| # Measured-data fixtures |
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| The included H5AD files contain subsets of released measured RNA counts. |
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| `examples/tahoe/tahoe.h5ad` was prepared from the Tahoe-100M expression shards 600, 601, and 2600, with the official sample and gene metadata. The subset contains A549 cells (CVCL_0023) from plates 6 and 14. Source records are retained in the observation fields. |
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| Source: https://huggingface.co/datasets/tahoebio/Tahoe-100M |
| License listed by the source dataset: CC0-1.0. |
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| `examples/sciplex/sciplex_prototype.h5ad` contains 120 A549 cells from the corrected sci-Plex3 object in scPerturb v1.4, with 24-hour exposures at 0.1 and 1 µM and matched controls. `source_row` identifies the original row. The subset includes nine compound names with exact matches to Tahoe structure metadata. |
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| Source: Peidli, Green, Shen, Gross, Min, Garda, Yuan, Schumacher, Taylor-King, Marks, Luna, Blüthgen, and Sander. scPerturb Single-Cell Perturbation Data, version 1.4. https://doi.org/10.5281/zenodo.13350497 |
| License: Creative Commons Attribution 4.0 International. https://creativecommons.org/licenses/by/4.0/ |
| Original sci-Plex publication: Srivatsan et al. Massively multiplex chemical transcriptomics at single-cell resolution. Science (2020). |
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| The fixture sizes are intended for execution checks. They do not support full-study performance conclusions. |
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