GPN-Star
paper: https://www.nature.com/articles/s41586-026-11005-5 code: https://github.com/songlab-cal/gpn
Viewer • Updated • 51.4B • 7.53k • 5Note Genome-wide scores
songlab/gpn-star-hg38-v100-200m
0.2B • Updated • 216 • 3Note Vertebrates model
songlab/gpn-star-hg38-m447-200m
0.2B • Updated • 56 • 1Note Mammals model
songlab/gpn-star-hg38-p243-200m
0.2B • Updated • 58 • 2Note Primates model
songlab/gpn-star-mm39-v35-85m
86.1M • Updated • 15Note Mouse model
songlab/gpn-star-galGal6-v77-85m
86.1M • Updated • 13Note Chicken model
songlab/gpn-star-dm6-i124-85m
86.1M • Updated • 11Note Drosophila model
songlab/gpn-star-ce11-n135-25m
25.9M • Updated • 28Note C. elegans model
songlab/gpn-star-tair10-b18-25m
25.9M • Updated • 35Note Arabidopsis model
songlab/multiz100way-pigz
Viewer • Updated • 7.21M • 431Note Human and 100 vertebrates alignment
songlab/hg38_cactus447way
Viewer • Updated • 13.6M • 6.16kNote Human and 447 mammals alignment
songlab/mm39_multiz35way
Viewer • Updated • 35 • 53Note Mouse and 35 vertebrates alignment
songlab/galGal6_multiz77way
Viewer • Updated • 77 • 33Note Chicken and 77 vertebrates alignment
songlab/dm6_multiz124way
Viewer • Updated • 124 • 22Note Drosophila and 124 insects alignment
songlab/ce11_multiz135way
Viewer • Updated • 135 • 28Note C. elegans and 135 nematodes alignment
songlab/tair10_multiz18way
Viewer • Updated • 18 • 61Note Arabidopsis and 18 Brassicales alignment
songlab/ldsc
Viewer • Updated • 10M • 1.6kNote S-LDSC variants and model predictions
songlab/cosmic
Viewer • Updated • 18.9k • 358 • 2Note COSMIC variants and model predictions
songlab/clinvar_vs_benign
Viewer • Updated • 50.2k • 278 • 1Note ClinVar variants and model predictions
songlab/ukb_finemapped_coding
Viewer • Updated • 2.22k • 89 • 1Note UKBB finemapped coding variants and model predictions
songlab/ukb_finemapped_nc_traitgym
Viewer • Updated • 11.4k • 186 • 1Note UKBB finemapped non-coding variants and model predictions
songlab/omim_traitgym
Viewer • Updated • 3.38k • 411Note OMIM regulatory variants and model predictions
songlab/gnomad_balanced
Viewer • Updated • 12M • 173Note gnomAD variants and model predictions
songlab/wmgp_balanced
Viewer • Updated • 50.1M • 74Note Mouse WMGP variants and model predictions
songlab/dest
Viewer • Updated • 1.09M • 25Note Drosophila DEST variants and model predictions
songlab/caendr
Viewer • Updated • 650k • 17Note C. elegans CaeNDR variants and model predictions
songlab/galbase
Viewer • Updated • 9.49M • 29Note Chicken Galbase variants and model predictions
songlab/1001gp
Viewer • Updated • 4.4M • 55Note Arabidopsis 1001 Genomes Project variants and model predictions
songlab/mmrdb
Viewer • Updated • 504k • 31Note Mouse MMRdb variants and model predictions
songlab/flybase_lethal
Viewer • Updated • 42.1k • 32Note Drosophila FlyBase variants and model predictions
songlab/celegans_lethal
Viewer • Updated • 22.3k • 32Note C. elegans lethal variants and model predictions
songlab/gpn-star-umap-regions
Viewer • Updated • 111k • 32Note Regions used in UMAP analysis