Histochemichael commited on
Commit
59ba2b2
·
verified ·
1 Parent(s): fbe72af

Preserve remaining raw simulation records batch 17

Browse files
Files changed (28) hide show
  1. raw/v4b/validation/untrained/0.5h/rep00_odor0_side1/learning_states.npz +3 -0
  2. raw/v4b/validation/untrained/0.5h/rep00_odor0_side1/physics_history.parquet +3 -0
  3. raw/v4b/validation/untrained/0.5h/rep00_odor0_side1/replay.npz +3 -0
  4. raw/v4b/validation/untrained/0.5h/rep00_odor0_side1/state_history.parquet +3 -0
  5. raw/v4b/validation/untrained/0.5h/rep00_odor0_side1/summary.json +29 -0
  6. raw/v4b/validation/untrained/0.5h/rep00_odor1_side0/individual_configuration.json +103 -0
  7. raw/v4b/validation/untrained/0.5h/rep00_odor1_side0/learning_history.parquet +3 -0
  8. raw/v4b/validation/untrained/0.5h/rep00_odor1_side0/learning_states.npz +3 -0
  9. raw/v4b/validation/untrained/0.5h/rep00_odor1_side0/physics_history.parquet +3 -0
  10. raw/v4b/validation/untrained/0.5h/rep00_odor1_side0/replay.npz +3 -0
  11. raw/v4b/validation/untrained/0.5h/rep00_odor1_side0/state_history.parquet +3 -0
  12. raw/v4b/validation/untrained/0.5h/rep00_odor1_side0/summary.json +29 -0
  13. raw/v4b/validation/untrained/0.5h/rep00_odor1_side1/individual_configuration.json +103 -0
  14. raw/v4b/validation/untrained/0.5h/rep00_odor1_side1/learning_history.parquet +3 -0
  15. raw/v4b/validation/untrained/0.5h/rep00_odor1_side1/learning_states.npz +3 -0
  16. raw/v4b/validation/untrained/0.5h/rep00_odor1_side1/physics_history.parquet +3 -0
  17. raw/v4b/validation/untrained/0.5h/rep00_odor1_side1/replay.npz +3 -0
  18. raw/v4b/validation/untrained/0.5h/rep00_odor1_side1/state_history.parquet +3 -0
  19. raw/v4b/validation/untrained/0.5h/rep00_odor1_side1/summary.json +29 -0
  20. raw/v4b/validation/untrained/0.5h/rep01_odor0_side0/individual_configuration.json +103 -0
  21. raw/v4b/validation/untrained/0.5h/rep01_odor0_side0/learning_history.parquet +3 -0
  22. raw/v4b/validation/untrained/0.5h/rep01_odor0_side0/learning_states.npz +3 -0
  23. raw/v4b/validation/untrained/0.5h/rep01_odor0_side0/physics_history.parquet +3 -0
  24. raw/v4b/validation/untrained/0.5h/rep01_odor0_side0/replay.npz +3 -0
  25. raw/v4b/validation/untrained/0.5h/rep01_odor0_side0/state_history.parquet +3 -0
  26. raw/v4b/validation/untrained/0.5h/rep01_odor0_side0/summary.json +29 -0
  27. raw/v4b/validation/untrained/0.5h/rep01_odor0_side1/individual_configuration.json +103 -0
  28. raw/v4b/validation/untrained/0.5h/rep01_odor0_side1/learning_history.parquet +3 -0
raw/v4b/validation/untrained/0.5h/rep00_odor0_side1/learning_states.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e106b4d74fd1d0d5889ba3ad646a44443b6fc2bc768f6f12ec7651c01748f8ee
3
+ size 18116
raw/v4b/validation/untrained/0.5h/rep00_odor0_side1/physics_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:0f77d73e098bbfb542e750a392e98b236161e4da8798856e6213bd824a2ce810
3
+ size 2441511
