Datasets:

Bhupati1998
/

BioEvidence-Datasets

language:
  - en
license: mit
task_categories:
  - question-answering
  - text2text-generation
tags:
  - biomedical
  - pubmedqa
  - medquad
  - evidence-based-medicine
pretty_name: BioEvidence-SFT
size_categories:
  - 1K<n<10K

Dataset Card: BioEvidence-SFT & BioEvidence-Eval

Dataset Summary

The BioEvidence-SFT and BioEvidence-Eval datasets are curated instruction-tuning and benchmarking corpora designed for evidence-grounded biomedical NLP tasks.

GitHub Repository (Code & Pipeline): https://github.com/PRATHMESHTALHANDE/BioEvidence-LLM-4bit-QLoRA
Model Adapter: https://huggingface.co/Bhupati1998/BioEvidence-LLM-1.5B

Subsets & Splits

BioEvidence-SFT-v0.1: 100 balanced pilot samples across all 7 taxonomy tasks (100% human-rubric validated).
BioEvidence-SFT-full: 880 multi-source training samples formatted in ChatML format.
BioEvidence-Eval-v0.1: 156 held-out evaluation samples with zero article/PMID overlap with training data.

Provenance & Sources

PubMedQA (MIT License): Expert-annotated research questions with yes/no/maybe decisions.
MedQuAD (NIH Public Domain): 12 NIH institute consumer and clinician health resources.
PubMed (NCBI E-utilities): Controlled queries for randomized clinical trials.
PMC Open Access (CC-BY): Full-text open-access articles via the BioC API.

Leakage Prevention

All splits are grouped strictly by PubMed ID (PMID) or PubMed Central ID (PMCID). No articles or abstracts exist in both training and evaluation subsets.