Zero-Shot Classification
Transformers
Safetensors
qwen3_5
feature-extraction
security
code-review
ai-agents
decision-model
d3
system-one
pre-release
custom_code
Instructions to use stonefish-labs/d3-mini-agentcode with libraries, inference providers, notebooks, and local apps. Follow these links to get started.
- Libraries
- Transformers
How to use stonefish-labs/d3-mini-agentcode with Transformers:
# Use a pipeline as a high-level helper from transformers import pipeline pipe = pipeline("zero-shot-classification", model="stonefish-labs/d3-mini-agentcode", trust_remote_code=True)# pip install -U transformers accelerate # Load model directly from transformers import AutoProcessor, AutoModel processor = AutoProcessor.from_pretrained("stonefish-labs/d3-mini-agentcode", trust_remote_code=True) model = AutoModel.from_pretrained("stonefish-labs/d3-mini-agentcode", trust_remote_code=True, device_map="auto") - Notebooks
- Google Colab
- Kaggle
File size: 20,691 Bytes
21a9138 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 | """Manifests, configuration, CI workflows, Dockerfiles, Makefiles, .pth files and binary/archive artefacts."""
from __future__ import annotations
import json
import re
from .model import Behaviour, clip
from . import patterns as P
from . import shell
PKG_META = {"url", "homepage", "repository", "bugs", "funding", "email", "author", "license", "$schema", "description",
"name", "version", "main", "module", "types", "typings", "browser", "registry", "type", "web", "docs",
"issues", "source", "changelog", "documentation", "icon", "logo", "image"}
NPM_LIFECYCLE = ("preinstall", "install", "postinstall", "preuninstall", "uninstall", "postuninstall", "prepare",
"prepublish", "prepublishOnly", "prepack", "postpack", "dependencies")
CI_PATH = re.compile(r"(^|/)(\.github/workflows/[^/]+\.ya?ml|\.gitlab-ci\.ya?ml|\.circleci/config\.ya?ml|"
r"azure-pipelines[^/]*\.ya?ml|\.travis\.ya?ml|bitbucket-pipelines\.ya?ml|\.drone\.ya?ml|"
r"\.buildkite/[^/]+\.ya?ml|\.woodpecker[^/]*\.ya?ml|\.github/actions/[^/]+/action\.ya?ml|action\.ya?ml)$")
MAGIC = [(b"\x7fELF", "ELF executable/library"), (b"MZ", "PE (Windows) executable"),
(b"\xcf\xfa\xed\xfe", "Mach-O 64"), (b"\xce\xfa\xed\xfe", "Mach-O"), (b"\xca\xfe\xba\xbe", "Mach-O fat / Java class"),
(b"\x00asm", "WebAssembly"), (b"PK\x03\x04", "zip archive"), (b"\x1f\x8b", "gzip"),
(b"7z\xbc\xaf\x27\x1c", "7z archive"), (b"Rar!", "rar archive"), (b"BZh", "bzip2"), (b"\xfd7zXZ", "xz"),
(b"\x89PNG", "PNG image"), (b"\xff\xd8\xff", "JPEG image"), (b"GIF8", "GIF image"), (b"%PDF", "PDF"),
(b"SQLite format 3", "SQLite database")]
MEDIA = ("PNG image", "JPEG image", "GIF image", "PDF")
MEDIA_EXT = (".png", ".jpg", ".jpeg", ".gif", ".ico", ".webp", ".bmp", ".woff", ".woff2", ".ttf", ".otf", ".eot",
".mp3", ".mp4", ".wav", ".ogg", ".pdf", ".svgz", ".icns", ".avif")
class Emitter:
def __init__(self, unit, context=""):
self.u, self.ctx, self.out = unit, context, []
self.lines = unit.text.split("\n")
def ev(self, ln):
return self.lines[ln - 1].strip() if 0 < ln <= len(self.lines) else ""
def add(self, kind, ln, operand, detail="", source="manifest", ctx=None, force=False):
if force or self.u.in_focus(ln):
self.out.append(Behaviour(kind, self.u.path, ln, clip(operand, 140) or "dynamic", self.ev(ln), detail,
self.ctx if ctx is None else ctx, source))
def sh(self, text, ln, ctx=None, embedded="", emit_spawn=True):
self.out.extend(shell.analyse(text, self.u.path, base_line=ln, in_focus=self.u.in_focus,
context=self.ctx if ctx is None else ctx, embedded=embedded,
emit_spawn=emit_spawn))
def common(self):
for i, l in enumerate(self.lines, 1):
s = l.strip()
if not s or s.startswith(("#", "//", ";")) or not self.u.in_focus(i):
