Histochemichael commited on
Commit
daf930d
·
verified ·
1 Parent(s): 0319754

Preserve remaining raw simulation records batch 4

Browse files
Files changed (28) hide show
  1. raw/v4b/validation/unpaired/0.5h/rep03_odor0_side1/learning_states.npz +3 -0
  2. raw/v4b/validation/unpaired/0.5h/rep03_odor0_side1/physics_history.parquet +3 -0
  3. raw/v4b/validation/unpaired/0.5h/rep03_odor0_side1/replay.npz +3 -0
  4. raw/v4b/validation/unpaired/0.5h/rep03_odor0_side1/state_history.parquet +3 -0
  5. raw/v4b/validation/unpaired/0.5h/rep03_odor0_side1/summary.json +29 -0
  6. raw/v4b/validation/unpaired/0.5h/rep03_odor1_side0/individual_configuration.json +103 -0
  7. raw/v4b/validation/unpaired/0.5h/rep03_odor1_side0/learning_history.parquet +3 -0
  8. raw/v4b/validation/unpaired/0.5h/rep03_odor1_side0/learning_states.npz +3 -0
  9. raw/v4b/validation/unpaired/0.5h/rep03_odor1_side0/physics_history.parquet +3 -0
  10. raw/v4b/validation/unpaired/0.5h/rep03_odor1_side0/replay.npz +3 -0
  11. raw/v4b/validation/unpaired/0.5h/rep03_odor1_side0/state_history.parquet +3 -0
  12. raw/v4b/validation/unpaired/0.5h/rep03_odor1_side0/summary.json +29 -0
  13. raw/v4b/validation/unpaired/0.5h/rep03_odor1_side1/individual_configuration.json +103 -0
  14. raw/v4b/validation/unpaired/0.5h/rep03_odor1_side1/learning_history.parquet +3 -0
  15. raw/v4b/validation/unpaired/0.5h/rep03_odor1_side1/learning_states.npz +3 -0
  16. raw/v4b/validation/unpaired/0.5h/rep03_odor1_side1/physics_history.parquet +3 -0
  17. raw/v4b/validation/unpaired/0.5h/rep03_odor1_side1/replay.npz +3 -0
  18. raw/v4b/validation/unpaired/0.5h/rep03_odor1_side1/state_history.parquet +3 -0
  19. raw/v4b/validation/unpaired/0.5h/rep03_odor1_side1/summary.json +29 -0
  20. raw/v4b/validation/unpaired/0.5h/rep04_odor0_side0/individual_configuration.json +103 -0
  21. raw/v4b/validation/unpaired/0.5h/rep04_odor0_side0/learning_history.parquet +3 -0
  22. raw/v4b/validation/unpaired/0.5h/rep04_odor0_side0/learning_states.npz +3 -0
  23. raw/v4b/validation/unpaired/0.5h/rep04_odor0_side0/physics_history.parquet +3 -0
  24. raw/v4b/validation/unpaired/0.5h/rep04_odor0_side0/replay.npz +3 -0
  25. raw/v4b/validation/unpaired/0.5h/rep04_odor0_side0/state_history.parquet +3 -0
  26. raw/v4b/validation/unpaired/0.5h/rep04_odor0_side0/summary.json +29 -0
  27. raw/v4b/validation/unpaired/0.5h/rep04_odor0_side1/individual_configuration.json +103 -0
  28. raw/v4b/validation/unpaired/0.5h/rep04_odor0_side1/learning_history.parquet +3 -0
raw/v4b/validation/unpaired/0.5h/rep03_odor0_side1/learning_states.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:7caf9551742a1fe4904b93f22b1affe9da7109ddebd3b8cb46d8bb539eec7aea
3
+ size 133622
raw/v4b/validation/unpaired/0.5h/rep03_odor0_side1/physics_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:8adc318384c48b18658c09ce70a8829dd5124ef7067cb1305a960b4cb3cd5f8a
3
+ size 2431627
raw/v4b/validation/unpaired/0.5h/rep03_odor0_side1/replay.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:54a2c9af92aa64ba86c280d6bb91f03436fc3610cfa3f765550d4285a64d8950
