othmanekabal commited on
Commit
78a5aa6
·
verified ·
1 Parent(s): 44f029b

Use TDGBench 2.0.0rc5 installation command

Browse files
assets/js/data/catalog.js CHANGED
@@ -22,7 +22,7 @@ var SHORT={MLP:'MLP',GCN:'GCN',GAT:'GAT',RGCN:'RGCN',TransEGCN_conv:'TransE-c',T
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  var METRICS={accuracy:'Accuracy',macro_f1:'Macro-F1',micro_f1:'Micro-F1'};
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  var EMBS=['sentence-transformers/all-MiniLM-L6-v2','sentence-transformers/all-mpnet-base-v2','BAAI/bge-small-en-v1.5'];
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  var CONVS=['GCNConv','SAGEConv','GraphConv','GATConv','GATv2Conv','RGCNConv','TransformerConv'];
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- var PIP_CPU='python -m pip install tdg-bench torch==2.5.1 torch_geometric==2.6.1 torch_scatter==2.1.2 torch_sparse==0.6.18 --index-url https://download.pytorch.org/whl/cpu --extra-index-url https://pypi.org/simple --find-links https://data.pyg.org/whl/torch-2.5.1+cpu.html';
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- var PIP_GPU='python -m pip install tdg-bench torch==2.5.1 torch_geometric==2.6.1 torch_scatter==2.1.2 torch_sparse==0.6.18 --index-url https://download.pytorch.org/whl/cu124 --extra-index-url https://pypi.org/simple --find-links https://data.pyg.org/whl/torch-2.5.1+cu124.html';
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  var HF_URL='https://huggingface.co/datasets/othmanekabal/TDGBench';
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  var SAMPLE_CSV='subject,predicate,object\nmetformin,treats,type 2 diabetes\ninsulin,treats,type 2 diabetes\ntype 2 diabetes,is_a,metabolic disease\nobesity,risk_factor_for,type 2 diabetes\nmetformin,interacts_with,cimetidine\naspirin,treats,headache\n aspirin,inhibits,COX-1\nCOX-1,part_of,prostaglandin pathway\nibuprofen,inhibits,COX-2\nCOX-2,located_in,inflamed tissue\nmetformin,treats,type 2 diabetes\ninsulin,related_to,insulin\nstatin,treats,hypercholesterolemia\nhypercholesterolemia,risk_factor_for,atherosclerosis\natherosclerosis,causes,myocardial infarction\naspirin,prevents,myocardial infarction\nstatin,inhibits,HMG-CoA reductase\nhypertension,risk_factor_for,stroke\nlisinopril,treats,hypertension\nlisinopril,inhibits,\nlosartan,treats,hypertension\nstroke,is_a,cerebrovascular disease\nmyocardial infarction,is_a,cardiovascular disease\natherosclerosis,is_a,cardiovascular disease\n';
 
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  var METRICS={accuracy:'Accuracy',macro_f1:'Macro-F1',micro_f1:'Micro-F1'};
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  var EMBS=['sentence-transformers/all-MiniLM-L6-v2','sentence-transformers/all-mpnet-base-v2','BAAI/bge-small-en-v1.5'];
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  var CONVS=['GCNConv','SAGEConv','GraphConv','GATConv','GATv2Conv','RGCNConv','TransformerConv'];
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+ var PIP_CPU='python -m pip install --pre tdg-bench==2.0.0rc5 torch==2.5.1 torch_geometric==2.6.1 torch_scatter==2.1.2 torch_sparse==0.6.18 --index-url https://download.pytorch.org/whl/cpu --extra-index-url https://test.pypi.org/simple/ --extra-index-url https://pypi.org/simple --find-links https://data.pyg.org/whl/torch-2.5.0+cpu.html';
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+ var PIP_GPU='python -m pip install --pre tdg-bench==2.0.0rc5 torch==2.5.1 torch_geometric==2.6.1 torch_scatter==2.1.2 torch_sparse==0.6.18 --index-url https://download.pytorch.org/whl/cu124 --extra-index-url https://test.pypi.org/simple/ --extra-index-url https://pypi.org/simple --find-links https://data.pyg.org/whl/torch-2.5.0+cu124.html';
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  var HF_URL='https://huggingface.co/datasets/othmanekabal/TDGBench';
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  var SAMPLE_CSV='subject,predicate,object\nmetformin,treats,type 2 diabetes\ninsulin,treats,type 2 diabetes\ntype 2 diabetes,is_a,metabolic disease\nobesity,risk_factor_for,type 2 diabetes\nmetformin,interacts_with,cimetidine\naspirin,treats,headache\n aspirin,inhibits,COX-1\nCOX-1,part_of,prostaglandin pathway\nibuprofen,inhibits,COX-2\nCOX-2,located_in,inflamed tissue\nmetformin,treats,type 2 diabetes\ninsulin,related_to,insulin\nstatin,treats,hypercholesterolemia\nhypercholesterolemia,risk_factor_for,atherosclerosis\natherosclerosis,causes,myocardial infarction\naspirin,prevents,myocardial infarction\nstatin,inhibits,HMG-CoA reductase\nhypertension,risk_factor_for,stroke\nlisinopril,treats,hypertension\nlisinopril,inhibits,\nlosartan,treats,hypertension\nstroke,is_a,cerebrovascular disease\nmyocardial infarction,is_a,cardiovascular disease\natherosclerosis,is_a,cardiovascular disease\n';
assets/js/pages/get-started.js CHANGED
@@ -1,7 +1,7 @@
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  /* Page : Get Started. */
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  function getStartedInstallCommand(s){
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  var platform=s.compute==='cuda'?'cu124':'cpu';
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- return 'python -m pip install tdg-bench torch==2.5.1 torch_geometric==2.6.1 torch_scatter==2.1.2 torch_sparse==0.6.18 --index-url https://download.pytorch.org/whl/'+platform+' --extra-index-url https://pypi.org/simple --find-links https://data.pyg.org/whl/torch-2.5.1+'+platform+'.html';
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  }
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  function getStartedEnvironmentCommand(s){
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  if(s.environment==='conda')return 'conda create --name tdgbench python=3.11 pip -y\nconda activate tdgbench\npython -m pip install --upgrade pip';
 
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  /* Page : Get Started. */
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  function getStartedInstallCommand(s){
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  var platform=s.compute==='cuda'?'cu124':'cpu';
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+ return 'python -m pip install --pre tdg-bench==2.0.0rc5 torch==2.5.1 torch_geometric==2.6.1 torch_scatter==2.1.2 torch_sparse==0.6.18 --index-url https://download.pytorch.org/whl/'+platform+' --extra-index-url https://test.pypi.org/simple/ --extra-index-url https://pypi.org/simple --find-links https://data.pyg.org/whl/torch-2.5.0+'+platform+'.html';
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  }
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  function getStartedEnvironmentCommand(s){
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  if(s.environment==='conda')return 'conda create --name tdgbench python=3.11 pip -y\nconda activate tdgbench\npython -m pip install --upgrade pip';