Histochemichael commited on
Commit
996fa13
·
verified ·
1 Parent(s): 03b640b

Preserve remaining raw simulation records batch 11

Browse files
Files changed (28) hide show
  1. raw/v4b/validation/unpaired/24h/rep02_odor0_side1/learning_states.npz +3 -0
  2. raw/v4b/validation/unpaired/24h/rep02_odor0_side1/physics_history.parquet +3 -0
  3. raw/v4b/validation/unpaired/24h/rep02_odor0_side1/replay.npz +3 -0
  4. raw/v4b/validation/unpaired/24h/rep02_odor0_side1/state_history.parquet +3 -0
  5. raw/v4b/validation/unpaired/24h/rep02_odor0_side1/summary.json +29 -0
  6. raw/v4b/validation/unpaired/24h/rep02_odor1_side0/individual_configuration.json +103 -0
  7. raw/v4b/validation/unpaired/24h/rep02_odor1_side0/learning_history.parquet +3 -0
  8. raw/v4b/validation/unpaired/24h/rep02_odor1_side0/learning_states.npz +3 -0
  9. raw/v4b/validation/unpaired/24h/rep02_odor1_side0/physics_history.parquet +3 -0
  10. raw/v4b/validation/unpaired/24h/rep02_odor1_side0/replay.npz +3 -0
  11. raw/v4b/validation/unpaired/24h/rep02_odor1_side0/state_history.parquet +3 -0
  12. raw/v4b/validation/unpaired/24h/rep02_odor1_side0/summary.json +29 -0
  13. raw/v4b/validation/unpaired/24h/rep02_odor1_side1/individual_configuration.json +103 -0
  14. raw/v4b/validation/unpaired/24h/rep02_odor1_side1/learning_history.parquet +3 -0
  15. raw/v4b/validation/unpaired/24h/rep02_odor1_side1/learning_states.npz +3 -0
  16. raw/v4b/validation/unpaired/24h/rep02_odor1_side1/physics_history.parquet +3 -0
  17. raw/v4b/validation/unpaired/24h/rep02_odor1_side1/replay.npz +3 -0
  18. raw/v4b/validation/unpaired/24h/rep02_odor1_side1/state_history.parquet +3 -0
  19. raw/v4b/validation/unpaired/24h/rep02_odor1_side1/summary.json +29 -0
  20. raw/v4b/validation/unpaired/24h/rep03_odor0_side0/individual_configuration.json +103 -0
  21. raw/v4b/validation/unpaired/24h/rep03_odor0_side0/learning_history.parquet +3 -0
  22. raw/v4b/validation/unpaired/24h/rep03_odor0_side0/learning_states.npz +3 -0
  23. raw/v4b/validation/unpaired/24h/rep03_odor0_side0/physics_history.parquet +3 -0
  24. raw/v4b/validation/unpaired/24h/rep03_odor0_side0/replay.npz +3 -0
  25. raw/v4b/validation/unpaired/24h/rep03_odor0_side0/state_history.parquet +3 -0
  26. raw/v4b/validation/unpaired/24h/rep03_odor0_side0/summary.json +29 -0
  27. raw/v4b/validation/unpaired/24h/rep03_odor0_side1/individual_configuration.json +103 -0
  28. raw/v4b/validation/unpaired/24h/rep03_odor0_side1/learning_history.parquet +3 -0
raw/v4b/validation/unpaired/24h/rep02_odor0_side1/learning_states.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:880fe7bdf8ec3c1b4c10e7a6e455746c68d3de2d53559fc54adc1afad2f78d01
3
+ size 133478
raw/v4b/validation/unpaired/24h/rep02_odor0_side1/physics_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:d447582da1945fc2108e11cf9f0fd4d1f762025aadf2b2c69dbeb9219d644a7a
3
+ size 2449769
raw/v4b/validation/unpaired/24h/rep02_odor0_side1/replay.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:634df328292bec8452bf1b3a2b9260058fb31d1cdac12ddb03d36e9ffd11e0d6