raw/v4b/validation/untrained/0.5h/rep00_odor0_side1/replay.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:7290886b196ab044ef4578b5a509ebabba8c8797b104c29b05c6fb0181951d4e
3
+ size 82714
raw/v4b/validation/untrained/0.5h/rep00_odor0_side1/state_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:bbc737335deb8bad90edc6ce49c1abc3adb84df2c50bd6cbd10fd88aba094655
3
+ size 158171
raw/v4b/validation/untrained/0.5h/rep00_odor0_side1/summary.json ADDED
@@ -0,0 +1,29 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "model": "consolidating",
3
+ "condition": "untrained",
4
+ "delay_h": 0.5,
5
+ "replicate": 0,
6
+ "paired_odor": "A",
7
+ "b_left": true,
8
+ "fly_id": "consolidating_untrained_0.5h_0_0_1",
9
+ "gait_seed": 2832319354,
10
+ "sensory_seed": 173653827,
11
+ "motor_seed": 2349997503,
12
+ "heading_seed": 2499522671,
13
+ "motor_noise_sd": 0.2063456949228189,
14
+ "seed": 3645074975,
15
+ "learning_gain": 0.6809864364837765,
16
+ "choice": "A",
17
+ "choice_latency_s": 5.797000000000001,
18
+ "termination": "test_window_complete",
19
+ "score": 1,
20
+ "neural_value_difference": 0.0,
21
+ "physics_ticks": 57970,
22
+ "control_rows": 6000,
23
+ "assay_duration_s": 120.0,
24
+ "test_start_biological_s": 11400.0,
25
+ "captured": true,
26
+ "physical_time_s": 5.797000000000001,
27
+ "capture_policy": "absorbing collection region; approximation to collection vials",
28
+ "diagnostic": false
29
+ }
raw/v4b/validation/untrained/0.5h/rep00_odor1_side0/individual_configuration.json ADDED
@@ -0,0 +1,103 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "config": {
3
+ "schema_version": 1,
4
+ "dataset": "FlyWire FAFB v783",
5
+ "master_seed": 920618,
6
+ "odor_encoding_seed": 7331,
7
+ "min_pair_synapses": 5,
8
+ "kc_threshold": 0.15,
9
+ "kc_sparsity_quantile": 0.85,
10
+ "odor_sparsity": 0.2,
11
+ "acquisition_per_s": 0.0015,
12
+ "aversive_tau_h": 4.0,
13
+ "consolidation_tau_h": 12.0,
14
+ "long_memory_tau_h": 168,
15
+ "appetitive_scale": 1,
16
+ "aversive_scale": 1.0,
17
+ "decay_only_appetitive_scale": 0.35,
18
+ "ethanol_uptake_tau_s": 120,
19
+ "ethanol_clearance_tau_s": 300,
20
+ "training_exposure_s": 600,
21
+ "training_interval_s": 3000,
22
+ "conditioning_sessions": 3,
23
+ "biological_step_s": 60,
24
+ "delays_h": [
25
+ 0.5,
26
+ 3,
27
+ 6,
28
+ 12,
29
+ 24
30
+ ],
31
+ "conditions": [
32
+ "untrained",
33
+ "paired",
34
+ "unpaired",
35
+ "dan_silenced",
36
+ "dan_acquisition",
37
+ "dan_consolidation"
38
+ ],
39
+ "models": [
40
+ "consolidating",
41
+ "decay_only"
42
+ ],
43
+ "learning_dan_dependence": false,
44
+ "calibration_delays_h": [
45
+ 0.5,
46
+ 24
47
+ ],
48
+ "prediction_delays_h": [
49
+ 3,
50
+ 6,
51
+ 12
52
+ ],
53
+ "motor_value_gain": 4.0,
54
+ "innate_value": 0.15,
55
+ "test_duration_s": 120.0,
56
+ "physics_dt_s": 0.0001,
57
+ "control_dt_s": 0.02,
58
+ "base_drive": 1,
59
+ "max_turn": 0.6,
60
+ "turn_gain": 120.0,
61
+ "motor_noise_sd": 0.18,
62
+ "source_x_mm": 19,
63
+ "source_y_mm": 9,
64
+ "odor_length_mm": 40.0,
65
+ "choice_x_mm": 12,
66
+ "choice_abs_y_mm": 2.5,
67