3
+ size 82745
raw/v4b/validation/unpaired/0.5h/rep03_odor0_side1/state_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:04e6a503261e2bf243d9c243ca0baff4c85373d0a69a360beb7da6990b5b23f4
3
+ size 371691
raw/v4b/validation/unpaired/0.5h/rep03_odor0_side1/summary.json ADDED
@@ -0,0 +1,29 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "model": "consolidating",
3
+ "condition": "unpaired",
4
+ "delay_h": 0.5,
5
+ "replicate": 3,
6
+ "paired_odor": "A",
7
+ "b_left": true,
8
+ "fly_id": "consolidating_unpaired_0.5h_3_0_1",
9
+ "gait_seed": 977331218,
10
+ "sensory_seed": 3524016048,
11
+ "motor_seed": 499393203,
12
+ "heading_seed": 870727297,
13
+ "motor_noise_sd": 0.19232062748218595,
14
+ "seed": 3847648126,
15
+ "learning_gain": 1.2528042130040404,
16
+ "choice": "B",
17
+ "choice_latency_s": 5.7768,
18
+ "termination": "test_window_complete",
19
+ "score": -1,
20
+ "neural_value_difference": 0.0011536143113692549,
21
+ "physics_ticks": 57768,
22
+ "control_rows": 6000,
23
+ "assay_duration_s": 120.0,
24
+ "test_start_biological_s": 11400.0,
25
+ "captured": true,
26
+ "physical_time_s": 5.776800000000001,
27
+ "capture_policy": "absorbing collection region; approximation to collection vials",
28
+ "diagnostic": false
29
+ }
raw/v4b/validation/unpaired/0.5h/rep03_odor1_side0/individual_configuration.json ADDED
@@ -0,0 +1,103 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "config": {
3
+ "schema_version": 1,
4
+ "dataset": "FlyWire FAFB v783",
5
+ "master_seed": 920618,
6
+ "odor_encoding_seed": 7331,
7
+ "min_pair_synapses": 5,
8
+ "kc_threshold": 0.15,
9
+ "kc_sparsity_quantile": 0.85,
10
+ "odor_sparsity": 0.2,
11
+ "acquisition_per_s": 0.0015,
12
+ "aversive_tau_h": 4.0,
13
+ "consolidation_tau_h": 12.0,
14
+ "long_memory_tau_h": 168,
15
+ "appetitive_scale": 1,
16
+ "aversive_scale": 1.0,
17
+ "decay_only_appetitive_scale": 0.35,
18
+ "ethanol_uptake_tau_s": 120,
19
+ "ethanol_clearance_tau_s": 300,
20
+ "training_exposure_s": 600,
21
+ "training_interval_s": 3000,
22
+ "conditioning_sessions": 3,
23
+ "biological_step_s": 60,
24
+ "delays_h": [
25
+ 0.5,
26
+ 3,
27
+ 6,
28
+ 12,
29
+ 24
30
+ ],
31
+ "conditions": [
32
+ "untrained",
33
+ "paired",
34
+ "unpaired",
35
+ "dan_silenced",
36
+ "dan_acquisition",
37
+ "dan_consolidation"
38
+ ],
39
+ "models": [
40
+ "consolidating",
41
+ "decay_only"
42
+ ],
43
+ "learning_dan_dependence": false,
44
+ "calibration_delays_h": [
45
+ 0.5,
46
+ 24
47
+ ],
48
+ "prediction_delays_h": [
49
+ 3,
50
+ 6,
51
+ 12
52
+ ],
53
+ "motor_value_gain": 4.0,
54
+ "innate_value": 0.15,
55
+ "test_duration_s": 120.0,
56
+ "physics_dt_s": 0.0001,
57
+ "control_dt_s": 0.02,
58
+ "base_drive": 1,
59
+ "max_turn": 0.6,
60
+ "turn_gain": 120.0,
61
+ "motor_noise_sd": 0.18,
62
+ "source_x_mm": 19,
63
+ "source_y_mm": 9,
64
+ "odor_length_mm": 40.0,
65
+ "choice_x_mm": 12,
66
+ "choice_abs_y_mm": 2.5,
67
+ "odor_noise_sd": 0.0008,
68