3
+ size 83245
raw/v4b/validation/unpaired/24h/rep02_odor0_side1/state_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:f99bd19ace0d6a127ff1134789b2e018a53ed4c112d1dd8e77d03436006fa97d
3
+ size 369602
raw/v4b/validation/unpaired/24h/rep02_odor0_side1/summary.json ADDED
@@ -0,0 +1,29 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "model": "consolidating",
3
+ "condition": "unpaired",
4
+ "delay_h": 24.0,
5
+ "replicate": 2,
6
+ "paired_odor": "A",
7
+ "b_left": true,
8
+ "fly_id": "consolidating_unpaired_24h_2_0_1",
9
+ "gait_seed": 2075985256,
10
+ "sensory_seed": 1181218636,
11
+ "motor_seed": 4001456747,
12
+ "heading_seed": 3554770371,
13
+ "motor_noise_sd": 0.17879200236542642,
14
+ "seed": 3790510634,
15
+ "learning_gain": 0.6167633743058852,
16
+ "choice": "B",
17
+ "choice_latency_s": 5.8184,
18
+ "termination": "test_window_complete",
19
+ "score": -1,
20
+ "neural_value_difference": -0.0009154627800737231,
21
+ "physics_ticks": 58184,
22
+ "control_rows": 6000,
23
+ "assay_duration_s": 120.0,
24
+ "test_start_biological_s": 96000.0,
25
+ "captured": true,
26
+ "physical_time_s": 5.8184000000000005,
27
+ "capture_policy": "absorbing collection region; approximation to collection vials",
28
+ "diagnostic": false
29
+ }
raw/v4b/validation/unpaired/24h/rep02_odor1_side0/individual_configuration.json ADDED
@@ -0,0 +1,103 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "config": {
3
+ "schema_version": 1,
4
+ "dataset": "FlyWire FAFB v783",
5
+ "master_seed": 920618,
6
+ "odor_encoding_seed": 7331,
7
+ "min_pair_synapses": 5,
8
+ "kc_threshold": 0.15,
9
+ "kc_sparsity_quantile": 0.85,
10
+ "odor_sparsity": 0.2,
11
+ "acquisition_per_s": 0.0015,
12
+ "aversive_tau_h": 4.0,
13
+ "consolidation_tau_h": 12.0,
14
+ "long_memory_tau_h": 168,
15
+ "appetitive_scale": 1,
16
+ "aversive_scale": 1.0,
17
+ "decay_only_appetitive_scale": 0.35,
18
+ "ethanol_uptake_tau_s": 120,
19
+ "ethanol_clearance_tau_s": 300,
20
+ "training_exposure_s": 600,
21
+ "training_interval_s": 3000,
22
+ "conditioning_sessions": 3,
23
+ "biological_step_s": 60,
24
+ "delays_h": [
25
+ 0.5,
26
+ 3,
27
+ 6,
28
+ 12,
29
+ 24
30
+ ],
31
+ "conditions": [
32
+ "untrained",
33
+ "paired",
34
+ "unpaired",
35
+ "dan_silenced",
36
+ "dan_acquisition",
37
+ "dan_consolidation"
38
+ ],
39
+ "models": [
40
+ "consolidating",
41
+ "decay_only"
42
+ ],
43
+ "learning_dan_dependence": false,
44
+ "calibration_delays_h": [
45
+ 0.5,
46
+ 24
47
+ ],
48
+ "prediction_delays_h": [
49
+ 3,
50
+ 6,
51
+ 12
52
+ ],
53
+ "motor_value_gain": 4.0,
54
+ "innate_value": 0.15,
55
+ "test_duration_s": 120.0,
56
+ "physics_dt_s": 0.0001,
57
+ "control_dt_s": 0.02,
58
+ "base_drive": 1,
59
+ "max_turn": 0.6,
60
+ "turn_gain": 120.0,
61
+ "motor_noise_sd": 0.18,
62
+ "source_x_mm": 19,
63
+ "source_y_mm": 9,
64
+ "odor_length_mm": 40.0,
65
+ "choice_x_mm": 12,
66
+ "choice_abs_y_mm": 2.5,
67
+ "odor_noise_sd": 0.0008,
68
+ "video_fps": 25,