continue
for label in P.secret_hits(s):
self.add("secret_or_credential_path", i, label, source="regex")
for rx, label in P.TLS_OFF:
if rx.search(s):
self.add("security_setting_change", i, label, "TLS verification off", source="regex")
for op, det in P.obfuscation(l, "other"):
self.add("obfuscation_markers", i, op, det, source="regex")
def package_json(u, ctx=""):
e = Emitter(u, ctx)
in_scripts = in_deps = in_publish = False
depth_marker = None
for i, l in enumerate(e.lines, 1):
s = l.strip()
m = re.match(r'"(scripts|dependencies|devDependencies|optionalDependencies|peerDependencies|publishConfig|'
r'bundleDependencies|bundledDependencies|overrides|resolutions)"\s*:\s*\{', s)
if m:
in_scripts, in_deps, in_publish = m.group(1) == "scripts", "ependencies" in m.group(1) or m.group(1) in ("overrides", "resolutions"), m.group(1) == "publishConfig"
depth_marker = len(l) - len(l.lstrip())
continue
if s.startswith("}") and depth_marker is not None and len(l) - len(l.lstrip()) <= depth_marker:
in_scripts = in_deps = in_publish = False
depth_marker = None
continue
kv = re.match(r'"([^"]+)"\s*:\s*"((?:[^"\\]|\\.)*)"', s)
if not kv:
continue
key, val = kv.group(1), kv.group(2).encode().decode("unicode_escape", errors="replace")
diffmode_script = depth_marker is None and u.focus is not None and key in NPM_LIFECYCLE
if in_scripts or diffmode_script:
if key in NPM_LIFECYCLE:
e.add("install_or_startup_hook", i, f"npm {key}: {val}", "npm lifecycle script")
e.sh(val, i, ctx=f"npm {key}", emit_spawn=False)
else:
e.sh(val, i, ctx=f"npm script {key}", emit_spawn=False)
elif in_deps or depth_marker is None and u.focus is not None and key not in PKG_META and \
re.match(r"(@[\w.-]+/)?[\w.-]+$", key) and re.match(r"(https?|git(\+\w+)?|github|gist|file|link):", val):
if re.match(r"(https?://|git(\+\w+)?:|git@|github:|gist:|bitbucket:|gitlab:)", val) or \
re.match(r"^[\w-]+/[\w.-]+(#.*)?$", val):
e.add("network_egress", i, val, f"dependency {key} fetched from URL/git at install")
elif val.startswith(("file:", "link:")):
e.add("file_write", i, val, f"dependency {key} from local path", )
elif in_publish and key == "registry" or key == "registry":
e.add("security_setting_change", i, f"registry {val}", "registry setting")
e.common()
return e.out
def lifecycle_targets(text):
"""package mode: map files run by npm lifecycle scripts -> context label."""
out = {}
try:
scripts = json.loads(text).get("scripts", {}) or {}
except Exception:
return out
for k, v in scripts.items():
if k in NPM_LIFECYCLE and isinstance(v, str):
for m in re.finditer(r"\b(?:node|bun|deno run|python3?|sh|bash|tsx|ts-node)\s+(?:-\S+\s+)*([\w./-]+)", v):
out[m.group(1).removeprefix("./")] = f"npm {k}"
return out
def npmrc_like(u, ctx=""):
e = Emitter(u, ctx)
name = u.path.rsplit("/", 1)[-1]
for i, l in enumerate(e.lines, 1):
s = l.strip()
if not s or s.startswith(("#", ";")):
continue
for rx, label in P.REGISTRY:
m = rx.search(s)
if m:
e.add("security_setting_change", i, f"{label}: {m.group(m.lastindex)}", "registry/index change")
break
if re.search(r"_auth(Token)?\s*=|password\s*[=:]|//[^ ]+:_password", s, re.I):
e.add("secret_or_credential_path", i, f"{name} credential entry", "credential stored in config")
if re.match(r"(ignore-scripts\s*=\s*false|unsafe-perm\s*=\s*true)", s):
e.add("security_setting_change", i, s, "package manager setting")
if name == ".env" or name.startswith(".env.") or name == ".netrc":
e.add("secret_or_credential_path", u.first_focus(), f"{name} file", "credential/env file in change set", force=True)
e.common()
return e.out
def requirements(u, ctx=""):
e = Emitter(u, ctx)
for i, l in enumerate(e.lines, 1):
s = l.split(" #", 1)[0].strip()