+ "video_fps": 25,
69
+ "protocol": "paper_paired",
70
+ "center_motor_readout": true,
71
+ "adaptation_epsilon": 0.01,
72
+ "motor_denominator_floor": 0.05,
73
+ "stem_mm": 30.0,
74
+ "arm_mm": 60.0,
75
+ "corridor_width_mm": 10.0,
76
+ "collection_depth_mm": 8.0,
77
+ "capture_policy": "absorbing collection region; approximation to collection vials",
78
+ "readout": "functional concentration-normalized population contrast",
79
+ "fitted_delays_h": [
80
+ 0.5,
81
+ 24.0
82
+ ],
83
+ "held_out_delays_h": [
84
+ 3.0,
85
+ 6.0,
86
+ 12.0,
87
+ 15.0,
88
+ 48.0
89
+ ],
90
+ "individual_controller_v4": true,
91
+ "behavioral_gain": 50.0,
92
+ "gait_seed": 223422572
93
+ },
94
+ "phenotype": {
95
+ "gait_seed": 223422572,
96
+ "sensory_seed": 4102261425,
97
+ "motor_seed": 1806037837,
98
+ "heading_seed": 879849345,
99
+ "motor_noise_sd": 0.20536637114988468
100
+ },
101
+ "learning_gain": 1.1875132940483966,
102
+ "seed": 2512086354
103
+ }
raw/v4b/validation/unpaired/0.5h/rep03_odor1_side0/learning_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:566ccf427500b15a65fbe9b02b012b7417ecc12a03f260bf16ee5bfef512f7c3
3
+ size 2447271
raw/v4b/validation/unpaired/0.5h/rep03_odor1_side0/learning_states.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:5ac69ed5afd715086143e0d082f6b7e3c969db13e27d9f6f7c572a67b1de2b77
3
+ size 133667
raw/v4b/validation/unpaired/0.5h/rep03_odor1_side0/physics_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:abcabce716fcddd281149faede6e22094804032c64c63917e63f2f46eecb0b97
3
+ size 2463839
raw/v4b/validation/unpaired/0.5h/rep03_odor1_side0/replay.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:a4979a0a1e8639cae99d90801fd7b89428651b41900470de9a0bd4d8650046ca
3
+ size 83823
raw/v4b/validation/unpaired/0.5h/rep03_odor1_side0/state_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e3887d8b249869eb460e66731bd0d0ae9696e7b75b91d7f21856619f7a58979f
3
+ size 373816
raw/v4b/validation/unpaired/0.5h/rep03_odor1_side0/summary.json ADDED
@@ -0,0 +1,29 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "model": "consolidating",
3
+ "condition": "unpaired",
4
+ "delay_h": 0.5,
5
+ "replicate": 3,
6
+ "paired_odor": "B",
7
+ "b_left": false,
8
+ "fly_id": "consolidating_unpaired_0.5h_3_1_0",
9
+ "gait_seed": 223422572,
10
+ "sensory_seed": 4102261425,
11
+ "motor_seed": 1806037837,
12
+ "heading_seed": 879849345,
13
+ "motor_noise_sd": 0.20536637114988468,
14
+ "seed": 2512086354,
15
+ "learning_gain": 1.1875132940483966,
16
+ "choice": "B",
17
+ "choice_latency_s": 5.8468,
18
+ "termination": "test_window_complete",
19
+ "score": 1,
20
+ "neural_value_difference": 0.0009359751035904755,
21
+ "physics_ticks": 58468,
22
+ "control_rows": 6000,
23
+ "assay_duration_s": 120.0,
24
+ "test_start_biological_s": 11400.0,
25
+ "captured": true,
26
+ "physical_time_s": 5.8468,
27
+ "capture_policy": "absorbing collection region; approximation to collection vials",
28
+ "diagnostic": false
29
+ }
raw/v4b/validation/unpaired/0.5h/rep03_odor1_side1/individual_configuration.json ADDED
