| --- |
| library_name: locus |
| tags: |
| - dna |
| - genomics |
| - locally-consistent-parsing |
| --- |
| |
| # locus-2m |
|
|
| LoCUS-2M: width 128, 4 kb context. |
|
|
| - Segments: lcp (level 2) |
| - Width 128, 4 heads, base attention radii [32, 128], 6 segment layers |
| - Pretrained for 359,466 steps on GRCh38 chromosomes 3-22, crops of 256-4096 bp |
|
|
| ## Use |
|
|
| ```python |
| import locus |
| |
| model = locus.load("locus-2m") |
| vectors = model.embed(["ACGT" * 100]) |
| ``` |
|
|
| Code, fine-tuning recipes and the scripts that reproduce every result of the paper: see the LoCUS repository. |
|
|