69
+ "protocol": "paper_paired",
70
+ "center_motor_readout": true,
71
+ "adaptation_epsilon": 0.01,
72
+ "motor_denominator_floor": 0.05,
73
+ "stem_mm": 30.0,
74
+ "arm_mm": 60.0,
75
+ "corridor_width_mm": 10.0,
76
+ "collection_depth_mm": 8.0,
77
+ "capture_policy": "absorbing collection region; approximation to collection vials",
78
+ "readout": "functional concentration-normalized population contrast",
79
+ "fitted_delays_h": [
80
+ 0.5,
81
+ 24.0
82
+ ],
83
+ "held_out_delays_h": [
84
+ 3.0,
85
+ 6.0,
86
+ 12.0,
87
+ 15.0,
88
+ 48.0
89
+ ],
90
+ "individual_controller_v4": true,
91
+ "behavioral_gain": 50.0,
92
+ "gait_seed": 2110062021
93
+ },
94
+ "phenotype": {
95
+ "gait_seed": 2110062021,
96
+ "sensory_seed": 2035589812,
97
+ "motor_seed": 1845140329,
98
+ "heading_seed": 1111854695,
99
+ "motor_noise_sd": 0.12634049334524888
100
+ },
101
+ "learning_gain": 1.1725202770096583,
102
+ "seed": 54814740
103
+ }
raw/v4b/validation/unpaired/24h/rep02_odor1_side0/learning_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:52432f04af6849497a6717a82e7722a72a9f7627e950a1c7745b610fd65fb1da
3
+ size 8106887
raw/v4b/validation/unpaired/24h/rep02_odor1_side0/learning_states.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:2f338961f0adf4665947a0accc378c3d7825680969982b730c5c59d368bec195
3
+ size 133503
raw/v4b/validation/unpaired/24h/rep02_odor1_side0/physics_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:f8b3f99d949a73c340bd98799539c84de45dfa0dabc9e35644f667e358f965d4
3
+ size 2481331
raw/v4b/validation/unpaired/24h/rep02_odor1_side0/replay.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:f6d2974662392fecf941adbb09f58259dc58b66c49630fda59efdb9501696a6f
3
+ size 84382
raw/v4b/validation/unpaired/24h/rep02_odor1_side0/state_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:7cc9f53e93b7101388931cb2376f5a873b9a160c51fb57a659c6786ef11b3173
3
+ size 370548
raw/v4b/validation/unpaired/24h/rep02_odor1_side0/summary.json ADDED
@@ -0,0 +1,29 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "model": "consolidating",
3
+ "condition": "unpaired",
4
+ "delay_h": 24.0,
5
+ "replicate": 2,
6
+ "paired_odor": "B",
7
+ "b_left": false,
8
+ "fly_id": "consolidating_unpaired_24h_2_1_0",
9
+ "gait_seed": 2110062021,
10
+ "sensory_seed": 2035589812,
11
+ "motor_seed": 1845140329,
12
+ "heading_seed": 1111854695,
13
+ "motor_noise_sd": 0.12634049334524888,
14
+ "seed": 54814740,
15
+ "learning_gain": 1.1725202770096583,
16
+ "choice": "A",
17
+ "choice_latency_s": 5.891,
18
+ "termination": "test_window_complete",
19
+ "score": -1,
20
+ "neural_value_difference": -0.0015291712929903346,
21
+ "physics_ticks": 58910,
22
+ "control_rows": 6000,
23
+ "assay_duration_s": 120.0,
24
+ "test_start_biological_s": 96000.0,
25
+ "captured": true,
26
+ "physical_time_s": 5.891,
27
+ "capture_policy": "absorbing collection region; approximation to collection vials",
28
+ "diagnostic": false
29
+ }
raw/v4b/validation/unpaired/24h/rep02_odor1_side1/individual_configuration.json ADDED
