Yuning You commited on
Commit
6703fd7
·
1 Parent(s): 552cf9a
Files changed (1) hide show
  1. README.md +6 -1
README.md CHANGED
@@ -17,7 +17,12 @@ This is the PyTorch implementation of the CI-FM model -- an AI model that can si
17
  - **Embedding** of celllular microenvironments via ```embeddings = model.embed(adata)``` (Figure below panel D top);
18
  - **Inference** of cellular gene expressions at a certain microenvironment via ```expressions = model.predict_cells_at_locations(adata, rand_loc)``` (Figure below panel D bottom).
19
 
20
- The detailed usage of the model can be found in the [tutorial](https://huggingface.co/ynyou/CIFM/blob/main/test.ipynb).
 
 
 
 
 
21
  Before running the tutorial, please set up an environment following the [instruction](https://huggingface.co/ynyou/CIFM#environment).
22
 
23
  More information about the model can be found in the [preprint]().
 
17
  - **Embedding** of celllular microenvironments via ```embeddings = model.embed(adata)``` (Figure below panel D top);
18
  - **Inference** of cellular gene expressions at a certain microenvironment via ```expressions = model.predict_cells_at_locations(adata, rand_loc)``` (Figure below panel D bottom).
19
 
20
+ So after cloning the model and get into the model directory:
21
+ ```
22
+ git clone https://huggingface.co/ynyou/CIFM
23
+ cd CIFM
24
+ ```
25
+ the detailed usage of the model can be found in the [tutorial](https://huggingface.co/ynyou/CIFM/blob/main/test.ipynb).
26
  Before running the tutorial, please set up an environment following the [instruction](https://huggingface.co/ynyou/CIFM#environment).
27
 
28
  More information about the model can be found in the [preprint]().