Update src/streamlit_app.py
Browse files- src/streamlit_app.py +134 -99
src/streamlit_app.py
CHANGED
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@@ -14,20 +14,26 @@ from scipy.spatial import cKDTree
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from huggingface_hub import hf_hub_download
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from streamlit_image_coordinates import streamlit_image_coordinates
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# ---
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IMAGENET_MEAN = (0.485, 0.456, 0.406)
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IMAGENET_STD = (0.229, 0.224, 0.225)
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st.set_page_config(layout="wide", page_title="Prior2DSM Research
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@st.cache_resource
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def load_models(repo_id, dav_file, dino_file, m_size):
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device = "cuda" if torch.cuda.is_available() else "cpu"
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dav_path = hf_hub_download(repo_id=repo_id, filename=dav_file)
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from depth_anything_v2.dpt import DepthAnythingV2
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configs = {
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dav_model = DepthAnythingV2(**configs[m_size])
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dav_model.load_state_dict(torch.load(dav_path, map_location="cpu", weights_only=True))
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dav_model = dav_model.to(device).eval()
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@@ -39,11 +45,12 @@ def load_models(repo_id, dav_file, dino_file, m_size):
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if "state_dict" in ckpt: ckpt = ckpt["state_dict"]
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clean_ckpt = {k.replace("module.", "").replace("backbone.", "").replace("teacher.backbone.", ""): v for k, v in ckpt.items()}
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dino_model.load_state_dict(clean_ckpt, strict=False)
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return dav_model, dino_model, device
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@st.cache_data(show_spinner=False)
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def
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# 1.
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img_448 = cv2.resize(rgb_raw.transpose(1, 2, 0), (448, 448))
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dav_in = torch.from_numpy(img_448).permute(2, 0, 1).unsqueeze(0).to(device).float() / 255.0
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with torch.no_grad():
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@@ -51,142 +58,170 @@ def run_backbone_inference(_dav, _dino, rgb_raw, h_f, w_f, device):
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if isinstance(rel_depth, (list, tuple)): rel_depth = rel_depth[-1]
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rel_depth = F.interpolate(rel_depth.unsqueeze(1), size=(h_f, w_f), mode="bilinear").squeeze().cpu().numpy()
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# 2. DINO
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img_1024 = cv2.resize(rgb_raw.transpose(1, 2, 0), (1024, 1024))
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dino_in = (torch.from_numpy(img_1024).permute(2, 0, 1).unsqueeze(0).to(device).float() / 255.0 - \
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torch.tensor(IMAGENET_MEAN, device=device).view(1,3,1,1)) / torch.tensor(IMAGENET_STD, device=device).view(1,3,1,1)
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with torch.no_grad():
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features = _dino.forward_features(dino_in)
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# ΧͺΧΧ§ΧΧ ΧΧΧΧΧΧ₯ ΧΧΧ§Χ ΧΧ ΧΧ ΧΧΧΧΧ¨ ΧΧΧΧΧ (dict)
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tokens = features.get('x_norm_patchtokens', features.get('main')) if isinstance(features, dict) else features[0]
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patch_tokens = tokens[:, 1:, :].squeeze(0).cpu().numpy()
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else:
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patch_tokens = tokens.squeeze(0).cpu().numpy()
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Hp, Wp = 1024 // 16, 1024 // 16
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# Generate PCA for visualization
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pca_obj = PCA(n_components=3, whiten=True)
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Z = pca_obj.fit_transform(patch_tokens).reshape(
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return rel_depth,
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#
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with st.sidebar:
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st.header("π
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rgb_file = st.file_uploader("Source RGB