@@ -0,0 +1,103 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "config": {
3
+ "schema_version": 1,
4
+ "dataset": "FlyWire FAFB v783",
5
+ "master_seed": 920618,
6
+ "odor_encoding_seed": 7331,
7
+ "min_pair_synapses": 5,
8
+ "kc_threshold": 0.15,
9
+ "kc_sparsity_quantile": 0.85,
10
+ "odor_sparsity": 0.2,
11
+ "acquisition_per_s": 0.0015,
12
+ "aversive_tau_h": 4.0,
13
+ "consolidation_tau_h": 12.0,
14
+ "long_memory_tau_h": 168,
15
+ "appetitive_scale": 1,
16
+ "aversive_scale": 1.0,
17
+ "decay_only_appetitive_scale": 0.35,
18
+ "ethanol_uptake_tau_s": 120,
19
+ "ethanol_clearance_tau_s": 300,
20
+ "training_exposure_s": 600,
21
+ "training_interval_s": 3000,
22
+ "conditioning_sessions": 3,
23
+ "biological_step_s": 60,
24
+ "delays_h": [
25
+ 0.5,
26
+ 3,
27
+ 6,
28
+ 12,
29
+ 24
30
+ ],
31
+ "conditions": [
32
+ "untrained",
33
+ "paired",
34
+ "unpaired",
35
+ "dan_silenced",
36
+ "dan_acquisition",
37
+ "dan_consolidation"
38
+ ],
39
+ "models": [
40
+ "consolidating",
41
+ "decay_only"
42
+ ],
43
+ "learning_dan_dependence": false,
44
+ "calibration_delays_h": [
45
+ 0.5,
46
+ 24
47
+ ],
48
+ "prediction_delays_h": [
49
+ 3,
50
+ 6,
51
+ 12
52
+ ],
53
+ "motor_value_gain": 4.0,
54
+ "innate_value": 0.15,
55
+ "test_duration_s": 120.0,
56
+ "physics_dt_s": 0.0001,
57
+ "control_dt_s": 0.02,
58
+ "base_drive": 1,
59
+ "max_turn": 0.6,
60
+ "turn_gain": 120.0,
61
+ "motor_noise_sd": 0.18,
62
+ "source_x_mm": 19,
63
+ "source_y_mm": 9,
64
+ "odor_length_mm": 40.0,
65
+ "choice_x_mm": 12,
66
+ "choice_abs_y_mm": 2.5,
67
+ "odor_noise_sd": 0.0008,
68
+ "video_fps": 25,
69
+ "protocol": "paper_paired",
70
+ "center_motor_readout": true,
71
+ "adaptation_epsilon": 0.01,
72
+ "motor_denominator_floor": 0.05,
73
+ "stem_mm": 30.0,
74
+ "arm_mm": 60.0,
75
+ "corridor_width_mm": 10.0,
76
+ "collection_depth_mm": 8.0,
77
+ "capture_policy": "absorbing collection region; approximation to collection vials",
78
+ "readout": "functional concentration-normalized population contrast",
79
+ "fitted_delays_h": [
80
+ 0.5,
81
+ 24.0
82
+ ],
83
+ "held_out_delays_h": [
84
+ 3.0,
85
+ 6.0,
86
+ 12.0,
87
+ 15.0,
88
+ 48.0
89
+ ],
90
+ "individual_controller_v4": true,
91
+ "behavioral_gain": 50.0,
92
+ "gait_seed": 4090498433
93
+ },
94
+ "phenotype": {
95
+ "gait_seed": 4090498433,
96
+ "sensory_seed": 2307932928,
97
+ "motor_seed": 3136183145,
98
+ "heading_seed": 3711526567,
99
+ "motor_noise_sd": 0.2087142680741625
100
+ },
101
+ "learning_gain": 1.1880598812721808,
102
+ "seed": 4055109185
103
+ }
raw/v4b/validation/unpaired/24h/rep02_odor1_side1/learning_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:890842e1323a50973be8507cf421516b014f80ce968d97449a118539fff705b6
3
+ size 8100047
raw/v4b/validation/unpaired/24h/rep02_odor1_side1/learning_states.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:9693e6ec473ebfae6c2c72fafe9d57ee4a402230d900ee2333bf817aadb6639c
3
+ size 133490