+ "odor_noise_sd": 0.0008,
68
+ "video_fps": 25,
69
+ "protocol": "paper_paired",
70
+ "center_motor_readout": true,
71
+ "adaptation_epsilon": 0.01,
72
+ "motor_denominator_floor": 0.05,
73
+ "stem_mm": 30.0,
74
+ "arm_mm": 60.0,
75
+ "corridor_width_mm": 10.0,
76
+ "collection_depth_mm": 8.0,
77
+ "capture_policy": "absorbing collection region; approximation to collection vials",
78
+ "readout": "functional concentration-normalized population contrast",
79
+ "fitted_delays_h": [
80
+ 0.5,
81
+ 24.0
82
+ ],
83
+ "held_out_delays_h": [
84
+ 3.0,
85
+ 6.0,
86
+ 12.0,
87
+ 15.0,
88
+ 48.0
89
+ ],
90
+ "individual_controller_v4": true,
91
+ "behavioral_gain": 50.0,
92
+ "gait_seed": 2968184368
93
+ },
94
+ "phenotype": {
95
+ "gait_seed": 2968184368,
96
+ "sensory_seed": 4247063429,
97
+ "motor_seed": 3043873484,
98
+ "heading_seed": 3978850561,
99
+ "motor_noise_sd": 0.18666141885702353
100
+ },
101
+ "learning_gain": 1.0749638352227273,
102
+ "seed": 698266775
103
+ }
raw/v4b/validation/untrained/0.5h/rep00_odor1_side0/learning_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:53d99014ae4d1bc94b9517158538a1e85cca02761cc627b400571193674d7eda
3
+ size 10674
raw/v4b/validation/untrained/0.5h/rep00_odor1_side0/learning_states.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e106b4d74fd1d0d5889ba3ad646a44443b6fc2bc768f6f12ec7651c01748f8ee
3
+ size 18116
raw/v4b/validation/untrained/0.5h/rep00_odor1_side0/physics_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:8d2de78ec7afc26c2496212f8978e83c6b150c75d7fc24254c58056b292f08b3
3
+ size 2417125
raw/v4b/validation/untrained/0.5h/rep00_odor1_side0/replay.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:2e0ec953da837ed2901dcc2ce8c467070a91dc060489929865df1b386c77a108
3
+ size 82119
raw/v4b/validation/untrained/0.5h/rep00_odor1_side0/state_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:5c9f3c5372175f94e4481687806d941472f7b717437bc417b5a53050120590e4
3
+ size 157919
raw/v4b/validation/untrained/0.5h/rep00_odor1_side0/summary.json ADDED
@@ -0,0 +1,29 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "model": "consolidating",
3
+ "condition": "untrained",
4
+ "delay_h": 0.5,
5
+ "replicate": 0,
6
+ "paired_odor": "B",
7
+ "b_left": false,
8
+ "fly_id": "consolidating_untrained_0.5h_0_1_0",
9
+ "gait_seed": 2968184368,
10
+ "sensory_seed": 4247063429,
11
+ "motor_seed": 3043873484,
12
+ "heading_seed": 3978850561,
13
+ "motor_noise_sd": 0.18666141885702353,
14
+ "seed": 698266775,
15
+ "learning_gain": 1.0749638352227273,
16
+ "choice": "A",
17
+ "choice_latency_s": 5.7417,
18
+ "termination": "test_window_complete",
19
+ "score": -1,
20
+ "neural_value_difference": 0.0,
21
+ "physics_ticks": 57417,
22
+ "control_rows": 6000,
23
+ "assay_duration_s": 120.0,
24
+ "test_start_biological_s": 11400.0,
25
+ "captured": true,
26
+ "physical_time_s": 5.741700000000001,
27
+ "capture_policy": "absorbing collection region; approximation to collection vials",
28
+ "diagnostic": false
29
+ }