if not s or s.startswith("#"):
continue
m = re.match(r"(-i|--index-url|--extra-index-url|--trusted-host|-f|--find-links)[ =]+(\S+)", s)
if m:
e.add("security_setting_change", i, f"pip {m.group(1)} {m.group(2)}", "package index change")
elif re.search(r"(@\s*|^)(https?://|git\+|svn\+|hg\+|file:)", s):
e.add("network_egress", i, s, "dependency fetched from URL at install")
return e.out
def toml_ini(u, ctx=""):
e = Emitter(u, ctx)
name = u.path.rsplit("/", 1)[-1]
section = ""
for i, l in enumerate(e.lines, 1):
s = l.strip()
if s.startswith("["):
section = s
if re.match(r"\[tool\.hatch\.(build\.(targets\.\w+\.)?hooks|metadata\.hooks)", s):
e.add("install_or_startup_hook", i, s, "hatch build/metadata hook")
if re.match(r"\[tool\.setuptools\.cmdclass\]|\[tool\.pdm\.build\]|\[tool\.poetry\.build\]", s):
e.add("install_or_startup_hook", i, s, "build hook configuration")
continue
if not s or s.startswith(("#", ";")):
continue
m = re.match(r"build-backend\s*=\s*['\"]([^'\"]+)", s)
if m:
e.add("install_or_startup_hook", i, f"build-backend {m.group(1)}", "build backend runs at install")
m = re.match(r"(backend-path)\s*=\s*(.+)", s)
if m:
e.add("install_or_startup_hook", i, f"backend-path {m.group(2)}", "in-tree build backend")
for rx, label in P.REGISTRY[3:]:
m = rx.search(s)
if m:
e.add("security_setting_change", i, f"{label}: {m.group(m.lastindex)}", "package index change")
break
if re.search(r"tool\.poetry\.source|tool\.pdm\.source|\[\[tool\.uv\.index", section) and re.match(r"url\s*=", s):
e.add("security_setting_change", i, "index " + s.split("=", 1)[1].strip(), "package index change")
if name in ("Cargo.toml",) and re.search(r"\bbuild\s*=", s):
e.add("install_or_startup_hook", i, s, "cargo build script")
e.common()
return e.out
def _yaml_keys(path):
if ".gitlab-ci" in path:
return r"(script|before_script|after_script)"
if ".travis" in path:
return r"(script|before_install|install|before_script|after_success|after_script|before_deploy)"
if ".circleci" in path or ".drone" in path or ".woodpecker" in path or ".buildkite" in path:
return r"(command|commands|run)"
if "azure-pipelines" in path:
return r"(script|bash|pwsh|powershell|inlineScript)"
if "bitbucket" in path:
return r"(script)"
return r"(run)"
def _yaml_blocks(lines, keys=r"(run)"):
"""Yield (key, start_line, text) for run/script-like values in YAML (block scalars, inline, lists)."""
i = 0
n = len(lines)
while i < n:
l = lines[i]
m = re.match(r"^(\s*)(?:-\s+)?" + keys + r"\s*:\s*(.*)$", l)
if not m:
i += 1
continue
indent, key, val = len(m.group(1)), m.group(2), m.group(3).strip()
if val in ("|", "|-", "|+", ">", ">-", ">+") or val == "":
body, j = [], i + 1
while j < n and (not lines[j].strip() or len(lines[j]) - len(lines[j].lstrip()) > indent):
body.append(lines[j])
j += 1
if val == "":
items = [(k, re.sub(r"^\s*-\s+", "", b)) for k, b in enumerate(body) if re.match(r"^\s*-\s+", b)]
for k, txt in items:
yield key, i + 2 + k, txt.strip().strip("'\"")
else:
ind = min((len(b) - len(b.lstrip()) for b in body if b.strip()), default=0)
yield key, i + 2, "\n".join(b[ind:] for b in body)
i = j
continue
if val.startswith("["):
for part in re.findall(r"""['"]([^'"]+)['"]""", val):
yield key, i + 1, part
else:
yield key, i + 1, val.strip("'\"")
i += 1
def ci_yaml(u, ctx=""):
e = Emitter(u, ctx or "CI workflow")
text = u.text
triggers = []
for i, l in enumerate(e.lines, 1):
s = l.strip()
m = re.match(r"^(on|true)\s*:\s*(.*)$", l)
if m and m.group(2):
triggers += [(i, t) for t in re.findall(r"[\w-]+", m.group(2))]
m = re.match(r"^\s{1,6}(push|pull_request|pull_request_target|schedule|workflow_dispatch|workflow_run|"