raw/v4b/validation/unpaired/24h/rep02_odor1_side1/physics_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:9b0256412890fc2e273009dcc3237c6db1c3545e17d9e7976e09334716f9f1c4
3
+ size 2458189
raw/v4b/validation/unpaired/24h/rep02_odor1_side1/replay.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:c0d5bfa818c7cba2c38728387281cecbed2a0a6e1eca7677a1bdb961fde0feb5
3
+ size 83276
raw/v4b/validation/unpaired/24h/rep02_odor1_side1/state_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:a715ac747ad87e1f826da6aa03c05b6fad06cbcc69fe2500d0bcc9c8d20f548e
3
+ size 369525
raw/v4b/validation/unpaired/24h/rep02_odor1_side1/summary.json ADDED
@@ -0,0 +1,29 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "model": "consolidating",
3
+ "condition": "unpaired",
4
+ "delay_h": 24.0,
5
+ "replicate": 2,
6
+ "paired_odor": "B",
7
+ "b_left": true,
8
+ "fly_id": "consolidating_unpaired_24h_2_1_1",
9
+ "gait_seed": 4090498433,
10
+ "sensory_seed": 2307932928,
11
+ "motor_seed": 3136183145,
12
+ "heading_seed": 3711526567,
13
+ "motor_noise_sd": 0.2087142680741625,
14
+ "seed": 4055109185,
15
+ "learning_gain": 1.1880598812721808,
16
+ "choice": "B",
17
+ "choice_latency_s": 5.8337,
18
+ "termination": "test_window_complete",
19
+ "score": 1,
20
+ "neural_value_difference": -0.001549401509681658,
21
+ "physics_ticks": 58337,
22
+ "control_rows": 6000,
23
+ "assay_duration_s": 120.0,
24
+ "test_start_biological_s": 96000.0,
25
+ "captured": true,
26
+ "physical_time_s": 5.8337,
27
+ "capture_policy": "absorbing collection region; approximation to collection vials",
28
+ "diagnostic": false
29
+ }
raw/v4b/validation/unpaired/24h/rep03_odor0_side0/individual_configuration.json ADDED
@@ -0,0 +1,103 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "config": {
3
+ "schema_version": 1,
4
+ "dataset": "FlyWire FAFB v783",
5
+ "master_seed": 920618,
6
+ "odor_encoding_seed": 7331,
7
+ "min_pair_synapses": 5,
8
+ "kc_threshold": 0.15,
9
+ "kc_sparsity_quantile": 0.85,
10
+ "odor_sparsity": 0.2,
11
+ "acquisition_per_s": 0.0015,
12
+ "aversive_tau_h": 4.0,
13
+ "consolidation_tau_h": 12.0,
14
+ "long_memory_tau_h": 168,
15
+ "appetitive_scale": 1,
16
+ "aversive_scale": 1.0,
17
+ "decay_only_appetitive_scale": 0.35,
18
+ "ethanol_uptake_tau_s": 120,
19
+ "ethanol_clearance_tau_s": 300,
20
+ "training_exposure_s": 600,
21
+ "training_interval_s": 3000,
22
+ "conditioning_sessions": 3,
23
+ "biological_step_s": 60,
24
+ "delays_h": [
25
+ 0.5,
26
+ 3,
27
+ 6,
28
+ 12,
29
+ 24
30
+ ],
31
+ "conditions": [
32
+ "untrained",
33
+ "paired",
34
+ "unpaired",
35
+ "dan_silenced",
36
+ "dan_acquisition",
37
+ "dan_consolidation"
38
+ ],
39
+ "models": [
40
+ "consolidating",
41
+ "decay_only"
42
+ ],
43
+ "learning_dan_dependence": false,
44
+ "calibration_delays_h": [
45
+ 0.5,
46
+ 24
47
+ ],
48
+ "prediction_delays_h": [
49
+ 3,
50
+ 6,
51
+ 12
52
+ ],
53
+ "motor_value_gain": 4.0,
54
+ "innate_value": 0.15,
55
+ "test_duration_s": 120.0,
56
+ "physics_dt_s": 0.0001,
57
+ "control_dt_s": 0.02,
58
+ "base_drive": 1,
59