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prior_file = st.file_uploader("Prior DSM
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mask_file = st.file_uploader("Change Mask
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mask_band = st.selectbox("Mask Band
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st.divider()
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repo = st.text_input("Repo ID", "osherr/Prior2DSM")
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dav_ckpt = st.text_input("DAV2 Weights", "depth_anything_v2_vitl.pth")
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dino_ckpt = st.text_input("DINO Weights", "dinov3_vitl16_pretrain_sat493m-eadcf0ff.pth")
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m_size = st.selectbox("DAV2 Encoder", ["vitl", "vitb", "vits"])
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#
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if rgb_file and prior_file and mask_file:
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dav_m, dino_m, dev = load_models(repo, dav_ckpt, dino_ckpt,
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with rasterio.open(BytesIO(rgb_file.read())) as src:
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rgb_raw = src.read([1, 2, 3])
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meta_full = src.profile
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with rasterio.open(BytesIO(prior_file.read())) as src:
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prior_data = src.read(1).astype(np.float32)
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h_f, w_f = prior_data.shape
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with rasterio.open(BytesIO(mask_file.getvalue())) as src:
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change_mask = src.read(mask_band) > 0
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rel_depth, patch_tokens, pca_viz, Hp, Wp = run_backbone_inference(dav_m, dino_m, rgb_raw, h_f, w_f, dev)
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st.header("π¬ Research Diagnostics")
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tab_vis, tab_knn, tab_refine = st.tabs(["πΌοΈ Visual Maps", "π― KNN Analysis", "π SSI Refinement"])
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viz_rgb = np.clip(rgb_raw.transpose(1, 2, 0) / (np.percentile(rgb_raw, 98) + 1e-6), 0, 1)
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with col1:
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st.subheader("Semantic PCA (DINO)")
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st.image(pca_viz.transpose(1, 2, 0), use_container_width=True)
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with col2:
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st.subheader("Relative Depth (DAV2)")
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fig_d, ax_d = plt.subplots()
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ax_d.imshow(rel_depth, cmap='magma')
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ax_d.axis('off')
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st.pyplot(fig_d)
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with col3:
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st.subheader("Change Mask")
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st.image(change_mask.astype(float), use_container_width=True)
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with tab_knn:
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viz_small = (cv2.resize(viz_rgb, (640, 640)) * 255).astype(np.uint8)
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p_click = streamlit_image_coordinates(viz_small, key="diag_click")
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if p_click:
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tx, ty = int(p_click['x']*(w_f/640)), int(p_click['y']*(h_f/640))
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valid_logic = np.isfinite(prior_data) & (~change_mask)
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# Match PCA map to full resolution for retrieval
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pca_full = F.normalize(torch.from_numpy(pca_viz), p=2, dim=0).numpy()
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valid_pca = pca_full[:, valid_logic].T
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tree = cKDTree(valid_pca)
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#
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D_dav_s = ((D_dav_t - D_dav_t.mean()) / (D_dav_t.std() + 1e-6)) * D_prior_t.std() + D_prior_t.mean()
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D_dav_s = D_dav_s.detach() # ΧΧ©ΧΧ ΧΧΧΧ ΧΧΧ ΧΧ’Χͺ Backward Χ©ΧΧΧΧ
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for _ in range(350):
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D_dav_s - F.avg_pool2d(D_dav_s, 5, 1, 2))
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(1500 * l_anchor + 200 * l_geom).backward()
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optimizer.step()
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res = D_opt.detach().squeeze().cpu().numpy()