raw/v4b/validation/untrained/0.5h/rep00_odor1_side1/individual_configuration.json ADDED
@@ -0,0 +1,103 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "config": {
3
+ "schema_version": 1,
4
+ "dataset": "FlyWire FAFB v783",
5
+ "master_seed": 920618,
6
+ "odor_encoding_seed": 7331,
7
+ "min_pair_synapses": 5,
8
+ "kc_threshold": 0.15,
9
+ "kc_sparsity_quantile": 0.85,
10
+ "odor_sparsity": 0.2,
11
+ "acquisition_per_s": 0.0015,
12
+ "aversive_tau_h": 4.0,
13
+ "consolidation_tau_h": 12.0,
14
+ "long_memory_tau_h": 168,
15
+ "appetitive_scale": 1,
16
+ "aversive_scale": 1.0,
17
+ "decay_only_appetitive_scale": 0.35,
18
+ "ethanol_uptake_tau_s": 120,
19
+ "ethanol_clearance_tau_s": 300,
20
+ "training_exposure_s": 600,
21
+ "training_interval_s": 3000,
22
+ "conditioning_sessions": 3,
23
+ "biological_step_s": 60,
24
+ "delays_h": [
25
+ 0.5,
26
+ 3,
27
+ 6,
28
+ 12,
29
+ 24
30
+ ],
31
+ "conditions": [
32
+ "untrained",
33
+ "paired",
34
+ "unpaired",
35
+ "dan_silenced",
36
+ "dan_acquisition",
37
+ "dan_consolidation"
38
+ ],
39
+ "models": [
40
+ "consolidating",
41
+ "decay_only"
42
+ ],
43
+ "learning_dan_dependence": false,
44
+ "calibration_delays_h": [
45
+ 0.5,
46
+ 24
47
+ ],
48
+ "prediction_delays_h": [
49
+ 3,
50
+ 6,
51
+ 12
52
+ ],
53
+ "motor_value_gain": 4.0,
54
+ "innate_value": 0.15,
55
+ "test_duration_s": 120.0,
56
+ "physics_dt_s": 0.0001,
57
+ "control_dt_s": 0.02,
58
+ "base_drive": 1,
59
+ "max_turn": 0.6,
60
+ "turn_gain": 120.0,
61
+ "motor_noise_sd": 0.18,
62
+ "source_x_mm": 19,
63
+ "source_y_mm": 9,
64
+ "odor_length_mm": 40.0,
65
+ "choice_x_mm": 12,
66
+ "choice_abs_y_mm": 2.5,
67
+ "odor_noise_sd": 0.0008,
68
+ "video_fps": 25,
69
+ "protocol": "paper_paired",
70
+ "center_motor_readout": true,
71
+ "adaptation_epsilon": 0.01,
72
+ "motor_denominator_floor": 0.05,
73
+ "stem_mm": 30.0,
74
+ "arm_mm": 60.0,
75
+ "corridor_width_mm": 10.0,
76
+ "collection_depth_mm": 8.0,
77
+ "capture_policy": "absorbing collection region; approximation to collection vials",
78
+ "readout": "functional concentration-normalized population contrast",
79
+ "fitted_delays_h": [
80
+ 0.5,
81
+ 24.0
82
+ ],
83
+ "held_out_delays_h": [
84
+ 3.0,
85
+ 6.0,
86
+ 12.0,
87
+ 15.0,
88
+ 48.0
89
+ ],
90
+ "individual_controller_v4": true,
91
+ "behavioral_gain": 50.0,
92
+ "gait_seed": 494664963
93
+ },
94
+ "phenotype": {
95
+ "gait_seed": 494664963,
96
+ "sensory_seed": 2377024065,
97
+ "motor_seed": 2318439405,
98
+ "heading_seed": 3053856523,
99
+ "motor_noise_sd": 0.12606474305310353
100
+ },
101
+ "learning_gain": 1.1583922143982963,
102
+ "seed": 3080033903
103
+ }
raw/v4b/validation/untrained/0.5h/rep00_odor1_side1/learning_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:53d99014ae4d1bc94b9517158538a1e85cca02761cc627b400571193674d7eda
3
+ size 10674
raw/v4b/validation/untrained/0.5h/rep00_odor1_side1/learning_states.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e106b4d74fd1d0d5889ba3ad646a44443b6fc2bc768f6f12ec7651c01748f8ee
3
+ size 18116
