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"""
USLaP Migration Script: Excel โ SQLite relational schema
Extends build_database_v3.py to populate the full USLaP lattice database.
This script:
1. Creates uslap_lattice.db with the full relational schema (create_uslap_db.sql)
2. Reads data from structured Excel sheets (skip EXCEL_DATA_CONSOLIDATED)
3. Normalizes data into the relational schema with proper foreign keys
4. Registers Python UDF extract_consonants() from USLaP_Engine.py
5. Generates word_fingerprints table for O(log n) cluster expansion
6. Uses transaction safety with rollback on error
7. Creates backup of existing databases
ุจูุณูู
ู ุงูููููู ุงูุฑููุญูู
ููฐูู ุงูุฑููุญููู
ู
"""
import sqlite3
import openpyxl
import re
import sys
import os
import shutil
import json
from datetime import datetime
from pathlib import Path
# Add the current directory to sys.path to import USLaP_Engine
sys.path.insert(0, os.path.dirname(os.path.abspath(__file__)))
# ============================================================================
# GLOBAL CONFIGURATION
# ============================================================================
EXCEL_PATH = "USLaP_Final_Data_Consolidated_Master_v3.xlsx"
DB_PATH = "Code_files/uslap_lattice.db"
SCHEMA_PATH = "Code_files/create_uslap_db.sql"
BACKUP_DIR = "Code_files/backups"
# Sheets to migrate (structured data only, skip EXCEL_DATA_CONSOLIDATED)
SHEETS_TO_MIGRATE = [
"A1_ENTRIES",
"A1_ะะะะะกะ",
"PERSIAN_A1_MADฤKHIL",
"BITIG_A1_ENTRIES",
"CHILD_SCHEMA",
"A4_DERIVATIVES",
"A5_CROSS_REFS",
"A3_QURAN_REFS",
"M1_PHONETIC_SHIFTS",
"M2_DETECTION_PATTERNS",
"M4_NETWORKS",
"M3_SCHOLARS",
"M5_QUR_VERIFICATION",
"A2_NAMES_OF_ALLAH", # Added missing sheet
]
# ============================================================================
# UTILITY FUNCTIONS
# ============================================================================
def clean_column_name(col):
"""Convert Excel column header to valid SQLite column name."""
if col is None:
return "unknown"
col = str(col).strip()
col = re.sub(r'[^\w\s]', '', col) # Remove punctuation
col = re.sub(r'\s+', '_', col) # Replace spaces with underscore
col = col.lower()
if not col:
return "unknown"
return col
def find_header_row(ws, sheet_name):
"""Find the header row in an Excel sheet based on patterns."""
rows = list(ws.iter_rows(values_only=True))
# Special handling for each sheet based on debug output
if sheet_name == "CHILD_SCHEMA":
# Row 0: title, Row 1: description, Row 2: headers
if len(rows) > 2:
return rows[2], 3
elif sheet_name == "PHONETIC_REVERSAL":
# Row 0: title, Row 1: description, Row 2: zone header, Row 3: headers
if len(rows) > 3:
return rows[3], 4
elif sheet_name in ["UMD_OPERATIONS", "DP_REGISTER", "ATT_TERMS",
"SESSION_INDEX", "PROTOCOL_CORRECTIONS",
"SCHOLAR_WARNINGS", "A1_ENTRIES"]:
# Row 0: title/headers (most sheets)
if len(rows) > 0:
return rows[0], 1
else:
# Generic fallback: find row with typical column names
for i, row in enumerate(rows):
if row and any(isinstance(cell, str) and ('ID' in cell or 'NAME' in cell or 'CODE' in cell or 'TERM' in cell) for cell in row):
return row, i + 1
return None, 0
def backup_database(db_path):
"""Create a timestamped backup of existing database."""
if not os.path.exists(db_path):
return None
os.makedirs(BACKUP_DIR, exist_ok=True)
timestamp = datetime.now().strftime('%Y%m%d_%H%M%S')
backup_path = os.path.join(BACKUP_DIR, f"{os.path.basename(db_path)}_backup_{timestamp}.db")
shutil.copy2(db_path, backup_path)
print(f" Created backup: {backup_path}")
return backup_path
# ============================================================================
# EXTRACT_CONSONANTS UDF (from USLaP_Engine.py)
# ============================================================================
def extract_consonants(word):
"""
Python UDF for SQLite: Extract consonant skeleton from a word.
Must be registered before any operations on word_fingerprints table.
This is the same logic as PhoneticReversal.extract_consonants() in USLaP_Engine.py.
"""
if not word:
return ""
# Import the function directly from USLaP_Engine if available
try:
from USLaP_Engine import PhoneticReversal
# Create a minimal instance just to use the method
# We'll implement the logic directly here to avoid dependencies
pass
except ImportError:
pass
# Direct implementation from USLaP_Engine.py
vowels = set('aeiou')
result = []
i = 0
word_lower = word.lower()
while i < len(word_lower):
digraph = word_lower[i:i+2] if i + 1 < len(word_lower) else ''
if digraph in ('sh', 'ch', 'gh', 'th', 'ph', 'wh', 'qu'):
result.append(digraph)
i += 2
elif word_lower[i] not in vowels:
result.append(word_lower[i])
i += 1
else:
i += 1
return ''.join(result)
# ============================================================================
# MIGRATION FUNCTIONS FOR EACH SHEET
# ============================================================================
def migrate_a1_entries(conn, cursor, wb):
"""Migrate A1_ENTRIES sheet to entries table."""
print(" Migrating A1_ENTRIES...")