@@ -0,0 +1,103 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "config": {
3
+ "schema_version": 1,
4
+ "dataset": "FlyWire FAFB v783",
5
+ "master_seed": 920618,
6
+ "odor_encoding_seed": 7331,
7
+ "min_pair_synapses": 5,
8
+ "kc_threshold": 0.15,
9
+ "kc_sparsity_quantile": 0.85,
10
+ "odor_sparsity": 0.2,
11
+ "acquisition_per_s": 0.0015,
12
+ "aversive_tau_h": 4.0,
13
+ "consolidation_tau_h": 12.0,
14
+ "long_memory_tau_h": 168,
15
+ "appetitive_scale": 1,
16
+ "aversive_scale": 1.0,
17
+ "decay_only_appetitive_scale": 0.35,
18
+ "ethanol_uptake_tau_s": 120,
19
+ "ethanol_clearance_tau_s": 300,
20
+ "training_exposure_s": 600,
21
+ "training_interval_s": 3000,
22
+ "conditioning_sessions": 3,
23
+ "biological_step_s": 60,
24
+ "delays_h": [
25
+ 0.5,
26
+ 3,
27
+ 6,
28
+ 12,
29
+ 24
30
+ ],
31
+ "conditions": [
32
+ "untrained",
33
+ "paired",
34
+ "unpaired",
35
+ "dan_silenced",
36
+ "dan_acquisition",
37
+ "dan_consolidation"
38
+ ],
39
+ "models": [
40
+ "consolidating",
41
+ "decay_only"
42
+ ],
43
+ "learning_dan_dependence": false,
44
+ "calibration_delays_h": [
45
+ 0.5,
46
+ 24
47
+ ],
48
+ "prediction_delays_h": [
49
+ 3,
50
+ 6,
51
+ 12
52
+ ],
53
+ "motor_value_gain": 4.0,
54
+ "innate_value": 0.15,
55
+ "test_duration_s": 120.0,
56
+ "physics_dt_s": 0.0001,
57
+ "control_dt_s": 0.02,
58
+ "base_drive": 1,
59
+ "max_turn": 0.6,
60
+ "turn_gain": 120.0,
61
+ "motor_noise_sd": 0.18,
62
+ "source_x_mm": 19,
63
+ "source_y_mm": 9,
64
+ "odor_length_mm": 40.0,
65
+ "choice_x_mm": 12,
66
+ "choice_abs_y_mm": 2.5,
67
+ "odor_noise_sd": 0.0008,
68
+ "video_fps": 25,
69
+ "protocol": "paper_paired",
70
+ "center_motor_readout": true,
71
+ "adaptation_epsilon": 0.01,
72
+ "motor_denominator_floor": 0.05,
73
+ "stem_mm": 30.0,
74
+ "arm_mm": 60.0,
75
+ "corridor_width_mm": 10.0,
76
+ "collection_depth_mm": 8.0,
77
+ "capture_policy": "absorbing collection region; approximation to collection vials",
78
+ "readout": "functional concentration-normalized population contrast",
79
+ "fitted_delays_h": [
80
+ 0.5,
81
+ 24.0
82
+ ],
83
+ "held_out_delays_h": [
84
+ 3.0,
85
+ 6.0,
86
+ 12.0,
87
+ 15.0,
88
+ 48.0
89
+ ],
90
+ "individual_controller_v4": true,
91
+ "behavioral_gain": 50.0,
92
+ "gait_seed": 522971381
93
+ },
94
+ "phenotype": {
95
+ "gait_seed": 522971381,
96
+ "sensory_seed": 1662021100,
97
+ "motor_seed": 1055797597,
98
+ "heading_seed": 3360770282,
99
+ "motor_noise_sd": 0.19528440511397133
100
+ },
101
+ "learning_gain": 1.0390391203999871,
102
+ "seed": 546995247
103
+ }
raw/v4b/validation/unpaired/0.5h/rep03_odor1_side1/learning_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:a741709ebd577bf006f0ce92fb62a527664a82304c14732a3aea65044465d909
3
+ size 2452203
raw/v4b/validation/unpaired/0.5h/rep03_odor1_side1/learning_states.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:32c165a5a97254640cd932287089ef94c9405ebe18019dfe14ce21e91625aa81
3
+ size 133605