raw/v4b/validation/untrained/0.5h/rep00_odor1_side1/physics_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ed00544b5d39b8323558f54d189ded9e847ebb68b9f2902c319ea61b645526d4
3
+ size 2493012
raw/v4b/validation/untrained/0.5h/rep00_odor1_side1/replay.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:bfc8e8e87155d5f95a34330e89efbebb2f150ff9e0b1824229a6403a76ce209a
3
+ size 84923
raw/v4b/validation/untrained/0.5h/rep00_odor1_side1/state_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:340e43fee332dbb9b218ca800cf78e210ea41c1c3042ba8dad074e01d03a147c
3
+ size 159626
raw/v4b/validation/untrained/0.5h/rep00_odor1_side1/summary.json ADDED
@@ -0,0 +1,29 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "model": "consolidating",
3
+ "condition": "untrained",
4
+ "delay_h": 0.5,
5
+ "replicate": 0,
6
+ "paired_odor": "B",
7
+ "b_left": true,
8
+ "fly_id": "consolidating_untrained_0.5h_0_1_1",
9
+ "gait_seed": 494664963,
10
+ "sensory_seed": 2377024065,
11
+ "motor_seed": 2318439405,
12
+ "heading_seed": 3053856523,
13
+ "motor_noise_sd": 0.12606474305310353,
14
+ "seed": 3080033903,
15
+ "learning_gain": 1.1583922143982963,
16
+ "choice": "A",
17
+ "choice_latency_s": 5.9225,
18
+ "termination": "test_window_complete",
19
+ "score": -1,
20
+ "neural_value_difference": 0.0,
21
+ "physics_ticks": 59225,
22
+ "control_rows": 6000,
23
+ "assay_duration_s": 120.0,
24
+ "test_start_biological_s": 11400.0,
25
+ "captured": true,
26
+ "physical_time_s": 5.9225,
27
+ "capture_policy": "absorbing collection region; approximation to collection vials",
28
+ "diagnostic": false
29
+ }
raw/v4b/validation/untrained/0.5h/rep01_odor0_side0/individual_configuration.json ADDED
@@ -0,0 +1,103 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "config": {
3
+ "schema_version": 1,
4
+ "dataset": "FlyWire FAFB v783",
5
+ "master_seed": 920618,
6
+ "odor_encoding_seed": 7331,
7
+ "min_pair_synapses": 5,
8
+ "kc_threshold": 0.15,
9
+ "kc_sparsity_quantile": 0.85,
10
+ "odor_sparsity": 0.2,
11
+ "acquisition_per_s": 0.0015,
12
+ "aversive_tau_h": 4.0,
13
+ "consolidation_tau_h": 12.0,
14
+ "long_memory_tau_h": 168,
15
+ "appetitive_scale": 1,
16
+ "aversive_scale": 1.0,
17
+ "decay_only_appetitive_scale": 0.35,
18
+ "ethanol_uptake_tau_s": 120,
19
+ "ethanol_clearance_tau_s": 300,
20
+ "training_exposure_s": 600,
21
+ "training_interval_s": 3000,
22
+ "conditioning_sessions": 3,
23
+ "biological_step_s": 60,
24
+ "delays_h": [
25
+ 0.5,
26
+ 3,
27
+ 6,
28
+ 12,
29
+ 24
30
+ ],
31
+ "conditions": [
32
+ "untrained",
33
+ "paired",
34
+ "unpaired",
35
+ "dan_silenced",
36
+ "dan_acquisition",
37
+ "dan_consolidation"
38
+ ],
39
+ "models": [
40
+ "consolidating",
41
+ "decay_only"
42
+ ],
43
+ "learning_dan_dependence": false,
44
+ "calibration_delays_h": [
45
+ 0.5,
46
+ 24
47
+ ],
48
+ "prediction_delays_h": [
49
+ 3,
50
+ 6,
51
+ 12
52
+ ],
53
+ "motor_value_gain": 4.0,
54
+ "innate_value": 0.15,
55
+ "test_duration_s": 120.0,
56
+ "physics_dt_s": 0.0001,
57
+ "control_dt_s": 0.02,
58