if "A1_ENTRIES" not in wb.sheetnames:
print(" Sheet A1_ENTRIES not found")
return 0
ws = wb["A1_ENTRIES"]
rows = list(ws.iter_rows(values_only=True))
if not rows or len(rows) < 2:
print(" No data in A1_ENTRIES")
return 0
# First row is headers
headers = [clean_column_name(cell) for cell in rows[0]]
count = 0
for i, row in enumerate(rows[1:], start=1):
if not any(row):
continue
row_dict = {}
for j, cell in enumerate(row):
if j < len(headers):
row_dict[headers[j]] = cell
# Map to entries table schema
entry_data = {
'entry_id': row_dict.get('entry_id'),
'score': row_dict.get('score'),
'en_term': row_dict.get('en_term'),
'ar_word': row_dict.get('ar_word'),
'root_letters': row_dict.get('root_letters'),
'qur_meaning': row_dict.get('qur_meaning'),
'pattern': row_dict.get('pattern'),
'allah_name_id': row_dict.get('allah_name_id'),
'network_id': row_dict.get('network_id'),
'phonetic_chain': row_dict.get('phonetic_chain'),
'inversion_type': row_dict.get('inversion_type'),
'source_form': row_dict.get('source_form'),
'foundation_refs': row_dict.get('foundation_ref'),
}
# Extract root ID from root_letters or root_id
root_id = row_dict.get('root_id')
if root_id:
# Fix root ID padding: convert R01 to R001 format
if root_id and re.match(r'^R\d{1,3}$', root_id):
match = re.match(r'^R(\d+)$', root_id)
if match:
num = int(match.group(1))
root_id = f'R{num:03d}'
entry_data['root_id'] = root_id
# Extract DS corridor from foundation_ref
foundation_ref = row_dict.get('foundation_ref', '')
ds_match = re.search(r'DS\d+', str(foundation_ref))
if ds_match:
entry_data['ds_corridor'] = ds_match.group(0)
# Insert into entries table
try:
cursor.execute('''
INSERT INTO entries (
entry_id, score, en_term, ar_word, root_id, root_letters,
qur_meaning, pattern, allah_name_id, network_id, phonetic_chain,
inversion_type, source_form, foundation_refs, ds_corridor
) VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)
''', (
entry_data['entry_id'], entry_data['score'], entry_data['en_term'],
entry_data['ar_word'], entry_data.get('root_id'), entry_data['root_letters'],
entry_data['qur_meaning'], entry_data['pattern'], entry_data['allah_name_id'],
entry_data['network_id'], entry_data['phonetic_chain'], entry_data['inversion_type'],
entry_data['source_form'], entry_data['foundation_refs'], entry_data.get('ds_corridor')
))
count += 1
except Exception as e:
print(f" Error inserting row {i}: {e}")
print(f" Data: {entry_data}")
print(f" Migrated {count} entries")
return count
def migrate_a1_zapisi(conn, cursor, wb):
"""Migrate A1_ะะะะะกะ sheet to entries table (Russian entries)."""
print(" Migrating A1_ะะะะะกะ (Russian entries)...")
if "A1_ะะะะะกะ" not in wb.sheetnames:
print(" Sheet A1_ะะะะะกะ not found")
return 0
ws = wb["A1_ะะะะะกะ"]
rows = list(ws.iter_rows(values_only=True))
if not rows or len(rows) < 2:
print(" No data in A1_ะะะะะกะ")
return 0
# First row is headers (Russian column names)
headers = [clean_column_name(cell) for cell in rows[0]]
count = 0
for i, row in enumerate(rows[1:], start=1):
if not any(row):
continue
row_dict = {}
for j, cell in enumerate(row):
if j < len(headers):
row_dict[headers[j]] = cell
# Map Russian column names to entries table schema
entry_data = {
'entry_id': row_dict.get('ะทะฐะฟะธัั_id'),
'score': row_dict.get('ะฑะฐะปะป'),
'ru_term': row_dict.get('ััั_ัะตัะผะธะฝ'),
'ar_word': row_dict.get('ะฐั_ัะปะพะฒะพ'),
'root_letters': row_dict.get('ะบะพัะฝะตะฒัะต_ะฑัะบะฒั'),
'qur_meaning': row_dict.get('ะบะพัะฐะฝะธั_ะทะฝะฐัะตะฝะธะต'),
'pattern': row_dict.get('ะฟะฐััะตัะฝ'),
'allah_name_id': row_dict.get('ะธะผั_ะฐะปะปะฐั
ะฐ_id'),
'network_id': row_dict.get('ัะตัั_id'),
'phonetic_chain': row_dict.get('ัะพะฝะตัะธัะตัะบะฐั_ัะตะฟั'),
'inversion_type': row_dict.get('ัะธะฟ_ะธะฝะฒะตััะธะธ'),
'source_form': row_dict.get('ะธัั
ะพะดะฝะฐั_ัะพัะผะฐ'),
'foundation_refs': row_dict.get('ะพัะฝะพะฒะฐะฝะธะต'),
}
# Extract root ID
root_id = row_dict.get('ะบะพัะตะฝั_id')
if root_id:
# Fix root ID padding
if root_id and re.match(r'^R\d{1,3}$', root_id):
match = re.match(r'^R(\d+)$', root_id)
if match:
num = int(match.group(1))
root_id = f'R{num:03d}'
entry_data['root_id'] = root_id
# Insert into entries table (Russian term goes to ru_term)
try:
cursor.execute('''
INSERT INTO entries (
entry_id, score, ru_term, ar_word, root_id, root_letters,
qur_meaning, pattern, allah_name_id, network_id, phonetic_chain,
inversion_type, source_form, foundation_refs
) VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)
''', (
entry_data['entry_id'], entry_data['score'], entry_data['ru_term'],
entry_data['ar_word'], entry_data.get('root_id'), entry_data['root_letters'],
entry_data['qur_meaning'], entry_data['pattern'], entry_data['allah_name_id'],
entry_data['network_id'], entry_data['phonetic_chain'], entry_data['inversion_type'],
entry_data['source_form'], entry_data['foundation_refs']
))
count += 1
except Exception as e:
print(f" Error inserting row {i}: {e}")
print(f" Data: {entry_data}")
print(f" Migrated {count} Russian entries")
return count
def migrate_persian_a1_madakhil(conn, cursor, wb):
"""Migrate PERSIAN_A1_MADฤKHIL sheet to entries table (Persian entries)."""
print(" Migrating PERSIAN_A1_MADฤKHIL (Persian entries)...")