raw/v4b/validation/unpaired/0.5h/rep03_odor1_side1/physics_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:47278928835a0bec02d9d67529a0508d89633bf1e4b8f7d158580f23bede09b9
3
+ size 2446432
raw/v4b/validation/unpaired/0.5h/rep03_odor1_side1/replay.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:773074e56aa3a81c708ace7dfc1b2e80fa8c7aa958d724369cb14a364b532a89
3
+ size 83257
raw/v4b/validation/unpaired/0.5h/rep03_odor1_side1/state_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:c3cf28ed35b277979bf7eb42bb0240aea7e1525bee5d38d9c82af8ca84fa4f1f
3
+ size 372590
raw/v4b/validation/unpaired/0.5h/rep03_odor1_side1/summary.json ADDED
@@ -0,0 +1,29 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "model": "consolidating",
3
+ "condition": "unpaired",
4
+ "delay_h": 0.5,
5
+ "replicate": 3,
6
+ "paired_odor": "B",
7
+ "b_left": true,
8
+ "fly_id": "consolidating_unpaired_0.5h_3_1_1",
9
+ "gait_seed": 522971381,
10
+ "sensory_seed": 1662021100,
11
+ "motor_seed": 1055797597,
12
+ "heading_seed": 3360770282,
13
+ "motor_noise_sd": 0.19528440511397133,
14
+ "seed": 546995247,
15
+ "learning_gain": 1.0390391203999871,
16
+ "choice": "A",
17
+ "choice_latency_s": 5.8118,
18
+ "termination": "test_window_complete",
19
+ "score": -1,
20
+ "neural_value_difference": 0.0008191357703091918,
21
+ "physics_ticks": 58118,
22
+ "control_rows": 6000,
23
+ "assay_duration_s": 120.0,
24
+ "test_start_biological_s": 11400.0,
25
+ "captured": true,
26
+ "physical_time_s": 5.8118,
27
+ "capture_policy": "absorbing collection region; approximation to collection vials",
28
+ "diagnostic": false
29
+ }
raw/v4b/validation/unpaired/0.5h/rep04_odor0_side0/individual_configuration.json ADDED
@@ -0,0 +1,103 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "config": {
3
+ "schema_version": 1,
4
+ "dataset": "FlyWire FAFB v783",
5
+ "master_seed": 920618,
6
+ "odor_encoding_seed": 7331,
7
+ "min_pair_synapses": 5,
8
+ "kc_threshold": 0.15,
9
+ "kc_sparsity_quantile": 0.85,
10
+ "odor_sparsity": 0.2,
11
+ "acquisition_per_s": 0.0015,
12
+ "aversive_tau_h": 4.0,
13
+ "consolidation_tau_h": 12.0,
14
+ "long_memory_tau_h": 168,
15
+ "appetitive_scale": 1,
16
+ "aversive_scale": 1.0,
17
+ "decay_only_appetitive_scale": 0.35,
18
+ "ethanol_uptake_tau_s": 120,
19
+ "ethanol_clearance_tau_s": 300,
20
+ "training_exposure_s": 600,
21
+ "training_interval_s": 3000,
22
+ "conditioning_sessions": 3,
23
+ "biological_step_s": 60,
24
+ "delays_h": [
25
+ 0.5,
26
+ 3,
27
+ 6,
28
+ 12,
29
+ 24
30
+ ],
31
+ "conditions": [
32
+ "untrained",
33
+ "paired",
34
+ "unpaired",
35
+ "dan_silenced",
36
+ "dan_acquisition",
37
+ "dan_consolidation"
38
+ ],
39
+ "models": [
40
+ "consolidating",
41
+ "decay_only"
42
+ ],
43
+ "learning_dan_dependence": false,
44
+ "calibration_delays_h": [
45
+ 0.5,
46
+ 24
47
+ ],
48
+ "prediction_delays_h": [
49
+ 3,
50
+ 6,
51
+ 12
52
+ ],
53
+ "motor_value_gain": 4.0,
54
+ "innate_value": 0.15,
55
+ "test_duration_s": 120.0,
56
+ "physics_dt_s": 0.0001,
57
+ "control_dt_s": 0.02,
58
+ "base_drive": 1,
59
