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def stitch_images(images, margin=5, cols=5): if (len(images) == 0): return None (h, w, c) = images[0].shape n_rows = int(math.ceil((len(images) / cols))) n_cols = min(len(images), cols) out_w = ((n_cols * w) + ((n_cols - 1) * margin)) out_h = ((n_rows * h) + ((n_rows - 1) * margin)) ...
Utility function to stitch images together with a `margin`. Args: images: The array of 2D images to stitch. margin: The black border margin size between images (Default value = 5) cols: Max number of image cols. New row is created when number of images exceed the column size. (Default value = 5) Returns: A single num...
codesearchnet
def _open_file(filename): if (filename is None): raise DataSourceError('Trace filename is not defined') try: trace_file = open(filename, 'r') except IOError as e: raise DataSourceError(('Unable to open trace file %s' % filename), e) else: LOG.debug('Opened trace file %s',...
Attempt to open the the file at ``filename`` for reading. Raises: DataSourceError, if the file cannot be opened.
codesearchnet
def init_log(logger, loglevel=0): global log_tmp_dir, log_tmp_fn log_tmp_dir = tempfile.mkdtemp() log_tmp_fn = os.path.join(log_tmp_dir, 'multiqc.log') debug_template = '[%(asctime)s] %(name)-50s [%(levelname)-7s] %(message)s' info_template = '[%(levelname)-7s] %(module)15s : %(mess...
Initializes logging. Prints logs to console with level defined by loglevel Also prints verbose log to the multiqc data directory if available. (multiqc_data/multiqc.log) Args: loglevel (str): Determines the level of the log output.
juraj-google-style
def post_process_generation(self, generation: Union[str, List[str]], fix_markdown: bool=True, num_workers: Optional[int]=None) -> Union[str, List[str]]: requires_backends(self, ['nltk', 'levenshtein']) if isinstance(generation, list): if num_workers is not None and isinstance(num_workers, int): ...
Postprocess a generated text or a list of generated texts. This function can be used to perform postprocessing on generated text, such as fixing Markdown formatting. Postprocessing is quite slow so it is recommended to use multiprocessing to speed up the process. Args: generation (Union[str, List[str]]): The generat...
github-repos
def SCM(root_dir, repo=None): if Git.is_repo(root_dir) or Git.is_submodule(root_dir): return Git(root_dir, repo=repo) return NoSCM(root_dir, repo=repo)
Returns SCM instance that corresponds to a repo at the specified path. Args: root_dir (str): path to a root directory of the repo. repo (dvc.repo.Repo): dvc repo instance that root_dir belongs to. Returns: dvc.scm.base.Base: SCM instance.
juraj-google-style
def __init__(self, filename,f_start=None, f_stop=None,t_start=None, t_stop=None, load_data=True, max_load=1.): super(FilReader, self).__init__() self.header_keywords_types = sigproc.header_keyword_types if filename and os.path.isfile(filename): self.filename = filename ...
Constructor. Args: filename (str): filename of blimpy file. f_start (float): start frequency, in MHz f_stop (float): stop frequency, in MHz t_start (int): start time bin t_stop (int): stop time bin
juraj-google-style
def mkdir(path): try: os.makedirs(path) if (not os.path.isdir(path)): raise IOError('path is not a directory') except OSError as e: if ((e.errno == 17) and os.path.isdir(path)): return raise
Make a directory and its parents. Args: path (str): path to create Returns: None Raises: OSError if the directory cannot be created.
codesearchnet
def delete_bq_table(project, dataset_id, table_id): _LOGGER.info('Clean up a BigQuery table with project: %s, dataset: %s, table: %s.', project, dataset_id, table_id) client = bigquery.Client(project=project) table_ref = client.dataset(dataset_id).table(table_id) try: client.delete_table(table_r...
Delete a BiqQuery table. Args: project: Name of the project. dataset_id: Name of the dataset where table is. table_id: Name of the table.
github-repos
def from_config(cls, config): return cls(**config)
Instantiates a `Loss` from its config (output of `get_config()`). Args: config: Output of `get_config()`. Returns: A `Loss` instance.
github-repos
def get_percentage_lattice_parameter_changes(self): initial_latt = self.initial.lattice final_latt = self.final.lattice d = {l: ((getattr(final_latt, l) / getattr(initial_latt, l)) - 1) for l in ['a', 'b', 'c']} return d
Returns the percentage lattice parameter changes. Returns: A dict of the percentage change in lattice parameter, e.g., {'a': 0.012, 'b': 0.021, 'c': -0.031} implies a change of 1.2%, 2.1% and -3.1% in the a, b and c lattice parameters respectively.
codesearchnet
def execute_only_once(): f = inspect.currentframe().f_back ident = (f.f_code.co_filename, f.f_lineno) if (ident in _EXECUTE_HISTORY): return False _EXECUTE_HISTORY.add(ident) return True
Each called in the code to this function is guaranteed to return True the first time and False afterwards. Returns: bool: whether this is the first time this function gets called from this line of code. Example: .. code-block:: python if execute_only_once(): # do something only once
codesearchnet
def iterator_product(variables: VarType, parent: str=None) -> Iterable[VarMatrix]: logger.debug('Yielding from product iterator') if isinstance(variables, list): raise ValueError(f'Product only takes mappings of values, got {variables} of type {type(variables)}') (yield list(variable_matrix(variable...