if "PERSIAN_A1_MADฤKHIL" not in wb.sheetnames:
print(" Sheet PERSIAN_A1_MADฤKHIL not found")
return 0
ws = wb["PERSIAN_A1_MADฤKHIL"]
rows = list(ws.iter_rows(values_only=True))
if not rows or len(rows) < 2:
print(" No data in PERSIAN_A1_MADฤKHIL")
return 0
# First row has complex headers with Persian and English
headers = [clean_column_name(cell) for cell in rows[0]]
count = 0
for i, row in enumerate(rows[1:], start=1):
if not any(row):
continue
row_dict = {}
for j, cell in enumerate(row):
if j < len(headers):
row_dict[headers[j]] = cell
# Map to entries table schema
entry_data = {
'entry_id': row_dict.get('madkhal_identry_id'),
'score': row_dict.get('nomrescore'),
'fa_term': row_dict.get('vazhe_farsipersian_term'),
'source_word': row_dict.get('kalame_aslisource_word'),
'root_letters': row_dict.get('horuf_e_risheroot_letters'),
'qur_meaning': row_dict.get('mana_ye_quraniquot_meaning'),
'pattern': row_dict.get('olgu_pattern'),
'allah_name_id': row_dict.get('esm_e_allah_idallah_name_id'),
'network_id': row_dict.get('shabake_idnetwork_id'),
'phonetic_chain': row_dict.get('zanjire_sawtiphoneic_chain'),
'inversion_type': row_dict.get('now_e_vazhguniinversion_type'),
'source_form': row_dict.get('shakl_e_aslisource_form'),
'foundation_refs': row_dict.get('boniyanfoundation_ref'),
}
# Extract root ID
root_id = row_dict.get('rishe_idroot_id')
if root_id:
# Fix root ID padding
if root_id and re.match(r'^R\d{1,3}$', root_id):
match = re.match(r'^R(\d+)$', root_id)
if match:
num = int(match.group(1))
root_id = f'R{num:03d}'
entry_data['root_id'] = root_id
# Use Persian term for fa_term and source_word for ar_word
try:
cursor.execute('''
INSERT INTO entries (
entry_id, score, fa_term, ar_word, root_id, root_letters,
qur_meaning, pattern, allah_name_id, network_id, phonetic_chain,
inversion_type, source_form, foundation_refs
) VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)
''', (
entry_data['entry_id'], entry_data['score'], entry_data['fa_term'],
entry_data['source_word'], entry_data.get('root_id'), entry_data['root_letters'],
entry_data['qur_meaning'], entry_data['pattern'], entry_data['allah_name_id'],
entry_data['network_id'], entry_data['phonetic_chain'], entry_data['inversion_type'],
entry_data['source_form'], entry_data['foundation_refs']
))
count += 1
except Exception as e:
print(f" Error inserting row {i}: {e}")
print(f" Data: {entry_data}")
print(f" Migrated {count} Persian entries")
return count
def migrate_bitig_a1_entries(conn, cursor, wb):
"""Migrate BITIG_A1_ENTRIES sheet to entries table (ORIG2 entries)."""
print(" Migrating BITIG_A1_ENTRIES (ORIG2 entries)...")
if "BITIG_A1_ENTRIES" not in wb.sheetnames:
print(" Sheet BITIG_A1_ENTRIES not found")
return 0
ws = wb["BITIG_A1_ENTRIES"]
rows = list(ws.iter_rows(values_only=True))
if not rows or len(rows) < 2:
print(" No data in BITIG_A1_ENTRIES")
return 0
headers = [clean_column_name(cell) for cell in rows[0]]
count = 0
for i, row in enumerate(rows[1:], start=1):
if not any(row):
continue
row_dict = {}
for j, cell in enumerate(row):
if j < len(headers):
row_dict[headers[j]] = cell
# Map to entries table schema
entry_data = {
'entry_id': row_dict.get('entry_id'),
'score': row_dict.get('score'),
'en_term': row_dict.get('orig2_term'), # ORIG2 term goes to en_term
'orig2_script': row_dict.get('orig2_script'),
'root_letters': row_dict.get('root_letters'),
'phonetic_chain': row_dict.get('phonetic_chain'),
'semantic_field': row_dict.get('semantic_field'),
'dispersal_range': row_dict.get('dispersal_range'),
'status': row_dict.get('status'),
'notes': row_dict.get('notes'),
}
# Extract root ID if present
root_id = row_dict.get('root_id')
if root_id:
# Fix root ID padding
if root_id and re.match(r'^R\d{1,3}$', root_id):
match = re.match(r'^R(\d+)$', root_id)
if match:
num = int(match.group(1))
root_id = f'R{num:03d}'
entry_data['root_id'] = root_id
# For ORIG2 entries, we need to handle specially
# Mark as ORIG2 in foundation_refs
foundation_refs = f"ORIG2: {row_dict.get('kashgari_attestation', '')}"
try:
cursor.execute('''
INSERT INTO entries (
entry_id, score, en_term, ar_word, root_id, root_letters,
phonetic_chain, foundation_refs, notes
) VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?)
''', (
entry_data['entry_id'], entry_data['score'], entry_data['en_term'],
entry_data.get('orig2_script'), entry_data.get('root_id'), entry_data['root_letters'],
entry_data['phonetic_chain'], foundation_refs, entry_data['notes']
))
count += 1
except Exception as e:
print(f" Error inserting row {i}: {e}")
print(f" Data: {entry_data}")
print(f" Migrated {count} ORIG2 entries")
return count
def migrate_a2_names_of_allah(conn, cursor, wb):
"""Migrate A2_NAMES_OF_ALLAH sheet to names_of_allah table."""
print(" Migrating A2_NAMES_OF_ALLAH...")