+ "max_turn": 0.6,
60
+ "turn_gain": 120.0,
61
+ "motor_noise_sd": 0.18,
62
+ "source_x_mm": 19,
63
+ "source_y_mm": 9,
64
+ "odor_length_mm": 40.0,
65
+ "choice_x_mm": 12,
66
+ "choice_abs_y_mm": 2.5,
67
+ "odor_noise_sd": 0.0008,
68
+ "video_fps": 25,
69
+ "protocol": "paper_paired",
70
+ "center_motor_readout": true,
71
+ "adaptation_epsilon": 0.01,
72
+ "motor_denominator_floor": 0.05,
73
+ "stem_mm": 30.0,
74
+ "arm_mm": 60.0,
75
+ "corridor_width_mm": 10.0,
76
+ "collection_depth_mm": 8.0,
77
+ "capture_policy": "absorbing collection region; approximation to collection vials",
78
+ "readout": "functional concentration-normalized population contrast",
79
+ "fitted_delays_h": [
80
+ 0.5,
81
+ 24.0
82
+ ],
83
+ "held_out_delays_h": [
84
+ 3.0,
85
+ 6.0,
86
+ 12.0,
87
+ 15.0,
88
+ 48.0
89
+ ],
90
+ "individual_controller_v4": true,
91
+ "behavioral_gain": 50.0,
92
+ "gait_seed": 3218630911
93
+ },
94
+ "phenotype": {
95
+ "gait_seed": 3218630911,
96
+ "sensory_seed": 3015845027,
97
+ "motor_seed": 608455302,
98
+ "heading_seed": 3494708631,
99
+ "motor_noise_sd": 0.19655089491047778
100
+ },
101
+ "learning_gain": 0.7824823541646346,
102
+ "seed": 1339365232
103
+ }
raw/v4b/validation/unpaired/0.5h/rep04_odor0_side0/learning_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:9cf151ae061268ed38d8b17f09616df79757828267e4263f521b25c7f9a9dfd4
3
+ size 2450739
raw/v4b/validation/unpaired/0.5h/rep04_odor0_side0/learning_states.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ef27559c4bdb5076f727d51614636d7638d128f67071c4da6856e6fc6c4563f5
3
+ size 133644
raw/v4b/validation/unpaired/0.5h/rep04_odor0_side0/physics_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ba4f5e0019fcd32a5461ee735d75ea2a6f25993fe552b6f95fecbc0d0c4b308a
3
+ size 2446426
raw/v4b/validation/unpaired/0.5h/rep04_odor0_side0/replay.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:01d8fc624c4d7e18021ae2e07ff905555674ba5d4c291b4b868efc2a858e2868
3
+ size 83257
raw/v4b/validation/unpaired/0.5h/rep04_odor0_side0/state_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ae9011c7a11ecc1d0358191726246a2ba160a56847b27f929d41ad48202e3e56
3
+ size 371951
raw/v4b/validation/unpaired/0.5h/rep04_odor0_side0/summary.json ADDED
@@ -0,0 +1,29 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "model": "consolidating",
3
+ "condition": "unpaired",
4
+ "delay_h": 0.5,
5
+ "replicate": 4,
6
+ "paired_odor": "A",
7
+ "b_left": false,
8
+ "fly_id": "consolidating_unpaired_0.5h_4_0_0",
9
+ "gait_seed": 3218630911,
10
+ "sensory_seed": 3015845027,
11
+ "motor_seed": 608455302,
12
+ "heading_seed": 3494708631,
13
+ "motor_noise_sd": 0.19655089491047778,
14
+ "seed": 1339365232,
15
+ "learning_gain": 0.7824823541646346,
16
+ "choice": "B",
17
+ "choice_latency_s": 5.8094,
18
+ "termination": "test_window_complete",
19
+ "score": -1,
20
+ "neural_value_difference": 0.0007211360906581707,
21
+ "physics_ticks": 58094,
22
+ "control_rows": 6000,
23
+ "assay_duration_s": 120.0,
24
+ "test_start_biological_s": 11400.0,
