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History: 11 commits

schen647

Update release documentation and model entry points

db88907 verified 17 days ago

RNASeek-lm-pretrained
Update release documentation and model entry points 17 days ago
RNASeek-regression-pretrained
Update release documentation and model entry points 17 days ago
benchmark_backbones
Add validated RiNALMo-Giga and Evo 2 benchmarks, revised figures and portable environments 19 days ago
efficiency_figure2
Clarify SFT and RLHF workflows, fix UTR preset, and consolidate shared regression base 17 days ago
figure_outputs
Add validated RiNALMo-Giga and Evo 2 benchmarks, revised figures and portable environments 19 days ago
pretraining
Update release documentation and model entry points 17 days ago
regression_stability_functionalviral
Update release documentation and model entry points 17 days ago
ribozymegen-figure7
Remove superseded release intermediates; preserve pretraining 20 days ago
ribozymegen-rl-figure7
Remove superseded release intermediates; preserve pretraining 20 days ago
tests
Update release documentation and model entry points 17 days ago
third_party
Add validated RiNALMo-Giga and Evo 2 benchmarks, revised figures and portable environments 19 days ago
utrgen-rl
Publish portable RNASeek workflows, fixed analyses, and tested checkpoints 20 days ago
utrgen
Update release documentation and model entry points 17 days ago
validation
Fix Conda user-site isolation and document successful HPCC regression and RLHF checks 18 days ago
.gitattributes

243 kB
Update release documentation and model entry points 17 days ago
README.md

40.4 kB
Update release documentation and model entry points 17 days ago
benchmark_checkpoint.py

4.67 kB
Publish portable RNASeek workflows, fixed analyses, and tested checkpoints 20 days ago
checkpoint_manifest.json

23.4 kB
xet

Update release documentation and model entry points 17 days ago
constraints-benchmark.txt

1.98 kB
Publish portable RNASeek workflows, fixed analyses, and tested checkpoints 20 days ago
constraints-core.txt

3.42 kB
Publish portable RNASeek workflows, fixed analyses, and tested checkpoints 20 days ago
constraints-evo2.txt

1.61 kB
Add validated RiNALMo-Giga and Evo 2 benchmarks, revised figures and portable environments 19 days ago
evo2_backbone.py

9.51 kB
Add validated RiNALMo-Giga and Evo 2 benchmarks, revised figures and portable environments 19 days ago
figures.ipynb

3.62 MB
Add validated RiNALMo-Giga and Evo 2 benchmarks, revised figures and portable environments 19 days ago
requirements-benchmark.txt

331 Bytes
Publish portable RNASeek workflows, fixed analyses, and tested checkpoints 20 days ago
requirements-evo2.txt

307 Bytes
Add validated RiNALMo-Giga and Evo 2 benchmarks, revised figures and portable environments 19 days ago
requirements.txt

628 Bytes
Publish portable RNASeek workflows, fixed analyses, and tested checkpoints 20 days ago
setup_env.sh

4.7 kB
Fix Conda user-site isolation and document successful HPCC regression and RLHF checks 18 days ago
train_regression.py

5.67 kB
Clarify SFT and RLHF workflows, fix UTR preset, and consolidate shared regression base 17 days ago
train_sft.py

8.64 kB
Clarify SFT and RLHF workflows, fix UTR preset, and consolidate shared regression base 17 days ago
validate_release.py

9.11 kB
Update release documentation and model entry points 17 days ago