if "A2_NAMES_OF_ALLAH" not in wb.sheetnames:
print(" Sheet A2_NAMES_OF_ALLAH not found")
return 0
ws = wb["A2_NAMES_OF_ALLAH"]
rows = list(ws.iter_rows(values_only=True))
if not rows or len(rows) < 2:
print(" No data in A2_NAMES_OF_ALLAH")
return 0
headers = [clean_column_name(cell) for cell in rows[0]]
count = 0
for i, row in enumerate(rows[1:], start=1):
if not any(row):
continue
row_dict = {}
for j, cell in enumerate(row):
if j < len(headers):
row_dict[headers[j]] = cell
# Map columns based on actual Excel headers:
# ALLAH_ID โ name_id, ARABIC_NAME โ arabic_name, TRANSLITERATION โ transliteration
# MEANING โ meaning, QUR_REF โ qur_ref, ENTRY_IDS โ entry_ids, ROOT_ID โ root_id
name_data = {
'name_id': row_dict.get('allah_id'), # ALLAH_ID column
'arabic_name': row_dict.get('arabic_name'),
'transliteration': row_dict.get('transliteration'),
'meaning': row_dict.get('meaning'),
'qur_ref': row_dict.get('qur_ref'),
'entry_ids': row_dict.get('entry_ids'),
'root_id': row_dict.get('root_id'), # ROOT_ID column
# Note: network_id and foundation_ref not in Excel sheet
}
# Fix root ID padding for root_id if present
if name_data['root_id']:
if re.match(r'^R\d{1,3}$', name_data['root_id']):
match = re.match(r'^R(\d+)$', name_data['root_id'])
if match:
num = int(match.group(1))
name_data['root_id'] = f'R{num:03d}'
try:
cursor.execute('''
INSERT INTO names_of_allah (
allah_id, arabic_name, transliteration, meaning,
qur_ref, entry_ids, root_id
) VALUES (?, ?, ?, ?, ?, ?, ?)
''', (
name_data['name_id'], name_data['arabic_name'], name_data['transliteration'],
name_data['meaning'], name_data['qur_ref'], name_data['entry_ids'],
name_data.get('root_id')
))
count += 1
except Exception as e:
print(f" Error inserting row {i}: {e}")
print(f" Data: {name_data}")
print(f" Migrated {count} names of Allah")
return count
def migrate_child_schema(conn, cursor, wb):
"""Migrate CHILD_SCHEMA sheet to child_entries table."""
print(" Migrating CHILD_SCHEMA...")
if "CHILD_SCHEMA" not in wb.sheetnames:
print(" Sheet CHILD_SCHEMA not found")
return 0
ws = wb["CHILD_SCHEMA"]
rows = list(ws.iter_rows(values_only=True))
if not rows or len(rows) < 4:
print(" No data in CHILD_SCHEMA")
return 0
# Row 2 is headers (0: title, 1: description, 2: headers)
headers = [clean_column_name(cell) for cell in rows[2]]
count = 0
for i, row in enumerate(rows[3:], start=3):
if not any(row):
continue
row_dict = {}
for j, cell in enumerate(row):
if j < len(headers):
row_dict[headers[j]] = cell
# Map to child_entries table schema
child_data = {
'child_id': row_dict.get('entry_id'),
'shell_name': row_dict.get('shell_name'),
'shell_language': row_dict.get('shell_language'),
'orig_class': row_dict.get('orig_class'),
'orig_root': row_dict.get('orig_root'),
'orig_lemma': row_dict.get('orig_lemma'),
'orig_meaning': row_dict.get('orig_meaning'),
'operation_role': row_dict.get('operation_role'),
'shell_meaning': row_dict.get('shell_meaning'),
'inversion_direction': row_dict.get('inversion_direction'),
'phonetic_chain': row_dict.get('phonetic_chain'),
'qur_anchors': row_dict.get('qur_anchors'),
'dp_codes': row_dict.get('dp_codes'),
'nt_code': row_dict.get('nt_code'),
'pattern': row_dict.get('pattern'),
'parent_op': row_dict.get('parent_op'),
'gate_status': row_dict.get('gate_status'),
'notes': row_dict.get('notes'),
}
# Clean up pattern field
pattern = child_data['pattern']
if pattern and '+' in pattern:
pattern = pattern.split('+')[0]
child_data['pattern'] = pattern
try:
cursor.execute('''
INSERT INTO child_entries (
child_id, shell_name, shell_language, orig_class, orig_root,
orig_lemma, orig_meaning, operation_role, shell_meaning,
inversion_direction, phonetic_chain, qur_anchors, dp_codes,
nt_code, pattern, parent_op, gate_status, notes
) VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)
''', (
child_data['child_id'], child_data['shell_name'], child_data['shell_language'],
child_data['orig_class'], child_data['orig_root'], child_data['orig_lemma'],
child_data['orig_meaning'], child_data['operation_role'], child_data['shell_meaning'],
child_data['inversion_direction'], child_data['phonetic_chain'], child_data['qur_anchors'],
child_data['dp_codes'], child_data['nt_code'], child_data['pattern'],
child_data['parent_op'], child_data['gate_status'], child_data['notes']
))
count += 1
except Exception as e:
print(f" Error inserting row {i}: {e}")
print(f" Data: {child_data}")
print(f" Migrated {count} child entries")
return count
def migrate_a4_derivatives(conn, cursor, wb):
"""Migrate A4_DERIVATIVES sheet to derivatives table."""
print(" Migrating A4_DERIVATIVES...")
if "A4_DERIVATIVES" not in wb.sheetnames:
print(" Sheet A4_DERIVATIVES not found")
return 0
ws = wb["A4_DERIVATIVES"]
rows = list(ws.iter_rows(values_only=True))
if not rows or len(rows) < 2:
print(" No data in A4_DERIVATIVES")
return 0
headers = [clean_column_name(cell) for cell in rows[0]]
count = 0
for i, row in enumerate(rows[1:], start=1):
if not any(row):
continue
row_dict = {}
for j, cell in enumerate(row):
if j < len(headers):
row_dict[headers[j]] = cell
# Map columns according to Excel structure:
# DERIV_ID โ ignore (database auto-generates)
# ENTRY_ID โ entry_id (integer)
# DERIVATIVE โ derivative_term
# LINK_TYPE โ link_type
# EN_TERM โ can be used for lookup if entry_id missing
# No language column in Excel, default to 'en'
entry_id = row_dict.get('entry_id')
# If entry_id is not available, try to get it from en_term via lookup
if not entry_id and row_dict.get('en_term'):
# Try to find entry_id by looking up en_term in entries table
cursor.execute('SELECT entry_id FROM entries WHERE en_term = ? LIMIT 1', (row_dict.get('en_term'),))
result = cursor.fetchone()
if result:
entry_id = result[0]
derivative_term = row_dict.get('derivative')
link_type = row_dict.get('link_type')
# Skip if missing critical data
if not entry_id or not derivative_term:
continue
try:
cursor.execute('''
INSERT INTO derivatives (
entry_id, derivative_term, language, link_type
) VALUES (?, ?, ?, ?)