Apply the product operator to a set of variables. This uses the python itertools.product iterator to combine multiple variables such that all possible combinations are generated. This is the default iterator however this is a method of manually specifying the option. Args: variables: The variables object parent: Unus...
codesearchnet
def __init__(self, points, add_bounding_box=False): self.points = list(points) dim = [len(i) for i in self.points] if max(dim) != min(dim): raise ValueError("Input points must all have the same dimension!") self.dim = dim[0] if add_bounding_box: c...
Initializes a VoronoiTess from points. Args: points ([[float]]): All the points as a sequence of sequences. e.g., [[-0.5, -0.5], [-0.5, 0.5], [0.5, -0.5], [0.5, 0.5]] add_bounding_box (bool): If True, a hypercube corresponding to the extremes of each coordinate will be added to the list of points.
juraj-google-style
def setMAC(self, xEUI): print '%s call setMAC' % self.port address64 = '' try: if not xEUI: address64 = self.mac if not isinstance(xEUI, str): address64 = self.__convertLongToString(xEUI) if len(...
set the extended addresss of Thread device Args: xEUI: extended address in hex format Returns: True: successful to set the extended address False: fail to set the extended address
juraj-google-style
def _build_late_dispatcher(func_name): def _late_dynamic_dispatcher(obj, *args): method = getattr(obj, func_name, None) if (not callable(method)): raise NotImplementedError(('Instance method %r is not implemented by %r.' % (func_name, obj))) return method(*args) return _late...
Return a function that calls method 'func_name' on objects. This is useful for building late-bound dynamic dispatch. Arguments: func_name: The name of the instance method that should be called. Returns: A function that takes an 'obj' parameter, followed by *args and returns the result of calling the instance method ...
codesearchnet
def rebuild(self, image_id=None, return_dict=True): if not image_id: image_id = self.image['id'] return self._perform_action( {"type": "rebuild", "image": image_id}, return_dict )
Restore the droplet to an image ( snapshot or backup ) Args: image_id (int): id of image Optional Args: return_dict (bool): Return a dict when True (default), otherwise return an Action. Returns dict or Action
juraj-google-style
def visit_Import(self, node): for import_alias in node.names: full_import = (import_alias.name, import_alias.asname) detection = self._api_analysis_spec.imports_to_detect.get(full_import, None) if detection: self.add_result(detection) self.add_log(detection.log_level,...
Handle visiting an import node in the AST. Args: node: Current Node
github-repos
def append(self, event, category=None): date = datetime.datetime.now() self.store.insert(0, (date, event, category)) if (len(self.store) > self.size): del self.store[(- 1)]
Adds a new event to the trace store. The event may hava a category Args: event (spade.message.Message): the event to be stored category (str, optional): a category to classify the event (Default value = None)
codesearchnet
def get_programs_dict(pkgname_only=None, flag_protected=False): ___ret = _get_programs_dict() __ret = ___ret if pkgname_only is None else OrderedDict(((pkgname_only, ___ret[pkgname_only]),)) if flag_protected: _ret = __ret else: _ret = copy.deepcopy(__ret) for value in _ret...
Scans COLLABORATORS_S packages for scripts, eventually filtering if arguments passed Args: pkgname_only: name of single package within COLLABORATORS_S flag_protected: include scripts starting with "_"? Returns: dictionary: {"packagename0": {"exeinfo": [ExeInfo00, ...], "description": description0}, ...}
juraj-google-style
def transform_absolute_coords(self, width, height): if self.type != EventType.POINTER_MOTION_ABSOLUTE: raise AttributeError(_wrong_meth.format(self.type)) abs_x = self._libinput \ .libinput_event_pointer_get_absolute_x_transformed( self._handle, width) abs_y = self._libinput \ .libinput_event_poi...
Return the current absolute coordinates of the pointer event, transformed to screen coordinates. For pointer events that are not of type :attr:`~libinput.constant.EventType.POINTER_MOTION_ABSOLUTE`, this method raises :exc:`AttributeError`. Args: width (int): The current output screen width. height (int): The current...
juraj-google-style
def get_structure_from_id(self, task_id, final_structure=True): args = {'task_id': task_id} field = 'output.crystal' if final_structure else 'input.crystal' results = tuple(self.query([field], args)) if len(results) > 1: raise QueryError("More than one result found ...