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buf = BytesIO(); meta_full.update(count=1, dtype="float32")
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with rasterio.open(buf, "w", **meta_full) as dst: dst.write(res, 1)
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st.success("
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st.download_button("
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else:
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st.info("
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from huggingface_hub import hf_hub_download
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from streamlit_image_coordinates import streamlit_image_coordinates
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# --- CONFIG & INITIALIZATION ---
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IMAGENET_MEAN = (0.485, 0.456, 0.406)
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IMAGENET_STD = (0.229, 0.224, 0.225)
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st.set_page_config(layout="wide", page_title="Prior2DSM Research Suite")
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if 'bbox_coords' not in st.session_state:
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st.session_state.bbox_coords = []
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# --- MODEL LOADING (Safe Init) ---
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@st.cache_resource
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def load_models(repo_id, dav_file, dino_file, m_size):
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device = "cuda" if torch.cuda.is_available() else "cpu"
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dav_path = hf_hub_download(repo_id=repo_id, filename=dav_file)
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from depth_anything_v2.dpt import DepthAnythingV2
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configs = {
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'vits': {'encoder': 'vits', 'features': 64, 'out_channels': [48, 96, 192, 384]},
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'vitb': {'encoder': 'vitb', 'features': 128, 'out_channels': [96, 192, 384, 768]},
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'vitl': {'encoder': 'vitl', 'features': 256, 'out_channels': [256, 512, 1024, 1024]}
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}
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dav_model = DepthAnythingV2(**configs[m_size])
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dav_model.load_state_dict(torch.load(dav_path, map_location="cpu", weights_only=True))
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dav_model = dav_model.to(device).eval()
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if "state_dict" in ckpt: ckpt = ckpt["state_dict"]
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clean_ckpt = {k.replace("module.", "").replace("backbone.", "").replace("teacher.backbone.", ""): v for k, v in ckpt.items()}
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dino_model.load_state_dict(clean_ckpt, strict=False)
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return dav_model, dino_model, device
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@st.cache_data(show_spinner=False)
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def run_full_inference(_dav, _dino, rgb_raw, h_f, w_f, device):
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# 1. DAV2 Depth
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img_448 = cv2.resize(rgb_raw.transpose(1, 2, 0), (448, 448))
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dav_in = torch.from_numpy(img_448).permute(2, 0, 1).unsqueeze(0).to(device).float() / 255.0
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with torch.no_grad():
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if isinstance(rel_depth, (list, tuple)): rel_depth = rel_depth[-1]
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rel_depth = F.interpolate(rel_depth.unsqueeze(1), size=(h_f, w_f), mode="bilinear").squeeze().cpu().numpy()
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# 2. DINO PCA
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img_1024 = cv2.resize(rgb_raw.transpose(1, 2, 0), (1024, 1024))
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dino_in = (torch.from_numpy(img_1024).permute(2, 0, 1).unsqueeze(0).to(device).float() / 255.0 - \
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torch.tensor(IMAGENET_MEAN, device=device).view(1,3,1,1)) / torch.tensor(IMAGENET_STD, device=device).view(1,3,1,1)
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with torch.no_grad():
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features = _dino.forward_features(dino_in)
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tokens = features.get('x_norm_patchtokens', features.get('main')) if isinstance(features, dict) else features[0]
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patch_tokens = tokens[:, 1:, :].squeeze(0).cpu().numpy()
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pca_obj = PCA(n_components=3, whiten=True)