+ "base_drive": 1,
59
+ "max_turn": 0.6,
60
+ "turn_gain": 120.0,
61
+ "motor_noise_sd": 0.18,
62
+ "source_x_mm": 19,
63
+ "source_y_mm": 9,
64
+ "odor_length_mm": 40.0,
65
+ "choice_x_mm": 12,
66
+ "choice_abs_y_mm": 2.5,
67
+ "odor_noise_sd": 0.0008,
68
+ "video_fps": 25,
69
+ "protocol": "paper_paired",
70
+ "center_motor_readout": true,
71
+ "adaptation_epsilon": 0.01,
72
+ "motor_denominator_floor": 0.05,
73
+ "stem_mm": 30.0,
74
+ "arm_mm": 60.0,
75
+ "corridor_width_mm": 10.0,
76
+ "collection_depth_mm": 8.0,
77
+ "capture_policy": "absorbing collection region; approximation to collection vials",
78
+ "readout": "functional concentration-normalized population contrast",
79
+ "fitted_delays_h": [
80
+ 0.5,
81
+ 24.0
82
+ ],
83
+ "held_out_delays_h": [
84
+ 3.0,
85
+ 6.0,
86
+ 12.0,
87
+ 15.0,
88
+ 48.0
89
+ ],
90
+ "individual_controller_v4": true,
91
+ "behavioral_gain": 50.0,
92
+ "gait_seed": 3146874483
93
+ },
94
+ "phenotype": {
95
+ "gait_seed": 3146874483,
96
+ "sensory_seed": 3854688066,
97
+ "motor_seed": 1732701990,
98
+ "heading_seed": 1129030778,
99
+ "motor_noise_sd": 0.1623124832513566
100
+ },
101
+ "learning_gain": 1.0795536330666946,
102
+ "seed": 723520781
103
+ }
raw/v4b/validation/untrained/0.5h/rep01_odor0_side0/learning_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:53d99014ae4d1bc94b9517158538a1e85cca02761cc627b400571193674d7eda
3
+ size 10674
raw/v4b/validation/untrained/0.5h/rep01_odor0_side0/learning_states.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e106b4d74fd1d0d5889ba3ad646a44443b6fc2bc768f6f12ec7651c01748f8ee
3
+ size 18116
raw/v4b/validation/untrained/0.5h/rep01_odor0_side0/physics_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:b9b7fc2fdd6bbae7417ade999d461f42938d5a31faa22808a2bb45554cf9193c
3
+ size 2450740
raw/v4b/validation/untrained/0.5h/rep01_odor0_side0/replay.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:031ff58893ae1942e7d365fbc340b7a92c9a49404c899eb84d8a285a720db9b3
3
+ size 83256
raw/v4b/validation/untrained/0.5h/rep01_odor0_side0/state_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:2937a9a09c327cc259c7d098acb1c358a9c0b58ca61ccd3f7cbf407bb8600e81
3
+ size 158614
raw/v4b/validation/untrained/0.5h/rep01_odor0_side0/summary.json ADDED
@@ -0,0 +1,29 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "model": "consolidating",
3
+ "condition": "untrained",
4
+ "delay_h": 0.5,
5
+ "replicate": 1,
6
+ "paired_odor": "A",
7
+ "b_left": false,
8
+ "fly_id": "consolidating_untrained_0.5h_1_0_0",
9
+ "gait_seed": 3146874483,
10
+ "sensory_seed": 3854688066,
11
+ "motor_seed": 1732701990,
12
+ "heading_seed": 1129030778,
13
+ "motor_noise_sd": 0.1623124832513566,
14
+ "seed": 723520781,
15
+ "learning_gain": 1.0795536330666946,
16
+ "choice": "B",
17
+ "choice_latency_s": 5.8174,
18
+ "termination": "test_window_complete",
19
+ "score": -1,
20
+ "neural_value_difference": 0.0,
21
+ "physics_ticks": 58174,
22
+ "control_rows": 6000,
23
+ "assay_duration_s": 120.0,
24
+ "test_start_biological_s": 11400.0,