Returns a structure from the database given the task id. Args: task_id: The task_id to query for. final_structure: Whether to obtain the final or initial structure. Defaults to True.
juraj-google-style
def split(cls, tensor, split_dimension, num_devices, input_shape=None): if input_shape: shape = input_shape else: shape = tensor.shape.as_list() if shape[split_dimension] is not None and shape[split_dimension] < num_devices: raise ValueError('Split dimension was smaller than the requ...
Returns a Sharding that splits a tensor across a dimension. This creates a Tiled attribute, similar to tile(), but easier to use for the common case of tiling a tensor N ways in one dimension. Args: tensor: A tf.Tensor to split. split_dimension: The dimension number to split. num_devices: The number of cores to split...
github-repos
def locate(desktop_filename_or_name): paths = [ os.path.expanduser('~/.local/share/applications'), '/usr/share/applications'] result = [] for path in paths: for file in os.listdir(path): if desktop_filename_or_name in file.split( '.') or desktop_filename_or_name == file: result.append(os....
Locate a .desktop from the standard locations. Find the path to the .desktop file of a given .desktop filename or application name. Standard locations: - ``~/.local/share/applications/`` - ``/usr/share/applications`` Args: desktop_filename_or_name (str): Either the filename of a .desktop file or the name of an applicat...
juraj-google-style
def record_operation_forwardprop_only(op_type, output_tensors, input_tensors, backward_function, forwardprop_output_indices): pywrap_tfe.TFE_Py_TapeSetRecordOperationForwardprop(op_type, output_tensors, input_tensors, backward_function, forwardprop_output_indices)
Records the operation on all forward accumulators in the stack. Args: op_type: a string for the operation type, used in the backprop code output_tensors: a list of Python Tensor objects output by the operation input_tensors: a list of input Tensors to the recorded operation backward_function: the function to be called...
github-repos
def _prepare_init_params_from_job_description(cls, job_details, model_channel_name=None): init_params = super(Framework, cls)._prepare_init_params_from_job_description(job_details, model_channel_name) init_params['entry_point'] = json.loads(init_params['hyperparameters'].get(SCRIPT_PARAM_NAME)...
Convert the job description to init params that can be handled by the class constructor Args: job_details: the returned job details from a describe_training_job API call. model_channel_name (str): Name of the channel where pre-trained model data will be downloaded Returns: dictionary: The transformed init_params
juraj-google-style
def implicit_static(cls, for_type=None, for_types=None): for type_ in cls.__get_type_args(for_type, for_types): implementations = {} for function in cls.required(): method = getattr(type_, function.__name__, None) if (not callable(method)): raise TypeError(('%...
Automatically generate implementations for a type. Implement the protocol for the 'for_type' type by dispatching each member function of the protocol to an instance method of the same name declared on the type 'for_type'. Arguments: for_type: The type to implictly implement the protocol with. Raises: TypeError if no...
codesearchnet
def sh(cmd, ignore_error=False, cwd=None, shell=False, **kwargs): kwargs.update({'shell': shell, 'cwd': cwd, 'stderr': subprocess.STDOUT, 'stdout': subprocess.PIPE}) log.debug((('cmd', cmd), ('kwargs', kwargs))) p = subprocess.Popen(cmd, universal_newlines=True, **kwargs) p_stdout = p.communicate()[0] ...
Execute a command with subprocess.Popen and block until output Args: cmd (tuple or str): same as subprocess.Popen args Keyword Arguments: ignore_error (bool): if False, raise an Exception if p.returncode is not 0 cwd (str): current working directory path to run cmd with shell (bool): subprocess.Popen ``shell`` kwarg ...
codesearchnet
def subscribe_sns_topic_to_sqs(self, region): sns = self.session.resource('sns', region_name=region) topic = sns.Topic('arn:aws:sns:{}:{}:{}'.format(region, self.account.account_number, self.topic_name)) topic.subscribe(Protocol='sqs', Endpoint=self.sqs_queue) auditlog( ...
Subscribe SQS to the SNS topic. Returns the ARN of the SNS Topic subscribed Args: region (`str`): Name of the AWS region Returns: `str`
juraj-google-style
def _eventual_warn_about_too_long_sequence(self, ids: List[int], max_length: Optional[int], verbose: bool): if max_length is None and len(ids) > self.model_max_length and verbose and (self.model_max_length != 0): if not self.deprecation_warnings.get('sequence-length-is-longer-than-the-specified-maximum', Fa...