r"issue_comment|issues|release|repository_dispatch|merge_group|workflow_call|discussion|fork|watch)\s*:", l)
if m:
triggers.append((i, m.group(1)))
m = re.match(r"^\s*-?\s*cron\s*:\s*['\"]?([^'\"]+)", l)
if m:
triggers.append((i, f"schedule {m.group(1).strip()}"))
for sm in P.CI_SECRET.finditer(l):
em = re.match(r"^\s*([A-Za-z_][\w-]*)\s*:\s*", l)
det = f"exposed as {em.group(1)}" if em and em.group(1) not in ("with", "env") else "CI secret reference"
e.add("secret_or_credential_path", i, f"CI secret {sm.group(1)}", det)
if re.search(r"\bpermissions\s*:\s*write-all|^\s*(contents|packages|id-token|actions|pull-requests)\s*:\s*write", l):
e.add("security_setting_change", i, "CI token permission " + s, "privilege/permission")
if re.search(r"\$\{\{\s*github\.event\.(issue|pull_request|comment|review|head_commit|discussion)\.[\w.]*(title|body|head\.ref|label|message|name|email)", l):
e.add("dynamic_import_or_eval", i, re.search(r"\$\{\{[^}]*\}\}", l).group(0), "untrusted event text interpolated into the workflow")
if re.search(r"ref\s*:\s*\$\{\{\s*github\.event\.pull_request\.head\.(sha|ref)", l):
e.add("install_or_startup_hook", i, "checks out PR head code", "pull-request code in CI")
m = re.match(r"^\s*-?\s*uses\s*:\s*['\"]?([^\s'\"]+)", l)
if m and not re.match(r"(actions|github)/", m.group(1)) and not m.group(1).startswith("./"):
e.add("process_spawn", i, f"action {m.group(1)}", "third-party CI action")
special = [t for _, t in triggers if t in ("pull_request_target", "workflow_run", "issue_comment") or t.startswith("schedule")]
names = list(dict.fromkeys(t for _, t in triggers))
if any(t.startswith("schedule ") for t in names):
names = [t for t in names if t != "schedule"]
special = [t for t in special if t != "schedule"]
if names and (u.focus is None or u.focus):
first = min((ln for ln, _ in triggers if u.in_focus(ln)), default=u.first_focus())
e.add("install_or_startup_hook", first, "CI triggers: " + ", ".join(names),
"runs automatically" + ("; " + ", ".join(dict.fromkeys(special)) if special else ""), force=u.focus is None or bool(u.focus))
for key, ln, body in _yaml_blocks(e.lines, _yaml_keys(u.path)):
if "${{" in body:
body = re.sub(r"\$\{\{\s*([^}]*?)\s*\}\}", lambda m: "CI_EXPR_" + re.sub(r"\W", "_", m.group(1))[:40], body)
e.sh(body, ln, ctx=f"CI {key}")
e.common()
return e.out
def precommit_yaml(u, ctx=""):
e = Emitter(u, ctx)
for i, l in enumerate(e.lines, 1):
m = re.match(r"^\s*-?\s*repo\s*:\s*(\S+)", l)
if m:
e.add("install_or_startup_hook", i, f"pre-commit repo {m.group(1)}", "git hook framework")
if m.group(1).startswith("http"):
e.add("network_egress", i, m.group(1), "pre-commit fetches hook repo")
for key, ln, body in _yaml_blocks(e.lines, r"(entry)"):
if key in ("entry",):
e.sh(body, ln, ctx="pre-commit hook entry")
e.common()
return e.out
def generic_yaml_json_toml(u, ctx=""):
e = Emitter(u, ctx)
for i, l in enumerate(e.lines, 1):
s = l.strip()
if not u.in_focus(i) or not s:
continue
for rx, label in P.REGISTRY[1:3]:
m = rx.search(s)
if m:
e.add("security_setting_change", i, f"{label}: {m.group(1)}", "registry setting")
if re.search(r"""['"]?runOn['"]?\s*:\s*['"]folderOpen""", s):
e.add("install_or_startup_hook", i, "task runOn folderOpen", "runs when the folder is opened in the editor")
m = re.search(r"""['"]command['"]\s*:\s*['"]([^'"]+)""", s)
if m and "tasks.json" in u.path:
e.sh(m.group(1), i, ctx="editor task")
e.common()
return e.out
def dockerfile(u, ctx=""):
e = Emitter(u, ctx or "container build")
buf, start = "", 0
for i, l in enumerate(e.lines + [""], 1):
if not buf:
start = i
buf += (" " if buf else "") + l.rstrip().rstrip("\\")
if l.rstrip().endswith("\\"):
continue
s = buf.strip()
buf = ""
m = re.match(r"(?i)(RUN|CMD|ENTRYPOINT)\s+(.*)", s)