25
+ "captured": true,
26
+ "physical_time_s": 5.8174,
27
+ "capture_policy": "absorbing collection region; approximation to collection vials",
28
+ "diagnostic": false
29
+ }
raw/v4b/validation/untrained/0.5h/rep01_odor0_side1/individual_configuration.json ADDED
@@ -0,0 +1,103 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "config": {
3
+ "schema_version": 1,
4
+ "dataset": "FlyWire FAFB v783",
5
+ "master_seed": 920618,
6
+ "odor_encoding_seed": 7331,
7
+ "min_pair_synapses": 5,
8
+ "kc_threshold": 0.15,
9
+ "kc_sparsity_quantile": 0.85,
10
+ "odor_sparsity": 0.2,
11
+ "acquisition_per_s": 0.0015,
12
+ "aversive_tau_h": 4.0,
13
+ "consolidation_tau_h": 12.0,
14
+ "long_memory_tau_h": 168,
15
+ "appetitive_scale": 1,
16
+ "aversive_scale": 1.0,
17
+ "decay_only_appetitive_scale": 0.35,
18
+ "ethanol_uptake_tau_s": 120,
19
+ "ethanol_clearance_tau_s": 300,
20
+ "training_exposure_s": 600,
21
+ "training_interval_s": 3000,
22
+ "conditioning_sessions": 3,
23
+ "biological_step_s": 60,
24
+ "delays_h": [
25
+ 0.5,
26
+ 3,
27
+ 6,
28
+ 12,
29
+ 24
30
+ ],
31
+ "conditions": [
32
+ "untrained",
33
+ "paired",
34
+ "unpaired",
35
+ "dan_silenced",
36
+ "dan_acquisition",
37
+ "dan_consolidation"
38
+ ],
39
+ "models": [
40
+ "consolidating",
41
+ "decay_only"
42
+ ],
43
+ "learning_dan_dependence": false,
44
+ "calibration_delays_h": [
45
+ 0.5,
46
+ 24
47
+ ],
48
+ "prediction_delays_h": [
49
+ 3,
50
+ 6,
51
+ 12
52
+ ],
53
+ "motor_value_gain": 4.0,
54
+ "innate_value": 0.15,
55
+ "test_duration_s": 120.0,
56
+ "physics_dt_s": 0.0001,
57
+ "control_dt_s": 0.02,
58
+ "base_drive": 1,
59
+ "max_turn": 0.6,
60
+ "turn_gain": 120.0,
61
+ "motor_noise_sd": 0.18,
62
+ "source_x_mm": 19,
63
+ "source_y_mm": 9,
64
+ "odor_length_mm": 40.0,
65
+ "choice_x_mm": 12,
66
+ "choice_abs_y_mm": 2.5,
67
+ "odor_noise_sd": 0.0008,
68
+ "video_fps": 25,
69
+ "protocol": "paper_paired",
70
+ "center_motor_readout": true,
71
+ "adaptation_epsilon": 0.01,
72
+ "motor_denominator_floor": 0.05,
73
+ "stem_mm": 30.0,
74
+ "arm_mm": 60.0,
75
+ "corridor_width_mm": 10.0,
76
+ "collection_depth_mm": 8.0,
77
+ "capture_policy": "absorbing collection region; approximation to collection vials",
78
+ "readout": "functional concentration-normalized population contrast",
79
+ "fitted_delays_h": [
80
+ 0.5,
81
+ 24.0
82
+ ],
83
+ "held_out_delays_h": [
84
+ 3.0,
85
+ 6.0,
86
+ 12.0,
87
+ 15.0,
88
+ 48.0
89
+ ],
90
+ "individual_controller_v4": true,
91
+ "behavioral_gain": 50.0,
92
+ "gait_seed": 3511359265
93
+ },
94
+ "phenotype": {
95
+ "gait_seed": 3511359265,
96
+ "sensory_seed": 3252734347,
97
+ "motor_seed": 2325131278,
98
+ "heading_seed": 559924758,
99
+ "motor_noise_sd": 0.1907564239844831
100
+ },
101
+ "learning_gain": 0.8761544115291213,
102
+ "seed": 14992169
103
+ }
raw/v4b/validation/untrained/0.5h/rep01_odor0_side1/learning_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:53d99014ae4d1bc94b9517158538a1e85cca02761cc627b400571193674d7eda
3
+ size 10674