Preserve remaining raw simulation records batch 27
Browse files- raw/v4b/validation/untrained/24h/rep02_odor0_side1/learning_states.npz +3 -0
- raw/v4b/validation/untrained/24h/rep02_odor0_side1/physics_history.parquet +3 -0
- raw/v4b/validation/untrained/24h/rep02_odor0_side1/replay.npz +3 -0
- raw/v4b/validation/untrained/24h/rep02_odor0_side1/state_history.parquet +3 -0
- raw/v4b/validation/untrained/24h/rep02_odor0_side1/summary.json +29 -0
- raw/v4b/validation/untrained/24h/rep02_odor1_side0/individual_configuration.json +103 -0
- raw/v4b/validation/untrained/24h/rep02_odor1_side0/learning_history.parquet +3 -0
- raw/v4b/validation/untrained/24h/rep02_odor1_side0/learning_states.npz +3 -0
- raw/v4b/validation/untrained/24h/rep02_odor1_side0/physics_history.parquet +3 -0
- raw/v4b/validation/untrained/24h/rep02_odor1_side0/replay.npz +3 -0
- raw/v4b/validation/untrained/24h/rep02_odor1_side0/state_history.parquet +3 -0
- raw/v4b/validation/untrained/24h/rep02_odor1_side0/summary.json +29 -0
- raw/v4b/validation/untrained/24h/rep02_odor1_side1/individual_configuration.json +103 -0
- raw/v4b/validation/untrained/24h/rep02_odor1_side1/learning_history.parquet +3 -0
- raw/v4b/validation/untrained/24h/rep02_odor1_side1/learning_states.npz +3 -0
- raw/v4b/validation/untrained/24h/rep02_odor1_side1/physics_history.parquet +3 -0
- raw/v4b/validation/untrained/24h/rep02_odor1_side1/replay.npz +3 -0
- raw/v4b/validation/untrained/24h/rep02_odor1_side1/state_history.parquet +3 -0
- raw/v4b/validation/untrained/24h/rep02_odor1_side1/summary.json +29 -0
- raw/v4b/validation/untrained/24h/rep03_odor0_side0/individual_configuration.json +103 -0
- raw/v4b/validation/untrained/24h/rep03_odor0_side0/learning_history.parquet +3 -0
- raw/v4b/validation/untrained/24h/rep03_odor0_side0/learning_states.npz +3 -0
- raw/v4b/validation/untrained/24h/rep03_odor0_side0/physics_history.parquet +3 -0
- raw/v4b/validation/untrained/24h/rep03_odor0_side0/replay.npz +3 -0
- raw/v4b/validation/untrained/24h/rep03_odor0_side0/state_history.parquet +3 -0
- raw/v4b/validation/untrained/24h/rep03_odor0_side0/summary.json +29 -0
- raw/v4b/validation/untrained/24h/rep03_odor0_side1/individual_configuration.json +103 -0
- raw/v4b/validation/untrained/24h/rep03_odor0_side1/learning_history.parquet +3 -0
raw/v4b/validation/untrained/24h/rep02_odor0_side1/learning_states.npz
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raw/v4b/validation/untrained/24h/rep02_odor0_side1/physics_history.parquet
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version https://git-lfs.github.com/spec/v1
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size 2492344
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raw/v4b/validation/untrained/24h/rep02_odor0_side1/replay.npz
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version https://git-lfs.github.com/spec/v1
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raw/v4b/validation/untrained/24h/rep02_odor0_side1/state_history.parquet
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version https://git-lfs.github.com/spec/v1
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size 158949
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raw/v4b/validation/untrained/24h/rep02_odor0_side1/summary.json
ADDED
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| 1 |
+
{
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| 2 |
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"model": "consolidating",
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| 3 |
+
"condition": "untrained",
|
| 4 |
+
"delay_h": 24.0,
|
| 5 |
+
"replicate": 2,
|
| 6 |
+
"paired_odor": "A",
|
| 7 |
+
"b_left": true,
|
| 8 |
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"fly_id": "consolidating_untrained_24h_2_0_1",
|
| 9 |
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"gait_seed": 3683101540,
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| 10 |
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"sensory_seed": 939505906,
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| 11 |
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"motor_seed": 990262418,
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| 12 |
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"heading_seed": 1647498582,
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| 13 |
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"motor_noise_sd": 0.19626103889337373,
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| 14 |
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"seed": 2356870477,
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| 15 |
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"learning_gain": 0.6692929400759209,
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| 16 |
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"choice": "A",
|
| 17 |
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"choice_latency_s": 5.915500000000001,
|
| 18 |
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"termination": "test_window_complete",
|
| 19 |
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"score": 1,
|
| 20 |
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"neural_value_difference": 0.0,
|
| 21 |
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"physics_ticks": 59155,
|
| 22 |
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"control_rows": 6000,
|
| 23 |
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"assay_duration_s": 120.0,
|
| 24 |
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"test_start_biological_s": 96000.0,
|
| 25 |
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"captured": true,
|
| 26 |
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"physical_time_s": 5.915500000000001,
|
| 27 |
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"capture_policy": "absorbing collection region; approximation to collection vials",
|
| 28 |
+
"diagnostic": false
|
| 29 |
+
}
|
raw/v4b/validation/untrained/24h/rep02_odor1_side0/individual_configuration.json
ADDED
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@@ -0,0 +1,103 @@
