Emile de Bruyn

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authored a paper 3 days ago

Static Recovery Is Not Dynamic Stability: Dynamics-Aware Benchmarking of Protein Motif Scaffolding

Paper • 2611.07723 • Published 4 days ago

updated a Space 3 days ago

Running

PROFOUND

🧬

HFMI | Motion-aware foundation models for protein design

updated a dataset 3 days ago

HFMI-PROFOUND/BILBY-PRO

Viewer • Updated 2 days ago • 220 • 727 • 1

updated 2 collections 3 days ago

Selected Research & Open Resources

Collection

Research contributions in AI-driven molecular modelling, protein design, and molecular simulation. Datasets, benchmarks and publications. • 4 items • Updated 3 days ago

BILBY — Protein Design Benchmarking

Collection

PROSITE-derived functional motif benchmarks and molecular-dynamics-based evaluation of protein designs. • 2 items • Updated 2 days ago

authored a paper 4 days ago

mdRNAcat: A Molecular Dynamics RNA Catalog of REST2 Conformational Ensembles

Paper • 2610.35204 • Published 14 days ago

updated a collection 4 days ago

Selected Research & Open Resources

Collection

Research contributions in AI-driven molecular modelling, protein design, and molecular simulation. Datasets, benchmarks and publications. • 4 items • Updated 3 days ago

upvoted a paper 7 days ago

MotifBench: A standardized protein design benchmark for motif-scaffolding problems

Paper • 2502.12479 • Published Feb 18, 2025 • 2

updated a collection 7 days ago

BILBY — Protein Design Benchmarking

Collection

PROSITE-derived functional motif benchmarks and molecular-dynamics-based evaluation of protein designs. • 2 items • Updated 2 days ago

liked a dataset 7 days ago

HFMI-PROFOUND/BILBY-PRO

Viewer • Updated 2 days ago • 220 • 727 • 1

published a dataset 7 days ago

HFMI-PROFOUND/BILBY-PRO

Viewer • Updated 2 days ago • 220 • 727 • 1

published a Space 11 days ago

Running

PROFOUND

🧬

HFMI | Motion-aware foundation models for protein design

updated a dataset 12 days ago

HelmholtzAI-FZJ/mdRNAcat

Updated 12 days ago • 1.03k • 1

updated a collection 13 days ago

MADRNA — RNA Molecular Modelling Resources

Collection

MADRNA brings together molecular simulation datasets, models, and supporting research resources for the computational study of RNA. • 2 items • Updated 13 days ago

updated a collection 16 days ago

MADRNA — RNA Molecular Modelling Resources

Collection

MADRNA brings together molecular simulation datasets, models, and supporting research resources for the computational study of RNA. • 2 items • Updated 13 days ago

liked a dataset 16 days ago

HelmholtzAI-FZJ/mdRNAcat

Updated 12 days ago • 1.03k • 1

published a dataset 16 days ago

HelmholtzAI-FZJ/mdRNAcat

Updated 12 days ago • 1.03k • 1