIES ==========
def plot_pathologies_analysis(self):
st.markdown("### Analyse des Pathologies")
df = self.get_df('sejours')
if df is None: return
stats_patho = df.groupby('pathologie_code').agg({
'stay_id': 'count',
'gravite_1_5': 'mean',
'duree_sejour_jours': 'mean'
}).reset_index().sort_values('stay_id', ascending=False).head(15)
fig = px.scatter(stats_patho, x='gravite_1_5', y='duree_sejour_jours', size='stay_id',
color='pathologie_code', title="Gravité vs Durée de séjour (Taille = Volume)")
st.plotly_chart(fig, use_container_width=True)
# ========== 3. FLUX & SANKEY ==========
def plot_service_flow(self):
st.markdown("### Flux Patients inter-services")
df = self.get_df('sejours')
if df is None: return
df = df.sort_values(['patient_id', 'date_entree'])
df['service_prev'] = df.groupby('patient_id')['service_code'].shift(1)
transfers = df[df['service_prev'].notna() & (df['service_code'] != df['service_prev'])]
if transfers.empty:
st.info("Aucun transfert inter-services détecté.")
return
flow = transfers.groupby(['service_prev', 'service_code']).size().reset_index(name='value')
nodes = list(pd.concat([flow['service_prev'], flow['service_code']]).unique())
node_map = {name: i for i, name in enumerate(nodes)}
fig = go.Figure(go.Sankey(
node=dict(pad=15, thickness=20, label=nodes),
link=dict(source=flow['service_prev'].map(node_map),
target=flow['service_code'].map(node_map),
value=flow['value'])
))
st.plotly_chart(fig, use_container_width=True)
# ========== 4. TEMPOREL & SAISONNALITÉ ==========
def plot_temporal_evolution(self):
st.markdown("### Évolution des Admissions")
df = self.get_df('admissions_jour')
if df is None: return
df['date'] = pd.to_datetime(df['date'])
df['nb_admissions'] = pd.to_numeric(df['nb_admissions'], errors='coerce')
# Séries par mois
df['mois'] = df['date'].dt.to_period('M').dt.to_timestamp()
monthly = df.groupby(['mois', 'service_code'])['nb_admissions'].sum().reset_index()
fig = px.line(monthly, x='mois', y='nb_admissions', color='service_code', markers=True)
st.plotly_chart(fig, use_container_width=True)
def plot_seasonality_analysis(self):
st.markdown("### Saisonnalité Hebdomadaire")
df = self.get_df('admissions_jour')
if df is None: return
df['date'] = pd.to_datetime(df['date'])
df['day_num'] = df['date'].dt.weekday
df['day_name'] = df['date'].dt.day_name()
# Tri automatique Lundi -> Dimanche
day_stats = df.groupby(['day_num', 'day_name'])['nb_admissions'].mean().reset_index().sort_values('day_num')
fig = px.bar(day_stats, x='day_name', y='nb_admissions', color='nb_admissions',
title="Moyenne d'admissions par jour")
st.plotly_chart(fig, use_container_width=True)
# ========== 5. RESSOURCES & TENSIONS ==========
def plot_occupation_analysis(self):
st.markdown("### Occupation des Lits")
df = self.get_df('ressources_jour')
if df is None: return
df['taux_pct'] = pd.to_numeric(df['taux_occupation'], errors='coerce') * 100
avg_occ = df.groupby('service_code')['taux_pct'].mean().reset_index().sort_values('taux_pct', ascending=False)
fig = px.bar(avg_occ, x='service_code', y='taux_pct', text_auto='.1f',
title="Taux d'occupation moyen (%)", color='taux_pct', color_continuous_scale='Reds')
fig.add_hline(y=100, line_dash="dash", line_color="red")
st.plotly_chart(fig, use_container_width=True)
def plot_workload_analysis(self):
st.markdown("### Charge de Travail (Tension)")
df = self.get_df('ressources_jour')
if df is None: return
fig = px.box(df, x='service_code', y='tension_personnel', color='service_code',
title="Distribution de la tension du personnel (1.0 = Seuil critique)")
st.plotly_chart(fig, use_container_width=True)
# ========== 6. STOCKS ==========
def plot_stock_analysis(self):
st.markdown("### État des Stocks")
df = self.get_df('stock_materiel_jour')
if df is None: return
stock_avg = df.groupby('materiel_code').agg({'stock_disponible': 'mean', 'tension_stock': 'mean'}).reset_index()
fig = px.bar(stock_avg, x='materiel_code', y='stock_disponible', color='tension_stock',
title="Stock Moyen vs Tension", color_continuous_scale='RdYlGn_r')
st.plotly_chart(fig, use_container_width=True)
# ========== 7. CLUSTERING & STATS ==========
def plot_patient_clustering(self):
st.markdown("### Segmentation Patients (K-Means)")
if not STATS_AVAILABLE:
st.warning("Bibliothèques scikit-learn manquantes.")