if m:
cmd = m.group(2)
if cmd.startswith("["):
cmd = " ".join(re.findall(r'"((?:[^"\\]|\\.)*)"', cmd))
e.out.extend(shell.analyse(cmd, u.path, base_line=start, in_focus=lambda a, b, s=start, i=i: u.in_focus(s, i),
context=f"Dockerfile {m.group(1).upper()}"))
m = re.match(r"(?i)(ADD)\s+(?:--\S+\s+)*(https?://\S+)", s)
if m and u.in_focus(start, i):
e.add("network_egress", start, m.group(2), "Dockerfile ADD from URL", ctx="container build", force=True)
m = re.match(r"(?i)ENV\s+(.*)", s)
if m and u.in_focus(start, i):
for rx, label in P.TLS_OFF:
if rx.search(m.group(1)):
e.add("security_setting_change", start, label, "TLS verification off", force=True)
return e.out
def makefile(u, ctx=""):
e = Emitter(u, ctx)
target = ""
for i, l in enumerate(e.lines, 1):
m = re.match(r"^([\w./%-]+)\s*:(?!=)", l)
if m:
target = m.group(1)
continue
if l.startswith("\t") and u.in_focus(i):
cmd = l.strip().lstrip("@-+")
e.out.extend(shell.analyse(cmd, u.path, base_line=i, in_focus=u.in_focus, context=f"make {target}"))
return e.out
def pth(u, ctx=""):
e = Emitter(u, "interpreter startup (.pth)")
for i, l in enumerate(e.lines, 1):
if re.match(r"\s*import[\s\t]", l):
e.add("install_or_startup_hook", i, ".pth import line", "executes at every interpreter start")
e.add("persistence", i, "python startup (sitecustomize/.pth)", ".pth executable line")
e.add("dynamic_import_or_eval", i, clip(l.strip(), 100), ".pth code line")
for rx, label in P.TLS_OFF:
if rx.search(l):
e.add("security_setting_change", i, label, "TLS verification off")
if re.search(r"exec|eval|b64decode|__import__", l):
det = "decode_then_exec" if re.search(r"b64decode|decode\(|unhexlify", l) else None
if det:
e.add("decode_then_exec", i, clip(l.strip(), 100), "decoded data executed at startup")
e.common()
return e.out
def binary(u, ctx=""):
out = []
head = u.raw_head
kind = next((label for sig, label in MAGIC if head.startswith(sig)), "")
if not kind and len(head) > 262 and head[257:262] == b"ustar":
kind = "tar archive"
low = u.path.lower()
size = u.size
note = u.binary_note
if u.lang == "other" and note.startswith("symlink"):
out.append(Behaviour("file_write", u.path, 1, note, "", "symlink in package", ctx, "manifest"))
return out
is_archive = kind in ("zip archive", "gzip", "7z archive", "rar archive", "bzip2", "xz", "tar archive") or \
low.endswith(tuple(e for e in (".zip", ".tgz", ".tar", ".gz", ".7z", ".rar", ".whl", ".jar", ".egg", ".xz",
".bz2", ".crx", ".vsix", ".nupkg", ".zst")))
if low.endswith(MEDIA_EXT) or kind in MEDIA:
return out
sz = f"{size} bytes" if size else (note or "size unknown")
if is_archive:
out.append(Behaviour("archive_or_bundle", u.path, 1, f"{kind or 'archive'} ({sz})", note, "archive file", ctx, "manifest"))
else:
out.append(Behaviour("binary_files", u.path, 1, f"{kind or 'binary data'} ({sz})", note, "", ctx, "manifest"))
return out
def dispatch(u, ctx=""):
name = u.path.rsplit("/", 1)[-1]
if u.lang == "binary" or u.binary_note.startswith("symlink"):
return binary(u, ctx)
if name == "package.json":
return package_json(u, ctx)
if u.lang == "config":
return npmrc_like(u, ctx)
if u.lang == "requirements":
return requirements(u, ctx)
if u.lang == "pth":
return pth(u, ctx)
if u.lang == "dockerfile":
return dockerfile(u, ctx)
if u.lang == "makefile":
return makefile(u, ctx)
if u.lang == "yaml" and CI_PATH.search(u.path):
return ci_yaml(u, ctx)
if u.lang == "yaml" and name in (".pre-commit-config.yaml", ".pre-commit-hooks.yaml"):
return precommit_yaml(u, ctx)
if u.lang in ("toml", "ini"):
return toml_ini(u, ctx)
if u.lang in ("yaml", "json"):
return generic_yaml_json_toml(u, ctx)
return None
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