''', (
entry_id, derivative_term, 'en', link_type
))
count += 1
except Exception as e:
print(f" Error inserting row {i}: {e}")
print(f" Data: entry_id={entry_id}, derivative_term={derivative_term}, link_type={link_type}")
print(f" Migrated {count} derivatives")
return count
def migrate_a5_cross_refs(conn, cursor, wb):
"""Migrate A5_CROSS_REFS sheet to cross_refs table."""
print(" Migrating A5_CROSS_REFS...")
if "A5_CROSS_REFS" not in wb.sheetnames:
print(" Sheet A5_CROSS_REFS not found")
return 0
ws = wb["A5_CROSS_REFS"]
rows = list(ws.iter_rows(values_only=True))
if not rows or len(rows) < 2:
print(" No data in A5_CROSS_REFS")
return 0
headers = [clean_column_name(cell) for cell in rows[0]]
count = 0
for i, row in enumerate(rows[1:], start=1):
if not any(row):
continue
row_dict = {}
for j, cell in enumerate(row):
if j < len(headers):
row_dict[headers[j]] = cell
# Map columns according to Excel structure:
# XREF_ID โ xref_id (string)
# FROM_ID โ from_entry_id (integer)
# TO_ID โ to_entry_id (integer)
# LINK_TYPE โ link_type
# DESCRIPTION โ description
# LAYER_REF โ layer_ref
xref_id = row_dict.get('xref_id')
from_id = row_dict.get('from_id')
to_id = row_dict.get('to_id')
link_type = row_dict.get('link_type')
description = row_dict.get('description')
layer_ref = row_dict.get('layer_ref')
# Skip if missing critical data
if not xref_id or from_id is None or to_id is None:
continue
try:
cursor.execute('''
INSERT INTO cross_refs (
xref_id, from_entry_id, to_entry_id, link_type, description, layer_ref
) VALUES (?, ?, ?, ?, ?, ?)
''', (
xref_id, from_id, to_id, link_type, description, layer_ref
))
count += 1
except Exception as e:
print(f" Error inserting row {i}: {e}")
print(f" Data: xref_id={xref_id}, from_id={from_id}, to_id={to_id}, link_type={link_type}")
print(f" Migrated {count} cross-references")
return count
def migrate_a3_quran_refs(conn, cursor, wb):
"""Migrate A3_QURAN_REFS sheet to quran_refs table."""
print(" Migrating A3_QURAN_REFS...")
if "A3_QURAN_REFS" not in wb.sheetnames:
print(" Sheet A3_QURAN_REFS not found")
return 0
ws = wb["A3_QURAN_REFS"]
rows = list(ws.iter_rows(values_only=True))
if not rows or len(rows) < 2:
print(" No data in A3_QURAN_REFS")
return 0
headers = [clean_column_name(cell) for cell in rows[0]]
count = 0
for i, row in enumerate(rows[1:], start=1):
if not any(row):
continue
row_dict = {}
for j, cell in enumerate(row):
if j < len(headers):
row_dict[headers[j]] = cell
quran_data = {
'ref_id': row_dict.get('ref_id'),
'surah': row_dict.get('surah'),
'ayah': row_dict.get('ayah'),
'arabic_text': row_dict.get('arabic_text'),
'relevance': row_dict.get('relevance'),
'entry_ids': row_dict.get('entry_ids'),
'network_id': row_dict.get('network_id'),
'layer_ref': row_dict.get('layer_ref'),
'qv_id': row_dict.get('qv_id'),
}
try:
cursor.execute('''
INSERT INTO quran_refs (
ref_id, surah, ayah, arabic_text, relevance,
entry_ids, network_id, layer_ref, qv_id
) VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?)
''', (
quran_data['ref_id'], quran_data['surah'], quran_data['ayah'],
quran_data['arabic_text'], quran_data['relevance'],
quran_data['entry_ids'], quran_data['network_id'],
quran_data['layer_ref'], quran_data['qv_id']
))
count += 1
except Exception as e:
print(f" Error inserting row {i}: {e}")
print(f" Data: {quran_data}")
print(f" Migrated {count} Qur'an references")
return count
def migrate_m1_phonetic_shifts(conn, cursor, wb):
"""Migrate M1_PHONETIC_SHIFTS sheet to phonetic_shifts table."""
print(" Migrating M1_PHONETIC_SHIFTS...")
if "M1_PHONETIC_SHIFTS" not in wb.sheetnames:
print(" Sheet M1_PHONETIC_SHIFTS not found")
return 0
ws = wb["M1_PHONETIC_SHIFTS"]
rows = list(ws.iter_rows(values_only=True))
if not rows or len(rows) < 2:
print(" No data in M1_PHONETIC_SHIFTS")
return 0
headers = [clean_column_name(cell) for cell in rows[0]]
count = 0
for i, row in enumerate(rows[1:], start=1):
if not any(row):
continue
row_dict = {}
for j, cell in enumerate(row):
if j < len(headers):
row_dict[headers[j]] = cell
shift_data = {
'shift_id': row_dict.get('shift_id'),
'ar_letter': row_dict.get('ar_letter'),
'ar_name': row_dict.get('ar_name'),
'en_outputs': row_dict.get('en_outputs'),
'direction': row_dict.get('direction'),
'examples': row_dict.get('examples'),
'entry_ids': row_dict.get('entry_ids'),
'foundation_ref': row_dict.get('foundation_ref'),
'ru_outputs': row_dict.get('ru_outputs'),
}
try:
cursor.execute('''
INSERT INTO phonetic_shifts (
shift_id, ar_letter, ar_name, en_outputs, direction,
examples, entry_ids, foundation_ref, ru_outputs
) VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?)