25
+ "captured": true,
26
+ "physical_time_s": 5.8094,
27
+ "capture_policy": "absorbing collection region; approximation to collection vials",
28
+ "diagnostic": false
29
+ }
raw/v4b/validation/unpaired/0.5h/rep04_odor0_side1/individual_configuration.json ADDED
@@ -0,0 +1,103 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "config": {
3
+ "schema_version": 1,
4
+ "dataset": "FlyWire FAFB v783",
5
+ "master_seed": 920618,
6
+ "odor_encoding_seed": 7331,
7
+ "min_pair_synapses": 5,
8
+ "kc_threshold": 0.15,
9
+ "kc_sparsity_quantile": 0.85,
10
+ "odor_sparsity": 0.2,
11
+ "acquisition_per_s": 0.0015,
12
+ "aversive_tau_h": 4.0,
13
+ "consolidation_tau_h": 12.0,
14
+ "long_memory_tau_h": 168,
15
+ "appetitive_scale": 1,
16
+ "aversive_scale": 1.0,
17
+ "decay_only_appetitive_scale": 0.35,
18
+ "ethanol_uptake_tau_s": 120,
19
+ "ethanol_clearance_tau_s": 300,
20
+ "training_exposure_s": 600,
21
+ "training_interval_s": 3000,
22
+ "conditioning_sessions": 3,
23
+ "biological_step_s": 60,
24
+ "delays_h": [
25
+ 0.5,
26
+ 3,
27
+ 6,
28
+ 12,
29
+ 24
30
+ ],
31
+ "conditions": [
32
+ "untrained",
33
+ "paired",
34
+ "unpaired",
35
+ "dan_silenced",
36
+ "dan_acquisition",
37
+ "dan_consolidation"
38
+ ],
39
+ "models": [
40
+ "consolidating",
41
+ "decay_only"
42
+ ],
43
+ "learning_dan_dependence": false,
44
+ "calibration_delays_h": [
45
+ 0.5,
46
+ 24
47
+ ],
48
+ "prediction_delays_h": [
49
+ 3,
50
+ 6,
51
+ 12
52
+ ],
53
+ "motor_value_gain": 4.0,
54
+ "innate_value": 0.15,
55
+ "test_duration_s": 120.0,
56
+ "physics_dt_s": 0.0001,
57
+ "control_dt_s": 0.02,
58
+ "base_drive": 1,
59
+ "max_turn": 0.6,
60
+ "turn_gain": 120.0,
61
+ "motor_noise_sd": 0.18,
62
+ "source_x_mm": 19,
63
+ "source_y_mm": 9,
64
+ "odor_length_mm": 40.0,
65
+ "choice_x_mm": 12,
66
+ "choice_abs_y_mm": 2.5,
67
+ "odor_noise_sd": 0.0008,
68
+ "video_fps": 25,
69
+ "protocol": "paper_paired",
70
+ "center_motor_readout": true,
71
+ "adaptation_epsilon": 0.01,
72
+ "motor_denominator_floor": 0.05,
73
+ "stem_mm": 30.0,
74
+ "arm_mm": 60.0,
75
+ "corridor_width_mm": 10.0,
76
+ "collection_depth_mm": 8.0,
77
+ "capture_policy": "absorbing collection region; approximation to collection vials",
78
+ "readout": "functional concentration-normalized population contrast",
79
+ "fitted_delays_h": [
80
+ 0.5,
81
+ 24.0
82
+ ],
83
+ "held_out_delays_h": [
84
+ 3.0,
85
+ 6.0,
86
+ 12.0,
87
+ 15.0,
88
+ 48.0
89
+ ],
90
+ "individual_controller_v4": true,
91
+ "behavioral_gain": 50.0,
92
+ "gait_seed": 3997184821
93
+ },
94
+ "phenotype": {
95
+ "gait_seed": 3997184821,
96
+ "sensory_seed": 303432257,
97
+ "motor_seed": 489585518,
98
+ "heading_seed": 2927268178,
99
+ "motor_noise_sd": 0.11955046464336361
100
+ },
101
+ "learning_gain": 1.1115269944813575,
102
+ "seed": 4292187975
103
+ }
raw/v4b/validation/unpaired/0.5h/rep04_odor0_side1/learning_history.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:545e36333d2510408df4adc315e200b385a98c39dca0b369d18e651a4291b855
3
+ size 2448986