+ "max_turn": 0.6,
60
+ "turn_gain": 120.0,
61
+ "motor_noise_sd": 0.18,
62
+ "source_x_mm": 19,
63
+ "source_y_mm": 9,
64
+ "odor_length_mm": 40.0,
65
+ "choice_x_mm": 12,
66
+ "choice_abs_y_mm": 2.5,
67
+ "odor_noise_sd": 0.0008,
68
+ "video_fps": 25,
69
+ "protocol": "paper_paired",
70
+ "center_motor_readout": true,
71
+ "adaptation_epsilon": 0.01,
72
+ "motor_denominator_floor": 0.05,
73
+ "stem_mm": 30.0,
74
+ "arm_mm": 60.0,
75
+ "corridor_width_mm": 10.0,
76
+ "collection_depth_mm": 8.0,
77
+ "capture_policy": "absorbing collection region; approximation to collection vials",
78
+ "readout": "functional concentration-normalized population contrast",
79
+ "fitted_delays_h": [
80
+ 0.5,
81
+ 24.0
82
+ ],
83
+ "held_out_delays_h": [
84
+ 3.0,
85
+ 6.0,
86
+ 12.0,
87
+ 15.0,
88
+ 48.0
89
+ ],
90
+ "individual_controller_v4": true,
91
+ "behavioral_gain": 50.0,
92
+ "gait_seed": 1424429130
93
+ },
94
+ "phenotype": {
95
+ "gait_seed": 1424429130,
96
+ "sensory_seed": 684351289,
97
+ "motor_seed": 2271527716,
98
+ "heading_seed": 1471730832,
99
+ "motor_noise_sd": 0.14187008607699722
100
+ },
101
+ "learning_gain": 0.9302875423393265,
102
+ "seed": 1873172852
103
+ }
raw/v4b/validation/unpaired/24h/rep03_odor0_side0/learning_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:205a0182ba43c5071ee29c4aab1b6c31abc3bb9645b04e249f5348585586693d
3
+ size 8108234
raw/v4b/validation/unpaired/24h/rep03_odor0_side0/learning_states.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:3aded2dd42f12c4ab2ca4fe99668e83f7c30b6c50c632e9fa9c0b129235e90b0
3
+ size 133486
raw/v4b/validation/unpaired/24h/rep03_odor0_side0/physics_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ab7408a543486024e78d9aefe73f5a79770cbff4d902e427e1264032bceaf0bd
3
+ size 2439230
raw/v4b/validation/unpaired/24h/rep03_odor0_side0/replay.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:46920ad874aa6d73413fd0e4021481dbc9b55ea2ee6a0030ab9e0db98085dead
3
+ size 82707
raw/v4b/validation/unpaired/24h/rep03_odor0_side0/state_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:7082a9514bdd8f7602486211b3ca5d84b36981000638eb6de8629d824fe7081a
3
+ size 369171
raw/v4b/validation/unpaired/24h/rep03_odor0_side0/summary.json ADDED
@@ -0,0 +1,29 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "model": "consolidating",
3
+ "condition": "unpaired",
4
+ "delay_h": 24.0,
5
+ "replicate": 3,
6
+ "paired_odor": "A",
7
+ "b_left": false,
8
+ "fly_id": "consolidating_unpaired_24h_3_0_0",
9
+ "gait_seed": 1424429130,
10
+ "sensory_seed": 684351289,
11
+ "motor_seed": 2271527716,
12
+ "heading_seed": 1471730832,
13
+ "motor_noise_sd": 0.14187008607699722,
14
+ "seed": 1873172852,
15
+ "learning_gain": 0.9302875423393265,
16
+ "choice": "B",
17
+ "choice_latency_s": 5.7929,
18
+ "termination": "test_window_complete",
19
+ "score": -1,
20
+ "neural_value_difference": -0.0013800629929316224,
21
+ "physics_ticks": 57929,
22
+ "control_rows": 6000,
23
+ "assay_duration_s": 120.0,
24
+ "test_start_biological_s": 96000.0,
