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autoencodix
/
Varix-Dim48-Varix
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autoencodix
6
Feature Extraction
autoencodix
single-cell
scRNA-seq
autoencoder
variational-autoencoder
biology
License:
apache-2.0
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Varix-Dim48-Varix
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README.md
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large_varix_final_model_Dim48_Varix.pkl
Unsafe
pickle
Detected Pickle imports (60)
"autoencodix.varix.Varix"
,
"autoencodix.configs.default_config.DataCase"
,
"lightning_fabric.strategies.single_device.SingleDeviceStrategy"
,
"torch._utils._rebuild_tensor_v2"
,
"anndata._core.aligned_mapping.Layers"
,
"pandas.core.indexes.base._new_Index"
,
"numpy.dtype"
,
"pandas.core.indexes.base.Index"
,
"lightning_fabric.plugins.environments.slurm.SLURMEnvironment"
,
"autoencodix.utils._screader.SingleCellDataReader"
,
"autoencodix.utils._result.LossRegistry"
,
"pandas.core.internals.managers.BlockManager"
,
"autoencodix.data.general_preprocessor.GeneralPreprocessor"
,
"torch.device"
,
"anndata._core.aligned_mapping.AxisArrays"
,
"autoencodix.modeling._varix_architecture.VarixArchitecture"
,
"autoencodix.data._datasplitter.DataSplitter"
,
"pandas.core.indexes.range.RangeIndex"
,
"autoencodix.utils._imgreader.ImageDataReader"
,
"autoencodix.configs.default_config.DataConfig"
,
"dill._dill._create_array"
,
"autoencodix.configs.varix_config.VarixConfig"
,
"pandas.core.frame.DataFrame"
,
"numpy._core.multiarray._reconstruct"
,
"autoencodix.data._numeric_dataset.NumericDataset"
,
"autoencodix.data._datasetcontainer.DatasetContainer"
,
"lightning_fabric.accelerators.cuda.CUDAAccelerator"
,
"autoencodix.utils._result.Result"
,
"dill._dill._load_type"
,
"typing.Any"
,
"typing.Dict"
,
"anndata._core.aligned_mapping.PairwiseArrays"
,
"torch.nn.modules.dropout.Dropout"
,
"torch.nn.modules.container.Sequential"
,
"autoencodix.data.datapackage.DataPackage"
,
"autoencodix.utils._traindynamics.TrainingDynamics"
,
"lightning_fabric.fabric.Fabric._wrap_and_launch"
,
"numpy.ndarray"
,
"lightning_fabric.plugins.precision.precision.Precision"
,
"torch._utils._rebuild_parameter"
,
"autoencodix.trainers._general_trainer.GeneralTrainer"
,
"torch.nn.modules.activation.ReLU"
,
"torch.nn.modules.batchnorm.BatchNorm1d"
,
"autoencodix.losses.varix_loss.VarixLoss"
,
"autoencodix.utils._bulkreader.BulkDataReader"
,
"collections.OrderedDict"
,
"collections.defaultdict"
,
"_operator.getitem"
,
"autoencodix.utils._utils.nested_dict"
,
"anndata._core.anndata.AnnData"
,
"lightning_fabric.fabric.Fabric.run"
,
"autoencodix.evaluate._general_evaluator.GeneralEvaluator"
,
"torch.storage._load_from_bytes"
,
"typing.Union"
,
"lightning_fabric.connector._Connector"
,
"autoencodix.visualize._general_visualizer.GeneralVisualizer"
,
"torch.nn.modules.linear.Linear"
,
"anndata._core.file_backing.AnnDataFileManager"
,
"signal.SIGUSR1"
,
"lightning_fabric.fabric.Fabric"
How to fix it?
1.34 GB
xet
Upload large_varix_final_model_Dim48_Varix.pkl with huggingface_hub
5 days ago
large_varix_final_model_Dim48_Varix_model.pth
1.34 GB
xet
Upload large_varix_final_model_Dim48_Varix_model.pth with huggingface_hub
5 days ago
large_varix_final_model_Dim48_Varix_preprocessor.pkl
Unsafe
pickle
Detected Pickle imports (13)
"autoencodix.data.general_preprocessor.GeneralPreprocessor"
,
"autoencodix.data.datapackage.DataPackage"
,
"dill._dill._load_type"
,
"autoencodix.configs.varix_config.VarixConfig"
,
"autoencodix.utils._bulkreader.BulkDataReader"
,
"typing.Dict"
,
"autoencodix.utils._imgreader.ImageDataReader"
,
"_operator.getitem"
,
"autoencodix.configs.default_config.DataConfig"
,
"autoencodix.configs.default_config.DataCase"
,
"typing.Any"
,
"autoencodix.utils._screader.SingleCellDataReader"
,
"typing.Union"
How to fix it?
2.38 kB
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5 days ago