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Z = pca_obj.fit_transform(patch_tokens).reshape(64, 64, 3).transpose(2, 0, 1)
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pca_full = F.interpolate(torch.from_numpy(Z).unsqueeze(0).float(), size=(h_f, w_f), mode="bilinear").squeeze(0)
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pca_map = F.normalize(pca_full, p=2, dim=0).numpy()
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return rel_depth, pca_map
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# --- SIDEBAR ---
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with st.sidebar:
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st.header("π Research Data")
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rgb_file = st.file_uploader("Source RGB", type=["tif", "tiff"])
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prior_file = st.file_uploader("Prior DSM", type=["tif", "tiff"])
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mask_file = st.file_uploader("Change Mask", type=["tif", "tiff"])
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mask_band = st.selectbox("Mask Band", [1, 2, 3], index=1)
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st.divider()
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K_val = st.slider("K Neighbors (Diagnostic)", 5, 50, 15)
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repo = st.text_input("Repo ID", "osherr/Prior2DSM")
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dav_ckpt = st.text_input("DAV2 Weights", "depth_anything_v2_vitl.pth")
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dino_ckpt = st.text_input("DINO Weights", "dinov3_vitl16_pretrain_sat493m-eadcf0ff.pth")
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# --- MAIN LOGIC ---
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if rgb_file and prior_file and mask_file:
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dav_m, dino_m, dev = load_models(repo, dav_ckpt, dino_ckpt, "vitl")
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with rasterio.open(BytesIO(rgb_file.read())) as src:
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rgb_raw = src.read([1, 2, 3])
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h_f, w_f = src.height, src.width
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meta_full = src.profile
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with rasterio.open(BytesIO(prior_file.read())) as src:
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prior_data = src.read(1).astype(np.float32)
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with rasterio.open(BytesIO(mask_file.getvalue())) as src:
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change_mask = src.read(mask_band) > 0
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rel_depth, pca_map = run_full_inference(dav_m, dino_m, rgb_raw, h_f, w_f, dev)
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tab_diag, tab_bbox, tab_ssi = st.tabs(["π¬ Point Diagnostic", "β Grid/BBOX Update", "π Final SSI"])
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# --- TAB 1: INTERACTIVE DIAGNOSTIC (YOUR LOGIC) ---
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with tab_diag:
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st.subheader("Spatial + Semantic Metric Diagnostic")
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viz_rgb = np.clip(rgb_raw.transpose(1, 2, 0) / (np.percentile(rgb_raw, 98) + 1e-6), 0, 1)
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viz_small = (cv2.resize(viz_rgb, (640, 640)) * 255).astype(np.uint8)
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col_map, col_res = st.columns([1, 1])
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with col_map:
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p_click = streamlit_image_coordinates(viz_small, key="diag_click")
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if p_click:
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tx, ty = int(p_click['x']*(w_f/640)), int(p_click['y']*(h_f/640))
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# Logic: valid anchors
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valid_logic = np.isfinite(prior_data) & (~change_mask)
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valid_coords = np.argwhere(valid_logic)
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valid_pca = pca_map[:, valid_logic].T
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pca_tree = cKDTree(valid_pca)
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# 1. Search candidates by PCA (Semantic match)
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target_pca = pca_map[:, ty, tx]
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dist, idx = pca_tree.query(target_pca, k=100) # Start with 100
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c_pred = rel_depth[valid_logic][idx]
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c_metric = prior_data[valid_logic][idx]
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c_coords = valid_coords[idx]
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# 2. Filter by Physical distance (Spatial match) - Use 20
