Yuning You commited on
Commit
e4221d7
·
1 Parent(s): 3b9ec41
Files changed (1) hide show
  1. README.md +2 -0
README.md CHANGED
@@ -15,6 +15,8 @@ tags:
15
  This is the pytorch implementation of the CI-FM model -- an AI model that can simulate the cellular activities within a living tissue (AI virtual tissue). The signature functions of CI-FM are:
16
  - **Embedding** of celllular microenvironments via ```embeddings = model.embed(adata)``` (Figure below panel D top);
17
  - **Inference** of cellular gene expressions at a certain microenvironment via ```expressions = model.predict_cells_at_locations(adata, rand_loc)``` (Figure below panel D bottom).
 
18
  The detailed usage of the model can be found in the [tutorial](https://huggingface.co/ynyou/CIFM/blob/main/test.ipynb).
 
19
 
20
  ![](./figures/cifm.png)
 
15
  This is the pytorch implementation of the CI-FM model -- an AI model that can simulate the cellular activities within a living tissue (AI virtual tissue). The signature functions of CI-FM are:
16
  - **Embedding** of celllular microenvironments via ```embeddings = model.embed(adata)``` (Figure below panel D top);
17
  - **Inference** of cellular gene expressions at a certain microenvironment via ```expressions = model.predict_cells_at_locations(adata, rand_loc)``` (Figure below panel D bottom).
18
+
19
  The detailed usage of the model can be found in the [tutorial](https://huggingface.co/ynyou/CIFM/blob/main/test.ipynb).
20
+ More information about the model can be found in the [preprint]().
21
 
22
  ![](./figures/cifm.png)