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| 1 |
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{
|
| 2 |
+
"config": {
|
| 3 |
+
"schema_version": 1,
|
| 4 |
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"dataset": "FlyWire FAFB v783",
|
| 5 |
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"master_seed": 920618,
|
| 6 |
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"odor_encoding_seed": 7331,
|
| 7 |
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"min_pair_synapses": 5,
|
| 8 |
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"kc_threshold": 0.15,
|
| 9 |
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"kc_sparsity_quantile": 0.85,
|
| 10 |
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"odor_sparsity": 0.2,
|
| 11 |
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"acquisition_per_s": 0.0015,
|
| 12 |
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"aversive_tau_h": 4.0,
|
| 13 |
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"consolidation_tau_h": 12.0,
|
| 14 |
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"long_memory_tau_h": 168,
|
| 15 |
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"appetitive_scale": 1,
|
| 16 |
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"aversive_scale": 1.0,
|
| 17 |
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"decay_only_appetitive_scale": 0.35,
|
| 18 |
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"ethanol_uptake_tau_s": 120,
|
| 19 |
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"ethanol_clearance_tau_s": 300,
|
| 20 |
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"training_exposure_s": 600,
|
| 21 |
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"training_interval_s": 3000,
|
| 22 |
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"conditioning_sessions": 3,
|
| 23 |
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"biological_step_s": 60,
|
| 24 |
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"delays_h": [
|
| 25 |
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0.5,
|
| 26 |
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3,
|
| 27 |
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6,
|
| 28 |
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12,
|
| 29 |
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24
|
| 30 |
+
],
|
| 31 |
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"conditions": [
|
| 32 |
+
"untrained",
|
| 33 |
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"paired",
|
| 34 |
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"unpaired",
|
| 35 |
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"dan_silenced",
|
| 36 |
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"dan_acquisition",
|
| 37 |
+
"dan_consolidation"
|
| 38 |
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],
|
| 39 |
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"models": [
|
| 40 |
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"consolidating",
|
| 41 |
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"decay_only"
|
| 42 |
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],
|
| 43 |
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"learning_dan_dependence": false,
|
| 44 |
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"calibration_delays_h": [
|
| 45 |
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0.5,
|
| 46 |
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24
|
| 47 |
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],
|
| 48 |
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"prediction_delays_h": [
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| 49 |
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| 50 |
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|
| 51 |
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|
| 52 |
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],
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| 53 |
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"motor_value_gain": 4.0,
|
| 54 |
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"innate_value": 0.15,
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| 55 |
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"test_duration_s": 120.0,
|
| 56 |
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"physics_dt_s": 0.0001,
|
| 57 |
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"control_dt_s": 0.02,
|
| 58 |
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|
| 59 |
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"max_turn": 0.6,
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| 60 |
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"turn_gain": 120.0,
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| 61 |
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| 62 |
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"source_x_mm": 19,
|
| 63 |
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"source_y_mm": 9,
|
| 64 |
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"odor_length_mm": 40.0,
|
| 65 |
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"choice_x_mm": 12,
|
| 66 |
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"choice_abs_y_mm": 2.5,
|
| 67 |
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"odor_noise_sd": 0.0008,
|
| 68 |
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"video_fps": 25,
|
| 69 |
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"protocol": "paper_paired",
|
| 70 |
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"center_motor_readout": true,
|
| 71 |
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"adaptation_epsilon": 0.01,
|
| 72 |
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"motor_denominator_floor": 0.05,
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| 73 |
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"stem_mm": 30.0,
|
| 74 |
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"arm_mm": 60.0,
|
| 75 |
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"corridor_width_mm": 10.0,
|
| 76 |