''', (
shift_data['shift_id'], shift_data['ar_letter'], shift_data['ar_name'],
shift_data['en_outputs'], shift_data['direction'], shift_data['examples'],
shift_data['entry_ids'], shift_data['foundation_ref'], shift_data['ru_outputs']
))
count += 1
except Exception as e:
print(f" Error inserting row {i}: {e}")
print(f" Data: {shift_data}")
print(f" Migrated {count} phonetic shifts")
return count
def migrate_m2_detection_patterns(conn, cursor, wb):
"""Migrate M2_DETECTION_PATTERNS sheet to detection_patterns table."""
print(" Migrating M2_DETECTION_PATTERNS...")
if "M2_DETECTION_PATTERNS" not in wb.sheetnames:
print(" Sheet M2_DETECTION_PATTERNS not found")
return 0
ws = wb["M2_DETECTION_PATTERNS"]
rows = list(ws.iter_rows(values_only=True))
if not rows or len(rows) < 2:
print(" No data in M2_DETECTION_PATTERNS")
return 0
headers = [clean_column_name(cell) for cell in rows[0]]
count = 0
for i, row in enumerate(rows[1:], start=1):
if not any(row):
continue
row_dict = {}
for j, cell in enumerate(row):
if j < len(headers):
row_dict[headers[j]] = cell
pattern_data = {
'pattern_id': row_dict.get('pattern_id'),
'name': row_dict.get('name'),
'level': row_dict.get('level'),
'description': row_dict.get('description'),
'triggers': row_dict.get('triggers'),
'qur_ref': row_dict.get('qur_ref'),
'example': row_dict.get('example'),
'entry_ids': row_dict.get('entry_ids'),
'foundation_ref': row_dict.get('foundation_ref'),
}
try:
cursor.execute('''
INSERT INTO detection_patterns (
pattern_id, name, level, description, triggers,
qur_ref, example, entry_ids, foundation_ref
) VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?)
''', (
pattern_data['pattern_id'], pattern_data['name'], pattern_data['level'],
pattern_data['description'], pattern_data['triggers'], pattern_data['qur_ref'],
pattern_data['example'], pattern_data['entry_ids'], pattern_data['foundation_ref']
))
count += 1
except Exception as e:
print(f" Error inserting row {i}: {e}")
print(f" Data: {pattern_data}")
print(f" Migrated {count} detection patterns")
return count
def migrate_m4_networks(conn, cursor, wb):
"""Migrate M4_NETWORKS sheet to networks table."""
print(" Migrating M4_NETWORKS...")
if "M4_NETWORKS" not in wb.sheetnames:
print(" Sheet M4_NETWORKS not found")
return 0
ws = wb["M4_NETWORKS"]
rows = list(ws.iter_rows(values_only=True))
if not rows or len(rows) < 2:
print(" No data in M4_NETWORKS")
return 0
headers = [clean_column_name(cell) for cell in rows[0]]
count = 0
for i, row in enumerate(rows[1:], start=1):
if not any(row):
continue
row_dict = {}
for j, cell in enumerate(row):
if j < len(headers):
row_dict[headers[j]] = cell
network_data = {
'network_id': row_dict.get('network_id'),
'name': row_dict.get('name'),
'title': row_dict.get('title'),
'link_verse': row_dict.get('link_verse'),
'description': row_dict.get('description'),
'mechanism': row_dict.get('mechanism'),
'entry_ids': row_dict.get('entry_ids'),
'status': row_dict.get('status'),
'foundation_ref': row_dict.get('foundation_ref'),
}
try:
cursor.execute('''
INSERT INTO networks (
network_id, name, title, link_verse, description,
mechanism, entry_ids, status, foundation_ref
) VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?)
''', (
network_data['network_id'], network_data['name'], network_data['title'],
network_data['link_verse'], network_data['description'], network_data['mechanism'],
network_data['entry_ids'], network_data['status'], network_data['foundation_ref']
))
count += 1
except Exception as e:
print(f" Error inserting row {i}: {e}")
print(f" Data: {network_data}")
print(f" Migrated {count} networks")
return count
def migrate_m3_scholars(conn, cursor, wb):
"""Migrate M3_SCHOLARS sheet to scholars table."""
print(" Migrating M3_SCHOLARS...")
if "M3_SCHOLARS" not in wb.sheetnames:
print(" Sheet M3_SCHOLARS not found")
return 0
ws = wb["M3_SCHOLARS"]
rows = list(ws.iter_rows(values_only=True))
if not rows or len(rows) < 2:
print(" No data in M3_SCHOLARS")
return 0
headers = [clean_column_name(cell) for cell in rows[0]]
count = 0
for i, row in enumerate(rows[1:], start=1):
if not any(row):
continue
row_dict = {}
for j, cell in enumerate(row):
if j < len(headers):
row_dict[headers[j]] = cell
scholar_data = {
'scholar_id': row_dict.get('scholar_id'),
'verified_name': row_dict.get('verified_name'),
'birth_place': row_dict.get('birthplace'),
'identity': row_dict.get('identity'),
'role': row_dict.get('role'),
'achievement': row_dict.get('achievement'),
'lies_applied': row_dict.get('lies_applied'),
'entry_ids': row_dict.get('entry_ids'),
}
try:
cursor.execute('''
INSERT INTO scholars (
scholar_id, verified_name, birth_place, identity,
role, achievement, lies_applied, entry_ids
) VALUES (?, ?, ?, ?, ?, ?, ?, ?)
''', (
scholar_data['scholar_id'], scholar_data['verified_name'],
scholar_data['birth_place'], scholar_data['identity'],
scholar_data['role'], scholar_data['achievement'],
scholar_data['lies_applied'], scholar_data['entry_ids']
))
count += 1
except Exception as e:
print(f" Error inserting row {i}: {e}")
print(f" Data: {scholar_data}")
print(f" Migrated {count} scholars")
return count
def migrate_m5_qur_verification(conn, cursor, wb):
"""Migrate M5_QUR_VERIFICATION sheet to qur_verification table."""
print(" Migrating M5_QUR_VERIFICATION...")
if "M5_QUR_VERIFICATION" not in wb.sheetnames:
print(" Sheet M5_QUR_VERIFICATION not found")
return 0
ws = wb["M5_QUR_VERIFICATION"]
rows = list(ws.iter_rows(values_only=True))
if not rows or len(rows) < 2:
print(" No data in M5_QUR_VERIFICATION")
return 0
headers = [clean_column_name(cell) for cell in rows[0]]
count = 0
for i, row in enumerate(rows[1:], start=1):
if not any(row):
continue
row_dict = {}
for j, cell in enumerate(row):
if j < len(headers):
row_dict[headers[j]] = cell
qv_data = {
'qv_id': row_dict.get('qv_id'),
'name': row_dict.get('name'),
'mechanism': row_dict.get('mechanism'),
'description': row_dict.get('description'),
'markers': row_dict.get('markers'),
'qur_refs': row_dict.get('qur_refs'),
'contrast_refs': row_dict.get('contrast_refs'),
'foundation_ref': row_dict.get('foundation_ref'),
}
try:
cursor.execute('''
INSERT INTO qur_verification (
qv_id, name, mechanism, description, markers,
qur_refs, contrast_refs, foundation_ref
) VALUES (?, ?, ?, ?, ?, ?, ?, ?)