25
+ "captured": true,
26
+ "physical_time_s": 5.7929,
27
+ "capture_policy": "absorbing collection region; approximation to collection vials",
28
+ "diagnostic": false
29
+ }
raw/v4b/validation/unpaired/24h/rep03_odor0_side1/individual_configuration.json ADDED
@@ -0,0 +1,103 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "config": {
3
+ "schema_version": 1,
4
+ "dataset": "FlyWire FAFB v783",
5
+ "master_seed": 920618,
6
+ "odor_encoding_seed": 7331,
7
+ "min_pair_synapses": 5,
8
+ "kc_threshold": 0.15,
9
+ "kc_sparsity_quantile": 0.85,
10
+ "odor_sparsity": 0.2,
11
+ "acquisition_per_s": 0.0015,
12
+ "aversive_tau_h": 4.0,
13
+ "consolidation_tau_h": 12.0,
14
+ "long_memory_tau_h": 168,
15
+ "appetitive_scale": 1,
16
+ "aversive_scale": 1.0,
17
+ "decay_only_appetitive_scale": 0.35,
18
+ "ethanol_uptake_tau_s": 120,
19
+ "ethanol_clearance_tau_s": 300,
20
+ "training_exposure_s": 600,
21
+ "training_interval_s": 3000,
22
+ "conditioning_sessions": 3,
23
+ "biological_step_s": 60,
24
+ "delays_h": [
25
+ 0.5,
26
+ 3,
27
+ 6,
28
+ 12,
29
+ 24
30
+ ],
31
+ "conditions": [
32
+ "untrained",
33
+ "paired",
34
+ "unpaired",
35
+ "dan_silenced",
36
+ "dan_acquisition",
37
+ "dan_consolidation"
38
+ ],
39
+ "models": [
40
+ "consolidating",
41
+ "decay_only"
42
+ ],
43
+ "learning_dan_dependence": false,
44
+ "calibration_delays_h": [
45
+ 0.5,
46
+ 24
47
+ ],
48
+ "prediction_delays_h": [
49
+ 3,
50
+ 6,
51
+ 12
52
+ ],
53
+ "motor_value_gain": 4.0,
54
+ "innate_value": 0.15,
55
+ "test_duration_s": 120.0,
56
+ "physics_dt_s": 0.0001,
57
+ "control_dt_s": 0.02,
58
+ "base_drive": 1,
59
+ "max_turn": 0.6,
60
+ "turn_gain": 120.0,
61
+ "motor_noise_sd": 0.18,
62
+ "source_x_mm": 19,
63
+ "source_y_mm": 9,
64
+ "odor_length_mm": 40.0,
65
+ "choice_x_mm": 12,
66
+ "choice_abs_y_mm": 2.5,
67
+ "odor_noise_sd": 0.0008,
68
+ "video_fps": 25,
69
+ "protocol": "paper_paired",
70
+ "center_motor_readout": true,
71
+ "adaptation_epsilon": 0.01,
72
+ "motor_denominator_floor": 0.05,
73
+ "stem_mm": 30.0,
74
+ "arm_mm": 60.0,
75
+ "corridor_width_mm": 10.0,
76
+ "collection_depth_mm": 8.0,
77
+ "capture_policy": "absorbing collection region; approximation to collection vials",
78
+ "readout": "functional concentration-normalized population contrast",
79
+ "fitted_delays_h": [
80
+ 0.5,
81
+ 24.0
82
+ ],
83
+ "held_out_delays_h": [
84
+ 3.0,
85
+ 6.0,
86
+ 12.0,
87
+ 15.0,
88
+ 48.0
89
+ ],
90
+ "individual_controller_v4": true,
91
+ "behavioral_gain": 50.0,
92
+ "gait_seed": 888431942
93
+ },
94
+ "phenotype": {
95
+ "gait_seed": 888431942,
96
+ "sensory_seed": 675461882,
97
+ "motor_seed": 2565197114,
98
+ "heading_seed": 2568310762,
99
+ "motor_noise_sd": 0.2106659721549615
100
+ },
101
+ "learning_gain": 0.7268085093067868,
102
+ "seed": 380421138
103
+ }
raw/v4b/validation/unpaired/24h/rep03_odor0_side1/learning_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:f2fb8ab52d0fd08e608d44b7fe55a17d7db61cf2b14f22a1045f39c945f23d93
3
+ size 8102502