| # Data Sources and Attribution |
|
|
| This release packages processed protein objects, labels, and split lists for |
| E3former. Source data retain their original notices and license terms. |
| Our packaging and documentation are licensed under [CC BY 4.0](LICENSE). |
|
|
| | Component | Source | Upstream license | |
| |---|---|---| |
| | CATH classification | [CATH](https://www.cathdb.info/wiki/doku/?id=start) | [CC BY 4.0](https://creativecommons.org/licenses/by/4.0/) | |
| | PPBS labels and evaluation subsets | [ScanNet](https://github.com/jertubiana/ScanNet/tree/main/datasets/PPBS) | [Apache 2.0](licenses/ScanNet-APACHE-2.0.txt) | |
|
|
| The upstream ScanNet license is retained unchanged. The processed objects in |
| this release were prepared for the E3former data loader; they are not the |
| original ScanNet distribution. |
|
|
| ScanNet reference: Tubiana, J., Schneidman-Duhovny, D., and Wolfson, H. J. |
| ScanNet: an interpretable geometric deep learning model for structure-based |
| protein binding site prediction. Nature Methods 19, 730-739 (2022). |
| https://doi.org/10.1038/s41592-022-01490-7 |
|
|
| AlphaFold reference: Jumper, J. et al. Highly accurate protein structure |
| prediction with AlphaFold. Nature 596, 583-589 (2021). |
| https://doi.org/10.1038/s41586-021-03819-2 |
|
|
| The E3former code license does not replace upstream dataset licenses. |
|
|