return
df_pat = self.get_df('patients')
df_sej = self.get_df('sejours')
if df_pat is None or df_sej is None: return
# Préparation des features
feat = df_sej.groupby('patient_id').agg({'stay_id': 'count', 'duree_sejour_jours': 'mean', 'gravite_1_5': 'mean'}).reset_index()
feat = feat.merge(df_pat[['patient_id', 'age']], on='patient_id').dropna()
if len(feat) < 10: return
# Clustering
X = feat[['age', 'stay_id', 'duree_sejour_jours', 'gravite_1_5']]
scaler = StandardScaler()
X_scaled = scaler.fit_transform(X)
kmeans = KMeans(n_clusters=3, random_state=42, n_init=10)
feat['cluster'] = kmeans.fit_predict(X_scaled).astype(str)
fig = px.scatter_3d(feat, x='age', y='stay_id', z='gravite_1_5', color='cluster',
title="Clusters de patients", labels={'stay_id': 'Nb Séjours'})
st.plotly_chart(fig, use_container_width=True)
def plot_statistical_tests(self):
st.markdown("### Analyse de Variance (ANOVA)")
df = self.get_df('sejours')
if df is None or not STATS_AVAILABLE: return
# ANOVA: Durée de séjour entre les 4 plus gros services
top_services = df['service_code'].value_counts().head(4).index
groups = [df[df['service_code'] == s]['duree_sejour_jours'].dropna() for s in top_services]
f_stat, p_val = stats.f_oneway(*groups)
c1, c2 = st.columns(2)
c1.metric("F-Statistic", f"{f_stat:.2f}")
c2.metric("P-Value", f"{p_val:.4f}")
if p_val < 0.05:
st.success("Il existe une différence statistiquement significative entre les services.")
else:
st.info("Pas de différence significative démontrée.")
# ========== 8. EXPORT DONNÉES ==========
def get_all_metrics_dataframes(self):
"""Génère un dictionnaire de tous les tableaux d'analyse pour export"""
exports = {}
# 1. Démographie
df_pat = self.get_df('patients')
if df_pat is not None:
# Répartition Villes
exports['demographie_villes'] = df_pat['ville'].value_counts().reset_index(name='nombre_patients')
# Répartition Ages (Simplifiée)
exports['demographie_ages'] = df_pat[['age', 'sexe']].describe().reset_index()
# 2. Pathologies (Stats agrégées)
df_sej = self.get_df('sejours')
if df_sej is not None:
patho_stats = df_sej.groupby('pathologie_code').agg({
'stay_id': 'count',
'gravite_1_5': 'mean',
'duree_sejour_jours': 'mean'
}).reset_index()
patho_stats.columns = ['Pathologie', 'Nb Séjours', 'Gravité Moyenne', 'Durée Moyenne']
exports['analyse_pathologies'] = patho_stats
# 3. Admissions Mensuelles
df_adm = self.get_df('admissions_jour')
if df_adm is not None:
df_adm['date'] = pd.to_datetime(df_adm['date'])
df_adm['nb_admissions'] = pd.to_numeric(df_adm['nb_admissions'], errors='coerce')
monthly = df_adm.set_index('date').resample('M')['nb_admissions'].sum().reset_index()
exports['admissions_mensuelles'] = monthly
# 4. Occupation & RH
df_res = self.get_df('ressources_jour')
if df_res is not None:
rh_stats = df_res.groupby('service_code').agg({
'taux_occupation': 'mean',
'tension_personnel': 'mean',
'lits_occupes': 'max'
}).reset_index()
exports['analyse_services_rh'] = rh_stats
# 5. Stocks
df_stock = self.get_df('stock_materiel_jour')
if df_stock is not None:
stock_stats = df_stock.groupby('materiel_code').agg({
'stock_disponible': 'mean',
'tension_stock': 'mean',
'alerte_stock': 'sum'
}).reset_index()
exports['analyse_stocks'] = stock_stats
return exports
# =====================================================
# ============= INTERFACE STREAMLIT ===================
# =====================================================
def show_terminal(client, sheet_name):
st.markdown('## DATA LAB : EXPLORATION AVANCÉE')
if 'hospital_analyzer' not in st.session_state:
st.session_state.hospital_analyzer = HospitalAdvancedAnalyzer(client, sheet_name)
analyzer = st.session_state.hospital_analyzer
if not analyzer.dataframes_clean:
with st.spinner('Chargement du Lab...'):
if not analyzer.load_data():
st.error("Erreur de connexion aux données.")
return
st.rerun()
# --- AJOUT DE L'ONGLET "📥 Export" ---
tabs = st.tabs([
" Démographie", " Pathos", " Flux", " Temps",
" Lits", " RH", " Stocks", " Clusters", " Stats", "📥 Export"
])
with tabs[0]:
analyzer.plot_pyramide_ages()
analyzer.plot_geographic_distribution()
with tabs[1]: analyzer.plot_pathologies_analysis()
with tabs[2]: analyzer.plot_service_flow()
with tabs[3]:
analyzer.plot_temporal_evolution()
analyzer.plot_seasonality_analysis()
with tabs[4]: analyzer.plot_occupation_analysis()
with tabs[5]: analyzer.plot_workload_analysis()
with tabs[6]: analyzer.plot_stock_analysis()
with tabs[7]: analyzer.plot_patient_clustering()
with tabs[8]: analyzer.plot_statistical_tests()
# --- LOGIQUE DE L'ONGLET EXPORT ---
with tabs[9]:
st.markdown("### Téléchargement des Rapports d'Analyse")
st.caption("Téléchargez les résultats agrégés calculés par le Data Lab au format CSV.")
# Récupération des données
metrics_data = analyzer.get_all_metrics_dataframes()
if metrics_data:
col1, col2 = st.columns(2)
# Affichage en deux colonnes pour être propre
for i, (name, df) in enumerate(metrics_data.items()):
# Alternance des colonnes
col = col1 if i % 2 == 0 else col2
with col:
# Conversion en CSV
csv = df.to_csv(index=False).encode('utf-8-sig') # utf-8-sig pour compatibilité Excel
st.download_button(
label=f" {name.replace('_', ' ').title()} (.csv)",
data=csv,
file_name=f"datalab_{name}_{datetime.now().strftime('%Y%m%d')}.csv",
mime='text/csv',
use_container_width=True
)
# Petit aperçu (optionnel)
with st.expander(f" Aperçu : {name}"):
st.dataframe(df.head(5), use_container_width=True)
else:
st.warning("Aucune donnée d'analyse disponible pour l'export.") |