Add RNASeek overview PDF and bioRxiv preprint links
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README.md
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This repository contains RNASeek checkpoints and fixed datasets for ribozyme catalytic-efficiency prediction, 3′ UTR-mediated RNA stability prediction, supervised sequence generation, and reinforcement-learning fine-tuning. It also includes encoder/GEMORNA benchmark artifacts and the underlying analysis data.
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## Installation
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The complete archive is approximately **475 GB**, plus space for environments and download caches. Use a filesystem with sufficient free space and quota. In a separate downloader environment with the Hugging Face CLI installed (`python -m pip install huggingface_hub==0.34.4`):
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This repository contains RNASeek checkpoints and fixed datasets for ribozyme catalytic-efficiency prediction, 3′ UTR-mediated RNA stability prediction, supervised sequence generation, and reinforcement-learning fine-tuning. It also includes encoder/GEMORNA benchmark artifacts and the underlying analysis data.
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See the [RNASeek overview (PDF)](overview_for_repo.pdf) and the [bioRxiv preprint](https://www.biorxiv.org/content/10.64898/2026.09.24.754173v1).
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## Installation
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The complete archive is approximately **475 GB**, plus space for environments and download caches. Use a filesystem with sufficient free space and quota. In a separate downloader environment with the Hugging Face CLI installed (`python -m pip install huggingface_hub==0.34.4`):
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overview_for_repo.pdf
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Binary file (63.7 kB). View file
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