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"collection_depth_mm": 8.0,
|
| 77 |
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"capture_policy": "absorbing collection region; approximation to collection vials",
|
| 78 |
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"readout": "functional concentration-normalized population contrast",
|
| 79 |
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"fitted_delays_h": [
|
| 80 |
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0.5,
|
| 81 |
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24.0
|
| 82 |
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],
|
| 83 |
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"held_out_delays_h": [
|
| 84 |
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3.0,
|
| 85 |
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6.0,
|
| 86 |
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12.0,
|
| 87 |
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15.0,
|
| 88 |
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48.0
|
| 89 |
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],
|
| 90 |
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"individual_controller_v4": true,
|
| 91 |
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"behavioral_gain": 50.0,
|
| 92 |
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|
| 93 |
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},
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| 94 |
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"phenotype": {
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| 95 |
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| 96 |
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| 103 |
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|
raw/v4b/validation/untrained/24h/rep02_odor1_side0/learning_history.parquet
ADDED
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version https://git-lfs.github.com/spec/v1
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size 11233
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raw/v4b/validation/untrained/24h/rep02_odor1_side0/learning_states.npz
ADDED
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version https://git-lfs.github.com/spec/v1
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size 18116
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raw/v4b/validation/untrained/24h/rep02_odor1_side0/physics_history.parquet
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+
version https://git-lfs.github.com/spec/v1
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size 2426724
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raw/v4b/validation/untrained/24h/rep02_odor1_side0/replay.npz
ADDED
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+
version https://git-lfs.github.com/spec/v1
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size 82713
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raw/v4b/validation/untrained/24h/rep02_odor1_side0/state_history.parquet
ADDED
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version https://git-lfs.github.com/spec/v1
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size 158324
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raw/v4b/validation/untrained/24h/rep02_odor1_side0/summary.json
ADDED
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@@ -0,0 +1,29 @@
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| 1 |
+
{
|
| 2 |
+
"model": "consolidating",
|
| 3 |
+
"condition": "untrained",
|
| 4 |
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"delay_h": 24.0,
|
| 5 |
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"replicate": 2,
|
| 6 |
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"paired_odor": "B",
|
| 7 |
+
"b_left": false,
|
| 8 |
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"fly_id": "consolidating_untrained_24h_2_1_0",
|
| 9 |
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|
| 10 |
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|
| 11 |
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|
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| 14 |
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"seed": 3314638847,
|
| 15 |
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"learning_gain": 1.0994053933407026,
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| 16 |
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"choice": "B",
|
| 17 |
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|
| 18 |
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"termination": "test_window_complete",
|
| 19 |
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"score": 1,
|
| 20 |
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|
| 21 |
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"physics_ticks": 57618,
|
| 22 |
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|
| 23 |
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|
| 24 |
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|
| 25 |
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"captured": true,
|
| 26 |
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"physical_time_s": 5.7618,
|
| 27 |
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"capture_policy": "absorbing collection region; approximation to collection vials",
|
| 28 |
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"diagnostic": false
|
| 29 |
+
}
|
raw/v4b/validation/untrained/24h/rep02_odor1_side1/individual_configuration.json
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raw/v4b/validation/untrained/24h/rep03_odor0_side0/replay.npz
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raw/v4b/validation/untrained/24h/rep03_odor0_side0/summary.json
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raw/v4b/validation/untrained/24h/rep03_odor0_side1/individual_configuration.json
ADDED
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{
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raw/v4b/validation/untrained/24h/rep03_odor0_side1/learning_history.parquet
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