CancerVerse: 6 ct.nii.gz files are corrupt on Hugging Face
#11
by LiangRenjie - opened
Hi, thanks for releasing CancerVerse.
While processing BodyMaps/CancerVerse (revision c15802c2), 6 ct.nii.gz files fail to decompress. Re-downloading gives byte-identical files whose sha256 matches the Hugging Face metadata, so the files seem to be corrupt in the repository itself:
| case | error (Python gzip) |
|---|---|
| CV_00000989 | invalid block type |
| CV_00001641 | invalid stored block lengths |
| CV_00010215 | invalid literal/length code |
| CV_00016767 | too many length or distance symbols |
| CV_00011576 | not a gzipped file (starts with zero bytes) |
| CV_00018563 | not a gzipped file (starts with zero bytes) |
The other 24,416 files decompress fine. To check one: python -c "import gzip; gzip.open('CancerVerse/CV_00000989/ct.nii.gz').read()"
Thanks!
Hi @LiangRenjie ,
Thanks for reporting these 6 corrupted files. I will check whether we have good copies internally. If so, I will re-upload them soon. If not, I will contact our data provider for a solution.
Will post an update here either way.
Thanks,
Wenxuan