FoldingCorpus / README.md
liuyong9975's picture
Publish FoldingCorpus release data and dataset card
0544d43 verified
|
Raw History Blame Contribute Delete
1.69 kB
metadata
pretty_name: FoldingCorpus
license: mit
configs:
  - config_name: default
    default: true
    data_files:
      - split: train
        path: corpus/train.jsonl
      - split: validation
        path: corpus/dev.jsonl
      - split: test
        path: corpus/frozen_test.jsonl
  - config_name: protein_training
    data_files:
      - split: train
        path: protein_training/train.jsonl
      - split: validation
        path: protein_training/dev.jsonl
      - split: test
        path: protein_training/test.jsonl

FoldingCorpus

Protein-derived supervised question-answer records for Fold2Reason. The default configuration contains 12,000 train, 1,200 validation, and 1,200 frozen-test question records from 1,000 / 100 / 100 proteins. The protein_training configuration contains the associated BB4Q10 input/target records (1,000 / 100 / 100). Audit and manifest JSON files are retained under corpus/ but excluded from the load_dataset split definitions.

from datasets import load_dataset
corpus = load_dataset("GENTEL-Lab/FoldingCorpus")
proteins = load_dataset("GENTEL-Lab/FoldingCorpus", "protein_training")

Paper: https://huggingface.co/papers/2609.38879
Code and reproduction instructions: https://github.com/GENTEL-lab/Fold2Reason

Source: project dataset.zip, SHA-256 97ef38130fec0b7caaa323022d5b7bef620e7b26dfa42a1da4713066806dd90b. The original release files are unchanged. Exact per-file hashes and source paths are in SOURCE_PROVENANCE.json. The protein records derive from a selected OpenFold high-confidence distillation snapshot. The project owner confirmed redistribution for this public release; the original acquisition record is documented as pending in the project release checklist.