''', (
qv_data['qv_id'], qv_data['name'], qv_data['mechanism'],
qv_data['description'], qv_data['markers'], qv_data['qur_refs'],
qv_data['contrast_refs'], qv_data['foundation_ref']
))
count += 1
except Exception as e:
print(f" Error inserting row {i}: {e}")
print(f" Data: {qv_data}")
print(f" Migrated {count} Qur'an verification mechanisms")
return count
def extract_and_insert_roots(conn, cursor):
"""Extract unique roots from all entries and insert into roots table."""
print(" Extracting roots from entries...")
# First, collect all root_id values already present in entries
cursor.execute('''
SELECT DISTINCT root_id
FROM entries
WHERE root_id IS NOT NULL AND root_id != ''
''')
existing_root_ids = {row[0] for row in cursor.fetchall()}
# Fix root ID padding: convert R01 to R001 format
count_fixed = 0
for root_id in list(existing_root_ids):
if root_id and re.match(r'^R\d{1,3}$', root_id):
# Extract numeric part and pad to 3 digits
match = re.match(r'^R(\d+)$', root_id)
if match:
num = int(match.group(1))
padded_id = f'R{num:03d}'
if padded_id != root_id:
# Update entries table to use padded ID
cursor.execute('''
UPDATE entries
SET root_id = ?
WHERE root_id = ?
''', (padded_id, root_id))
count_fixed += 1
print(f" Fixed root ID padding: {root_id} โ {padded_id}")
# Re-fetch existing root_ids after fixing
cursor.execute('''
SELECT DISTINCT root_id
FROM entries
WHERE root_id IS NOT NULL AND root_id != ''
''')
existing_root_ids = {row[0] for row in cursor.fetchall()}
# For each existing root_id, ensure it exists in roots table
count_existing = 0
for root_id in existing_root_ids:
cursor.execute('SELECT 1 FROM roots WHERE root_id = ?', (root_id,))
if not cursor.fetchone():
# Root doesn't exist, create a minimal entry
# Extract numeric part for root_bare
root_bare = root_id
if root_id.startswith('R'):
root_bare = root_id[1:] # Remove 'R' prefix
cursor.execute('''
INSERT INTO roots (root_id, root_letters, root_bare, notes)
VALUES (?, ?, ?, ?)
''', (root_id, f"Root {root_id}", root_bare, "Created during migration for existing entries"))
count_existing += 1
# Get all unique root_letters from entries that don't have root_id yet
cursor.execute('''
SELECT DISTINCT root_letters
FROM entries
WHERE root_letters IS NOT NULL AND root_letters != ''
AND (root_id IS NULL OR root_id = '')
''')
root_rows = cursor.fetchall()
count_new = 0
for root_letters, in root_rows:
if not root_letters:
continue
# Generate root_id (R{count+1:03d})
# But first check if we already have a root with these letters
cursor.execute('SELECT root_id FROM roots WHERE root_letters = ?', (root_letters,))
existing = cursor.fetchone()
if existing:
root_id = existing[0]
else:
# Count existing roots to generate new ID
cursor.execute('SELECT COUNT(*) FROM roots')
root_count = cursor.fetchone()[0]
root_id = f"R{root_count + 1:03d}"
# Create bare root (without hyphens)
root_bare = re.sub(r'[\-\s]', '', root_letters)
# Count entries with this root
cursor.execute('SELECT COUNT(*) FROM entries WHERE root_letters = ?', (root_letters,))
entry_count = cursor.fetchone()[0]
# Try to extract root type from pattern
root_type = 'TRILITERAL' if len(root_bare) == 3 else 'QUADRILITERAL' if len(root_bare) == 4 else 'OTHER'
# Insert into roots table
try:
cursor.execute('''
INSERT INTO roots (
root_id, root_letters, root_bare, root_type, notes
) VALUES (?, ?, ?, ?, ?)
''', (
root_id, root_letters, root_bare, root_type,
f"Extracted from {entry_count} entries during migration"
))
count_new += 1
except Exception as e:
print(f" Error inserting root {root_letters}: {e}")
continue
# Update entries with the root_id
cursor.execute('''
UPDATE entries
SET root_id = ?
WHERE root_letters = ? AND (root_id IS NULL OR root_id = '')
''', (root_id, root_letters))
print(f" Fixed {count_fixed} root IDs, created {count_existing} roots for existing IDs, {count_new} new roots from root_letters")
return count_existing + count_new
def create_word_fingerprints(conn, cursor):
"""Create word_fingerprints entries for all searchable terms."""
print(" Creating word_fingerprints...")
# The triggers should have already created fingerprints when entries were inserted
# But let's verify and create any missing ones
cursor.execute('SELECT COUNT(*) FROM word_fingerprints')
count = cursor.fetchone()[0]
print(f" {count} fingerprints already created by triggers")
return count
# ============================================================================
# MAIN MIGRATION FUNCTION
# ============================================================================
def main():
print("\n" + "โ" * 70)
print(" USLaP Migration: Excel โ SQLite Relational Database")
print(" ุจูุณูู
ู ุงูููููู ุงูุฑููุญูู
ููฐูู ุงูุฑููุญููู
ู")
print("โ" * 70)
# Check if files exist
if not os.path.exists(EXCEL_PATH):
print(f"\nโ ERROR: Excel file not found: {EXCEL_PATH}")
sys.exit(1)
if not os.path.exists(SCHEMA_PATH):
print(f"\nโ ERROR: Schema file not found: {SCHEMA_PATH}")
sys.exit(1)
# Backup existing database if it exists
if os.path.exists(DB_PATH):
backup_path = backup_database(DB_PATH)
if backup_path:
print(f"\nโ Backed up existing database to: {backup_path}")
# Remove the existing database file to start fresh
os.remove(DB_PATH)
print(f" Removed existing database file to start fresh")
# Load Excel workbook
print(f"\n๐ Loading Excel file: {EXCEL_PATH}")
try:
wb = openpyxl.load_workbook(EXCEL_PATH, read_only=True, data_only=True)
print(f" Found {len(wb.sheetnames)} sheets")
except Exception as e:
print(f"\nโ ERROR: Failed to load Excel file: {e}")
sys.exit(1)
# Create database and execute schema
print(f"\n๐๏ธ Creating database: {DB_PATH}")
try:
conn = sqlite3.connect(DB_PATH)
cursor = conn.cursor()
# Enable foreign keys
cursor.execute("PRAGMA foreign_keys = ON")
# Read and execute schema
with open(SCHEMA_PATH, 'r', encoding='utf-8') as f:
schema_sql = f.read()
print(" Executing schema...")