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spatial_dists = np.sqrt((c_coords[:, 0] - ty)**2 + (c_coords[:, 1] - tx)**2)
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| 136 |
+
spatial_indices = np.argsort(spatial_dists)[:20]
|
| 137 |
+
s_pred, s_metric, s_coords = c_pred[spatial_indices], c_metric[spatial_indices], c_coords[spatial_indices]
|
| 138 |
+
|
| 139 |
+
# 3. Final Geometric filter - Use 10 (K=10)
|
| 140 |
+
target_rel = rel_depth[ty, tx]
|
| 141 |
+
depth_diff = np.abs(s_pred - target_rel)
|
| 142 |
+
final_indices = np.argsort(depth_diff)[:10]
|
| 143 |
+
rejected_indices = np.argsort(depth_diff)[10:]
|
| 144 |
+
|
| 145 |
+
k_pred, k_metric, k_coords = s_pred[final_indices], s_metric[final_indices], s_coords[final_indices]
|
| 146 |
+
r_coords = s_coords[rejected_indices]
|
| 147 |
+
|
| 148 |
+
# Local Fit
|
| 149 |
+
local_model = LinearRegression().fit(k_pred.reshape(-1, 1), k_metric)
|
| 150 |
+
pred_h = local_model.predict([[target_rel]])[0]
|
| 151 |
+
|
| 152 |
+
with col_res:
|
| 153 |
+
st.metric("Estimated Local Elevation", f"{pred_h:.2f} m")
|
| 154 |
+
fig, ax = plt.subplots(1, 2, figsize=(12, 5))
|
| 155 |
+
# Map view with points
|
| 156 |
+
ax[0].imshow(viz_rgb)
|
| 157 |
+
ax[0].scatter(r_coords[:, 1], r_coords[:, 0], color='red', marker='x', s=10, label='Rejected')
|
| 158 |
+
ax[0].scatter(k_coords[:, 1], k_coords[:, 0], color='lawngreen', s=25, label='Anchors')
|
| 159 |
+
ax[0].scatter([tx], [ty], color='cyan', marker='P', s=80, label='Target')
|
| 160 |
+
ax[0].set_title("Anchor Spatial Selection")
|
| 161 |
+
ax[0].legend()
|
| 162 |
+
|
| 163 |
+
# Scatter view
|
| 164 |
+
ax[1].scatter(s_pred, s_metric, color='red', marker='x', alpha=0.3)
|
| 165 |
+
ax[1].scatter(k_pred, k_metric, color='lawngreen', s=50, edgecolors='black')
|
| 166 |
+
xr = np.linspace(s_pred.min(), s_pred.max(), 100).reshape(-1, 1)
|
| 167 |
+
ax[1].plot(xr, local_model.predict(xr), 'b-', label='Local Fit')
|
| 168 |
+
ax[1].scatter([target_rel], [pred_h], color='cyan', marker='*', s=150)
|
| 169 |
+
ax[1].set_title("Metric Regression")
|
| 170 |
+
st.pyplot(fig)
|
| 171 |
+
|
| 172 |
+
# --- TAB 2: BBOX / GRID UPDATE ---
|
| 173 |
+
with tab_bbox:
|
| 174 |
+
st.subheader("Select Coordinate Range for Update")
|
| 175 |
+
# Draw prior with grid
|
| 176 |
+
fig_g, ax_g = plt.subplots(figsize=(10, 10))
|
| 177 |
+
ax_g.imshow(prior_data, cmap='terrain')
|
| 178 |
+
# Add grid
|
| 179 |
+
grid_space = 64
|
| 180 |
+
for x in range(0, w_f, grid_space): ax_g.axvline(x, color='white', alpha=0.2, lw=0.5)
|
| 181 |
+
for y in range(0, h_f, grid_space): ax_g.axhline(y, color='white', alpha=0.2, lw=0.5)
|
| 182 |
+
|
| 183 |
+
viz_grid = (cv2.resize(prior_data, (640, 640)) - prior_data.min()) / (prior_data.max() - prior_data.min())
|
| 184 |
+
p_bbox = streamlit_image_coordinates((viz_grid * 255).astype(np.uint8), key="bbox_sel")
|
| 185 |
+
|
| 186 |
+
if p_bbox:
|
| 187 |
+
bx, by = int(p_bbox['x']*(w_f/640)), int(p_bbox['y']*(h_f/640))
|
| 188 |
+
st.session_state.bbox_coords.append((bx, by))
|
| 189 |
+
|
| 190 |
+
if st.session_state.bbox_coords:
|
| 191 |
+
st.write(f"Points Selected: {st.session_state.bbox_coords}")
|
| 192 |
+
if st.button("Reset BBOX"):
|
| 193 |
+
st.session_state.bbox_coords = []
|
| 194 |
+
st.rerun()
|
| 195 |
+
|
| 196 |
+
# --- TAB 3: SSI OPTIMIZATION ---
|
| 197 |
+
with tab_ssi:
|
| 198 |
+
if st.button("π Run SSI Final Refinement"):
|
| 199 |
+
with st.spinner("Optimizing Surface..."):
|
| 200 |
+
D_dav_t = torch.from_numpy(rel_depth)[None, None].to(dev)
|
| 201 |
+
D_prior_t = torch.from_numpy(np.nan_to_num(prior_data)).to(dev).unsqueeze(0).unsqueeze(0)
|
| 202 |
|
| 203 |
+
# If BBOX selected, update mask
|
| 204 |
+
final_mask = change_mask.copy()
|
| 205 |
+
if len(st.session_state.bbox_coords) >= 2:
|
| 206 |
+
c1, c2 = st.session_state.bbox_coords[-2], st.session_state.bbox_coords[-1]
|
| 207 |
+
final_mask[min(c1[1], c2[1]):max(c1[1], c2[1]), min(c1[0], c2[0]):max(c1[0], c2[0])] = True
|
| 208 |
|
| 209 |
+
Anchor = torch.from_numpy((~final_mask).astype(np.float32)).to(dev).unsqueeze(0).unsqueeze(0)
|
| 210 |
+
D_opt = D_prior_t.clone().detach().requires_grad_(True)
|
| 211 |
+
opt = torch.optim.Adam([D_opt], lr=8e-3)
|
| 212 |
D_dav_s = ((D_dav_t - D_dav_t.mean()) / (D_dav_t.std() + 1e-6)) * D_prior_t.std() + D_prior_t.mean()
|
|
|
|
| 213 |
|
| 214 |
for _ in range(350):
|
| 215 |
+
opt.zero_grad()
|
| 216 |
+
l_a = F.mse_loss(D_opt * Anchor, D_prior_t * Anchor)
|
| 217 |
+
l_l = F.l1_loss(D_opt - F.avg_pool2d(D_opt, 5, 1, 2), D_dav_s.detach() - F.avg_pool2d(D_dav_s.detach(), 5, 1, 2))
|
| 218 |
+
(1500 * l_a + 200 * l_l).backward()
|
| 219 |
+
opt.step()
|
|
|
|
|
|
|
|
|
|
|
|
|
| 220 |
|
| 221 |
res = D_opt.detach().squeeze().cpu().numpy()
|
| 222 |
buf = BytesIO(); meta_full.update(count=1, dtype="float32")
|
| 223 |
with rasterio.open(buf, "w", **meta_full) as dst: dst.write(res, 1)
|
| 224 |
+
st.success("Refinement Complete!")
|
| 225 |
+
st.download_button("Download Refined DSM", buf.getvalue(), "refined.tif")
|
| 226 |
else:
|
| 227 |
+
st.info("Upload Assets to begin.")
|