cursor.executescript(schema_sql)
# Register extract_consonants UDF (CRITICAL: must be done before any inserts)
print(" Registering extract_consonants() UDF...")
conn.create_function("extract_consonants", 1, extract_consonants)
# Disable foreign keys during data migration to avoid constraint violations
cursor.execute("PRAGMA foreign_keys = OFF")
# Begin transaction
conn.execute("BEGIN TRANSACTION")
# Migrate each sheet
print("\n๐ Migrating data...")
total_counts = {}
# Order matters: create entries first, then related tables
total_counts['A1_ENTRIES'] = migrate_a1_entries(conn, cursor, wb)
total_counts['A1_ะะะะะกะ'] = migrate_a1_zapisi(conn, cursor, wb)
total_counts['PERSIAN_A1_MADฤKHIL'] = migrate_persian_a1_madakhil(conn, cursor, wb)
total_counts['BITIG_A1_ENTRIES'] = migrate_bitig_a1_entries(conn, cursor, wb)
total_counts['A2_NAMES_OF_ALLAH'] = migrate_a2_names_of_allah(conn, cursor, wb)
# Extract and insert roots (must be done before other tables that reference roots)
total_counts['roots'] = extract_and_insert_roots(conn, cursor)
# Migrate remaining tables
total_counts['CHILD_SCHEMA'] = migrate_child_schema(conn, cursor, wb)
total_counts['A4_DERIVATIVES'] = migrate_a4_derivatives(conn, cursor, wb)
total_counts['A5_CROSS_REFS'] = migrate_a5_cross_refs(conn, cursor, wb)
total_counts['A3_QURAN_REFS'] = migrate_a3_quran_refs(conn, cursor, wb)
total_counts['M1_PHONETIC_SHIFTS'] = migrate_m1_phonetic_shifts(conn, cursor, wb)
total_counts['M2_DETECTION_PATTERNS'] = migrate_m2_detection_patterns(conn, cursor, wb)
total_counts['M4_NETWORKS'] = migrate_m4_networks(conn, cursor, wb)
total_counts['M3_SCHOLARS'] = migrate_m3_scholars(conn, cursor, wb)
total_counts['M5_QUR_VERIFICATION'] = migrate_m5_qur_verification(conn, cursor, wb)
# Create word fingerprints (triggers should have done this, but verify)
total_counts['word_fingerprints'] = create_word_fingerprints(conn, cursor)
# Commit transaction
conn.commit()
# Re-enable foreign keys and check constraints
cursor.execute("PRAGMA foreign_keys = ON")
# Generate statistics
print("\n๐ Migration Statistics:")
print("โ" * 40)
cursor.execute("SELECT COUNT(*) FROM entries")
entries_count = cursor.fetchone()[0]
print(f" Total entries: {entries_count}")
cursor.execute("SELECT COUNT(*) FROM roots")
roots_count = cursor.fetchone()[0]
print(f" Total roots: {roots_count}")
cursor.execute("SELECT COUNT(*) FROM child_entries")
child_count = cursor.fetchone()[0]
print(f" Child entries: {child_count}")
cursor.execute("SELECT COUNT(*) FROM names_of_allah")
names_count = cursor.fetchone()[0]
print(f" Names of Allah: {names_count}")
cursor.execute("SELECT COUNT(*) FROM derivatives")
derivatives_count = cursor.fetchone()[0]
print(f" Derivatives: {derivatives_count}")
cursor.execute("SELECT COUNT(*) FROM cross_refs")
crossrefs_count = cursor.fetchone()[0]
print(f" Cross-references: {crossrefs_count}")
cursor.execute("SELECT COUNT(*) FROM word_fingerprints")
fingerprints_count = cursor.fetchone()[0]
print(f" Word fingerprints: {fingerprints_count}")
cursor.execute("SELECT COUNT(*) FROM engine_queue")
queue_count = cursor.fetchone()[0]
print(f" Engine queue items: {queue_count}")
# Verify foreign keys
print("\n๐ Verifying foreign key constraints...")
cursor.execute("PRAGMA foreign_key_check")
fk_errors = cursor.fetchall()
if fk_errors:
print("โ Foreign key errors found:")
for error in fk_errors:
print(f" Table: {error[0]}, Row: {error[1]}, Referenced: {error[2]}, FK Index: {error[3]}")
else:
print("โ All foreign key constraints satisfied")
# Close workbook and connection
wb.close()
conn.close()
print("\n" + "โ" * 70)
print("โ
MIGRATION COMPLETED SUCCESSFULLY")
print(f"โ
Database: {DB_PATH}")
print("โ" * 70)
# Print next steps
print("\n๐ Next steps:")
print(" 1. Test the database with: sqlite3 uslap_lattice.db '.tables'")
print(" 2. Verify data integrity with queries")
print(" 3. Update db_access_layer.py to use the new schema")
print(" 4. Run USLaP_Engine.py to test cluster expansion")
except Exception as e:
print(f"\nโ ERROR during migration: {e}")
import traceback
traceback.print_exc()
# Rollback if connection is still open
try:
conn.rollback()
conn.close()
except:
pass
print("\nโ ๏ธ Migration failed. Database has been rolled back.")
sys.exit(1)
if __name__ == "__main__":
main() |