Depending on the input and internal state we might trigger a warning about a sequence that is too long for its corresponding model Args: ids (`List[str]`): The ids produced by the tokenization max_length (`int`, *optional*): The max_length desired (does not trigger a warning if it is set) verbose (`bool`): Whether or ...
github-repos
def __call__(self, fn): def output(app, *args, **kwargs): data = fn(app, *args, **kwargs) index = '{}-{}'.format(self.key, self.variable_type) if self.value is not None: app.tcex.playbook.add_output(self.key, self.value,...
Implement __call__ function for decorator. Args: fn (function): The decorated function. Returns: function: The custom decorator function.
juraj-google-style
async def verify_docker_image_task(chain, link): errors = [] worker_type = get_worker_type(link.task) if worker_type not in chain.context.config['valid_docker_image_worker_types']: errors.append("{} is not a valid docker-image workerType!".format(worker_type)) raise_on_errors(errors)
Verify the docker image Link. Args: chain (ChainOfTrust): the chain we're operating on. link (LinkOfTrust): the task link we're checking.
juraj-google-style
def _DefaultGradYs(grad_ys, ys, colocate_gradients_with_ops, gradient_uid='__unsupported__'): if len(grad_ys) != len(ys): raise ValueError(f'Length mismatch. Passed {len(grad_ys)} grad_ys for {len(ys)} ys') grad_ys = indexed_slices.convert_n_to_tensor_or_indexed_slices(grad_ys, name='grad_y') new_gr...
Fill in default values for grad_ys. Args: grad_ys: List of gradients, can contain None. ys: List of tensors. colocate_gradients_with_ops: If True, try colocating gradients with the corresponding op. gradient_uid: A unique identifier within the graph indicating which invocation of gradients is being executed. Used to c...
github-repos
def file_crc32(filename, block_size=_DEFAULT_BLOCK_SIZE): crc = 0 with FileIO(filename, mode='rb') as f: chunk = f.read(n=block_size) while chunk: crc = binascii.crc32(chunk, crc) chunk = f.read(n=block_size) return hex(crc & 4294967295)
Get the crc32 of the passed file. The crc32 of a file can be used for error checking; two files with the same crc32 are considered equivalent. Note that the entire file must be read to produce the crc32. Args: filename: string, path to a file block_size: Integer, process the files by reading blocks of `block_size` by...
github-repos
def convertTime(self, time): m_format = "" if time.minute: m_format = ":%M" timeString = time.strftime("%I" + m_format + " %p") if not int(timeString[0]): timeString = timeString[1:] return timeString
Convert a datetime object representing a time into a human-ready string that can be read, spoken aloud, etc. Args: time (datetime.date): A datetime object to be converted into text. Returns: A string representation of the input time, ignoring any day-related information.
juraj-google-style
def create_mutation_file(self, list_of_tuples): self.mutation_infile = op.join(self.foldx_dir, 'individual_list.txt') idx = 1 with open(self.mutation_infile, 'w') as f: for mutant_group in list_of_tuples: mutstring = ''.join(list(map((lambda x: '{}{}{}{};'.format(x[0], x[1], x[2], x[3]))...
Create the FoldX file 'individual_list.txt' to run BuildModel upon. Args: list_of_tuples (list): A list of tuples indicating mutation groups to carry out BuildModel upon. Example:: [ (('N', 'A', 308, 'S'), ('S', 'A', 320, 'T'), ('S', 'A', 321, 'H')), # Mutation group 1 (('S', 'A', 321, 'R'), ('T', 'A', 345, 'S')) #...
codesearchnet
def get_backend(backend_class=None): cache_name = '_backend_instance' if (not hasattr(get_backend, cache_name)): backend_class = (backend_class or settings.ROUGHPAGES_BACKEND) if isinstance(backend_class, basestring): (module_path, class_name) = backend_class.rsplit('.', 1) ...
Get backend instance If no `backend_class` is specified, the backend class is determined from the value of `settings.ROUGHPAGES_BACKEND`. `backend_class` can be a class object or dots separated python import path Returns: backend instance
codesearchnet
def api_server(api_services, **kwargs): if ('protocols' in kwargs): raise TypeError("__init__() got an unexpected keyword argument 'protocols'") from . import _logger as endpoints_logger from . import __version__ as endpoints_version endpoints_logger.info('Initializing Endpoints Framework versio...
Create an api_server. The primary function of this method is to set up the WSGIApplication instance for the service handlers described by the services passed in. Additionally, it registers each API in ApiConfigRegistry for later use in the BackendService.getApiConfigs() (API config enumeration service). It also config...
codesearchnet
def restore_saveables(self, tensor_saveables, python_positions, registered_savers=None, reader=None): if reader is None: reader = py_checkpoint_reader.NewCheckpointReader(self.save_path_string) restore_ops = [] for position in python_positions: key = position.object_proto.attributes[0].check...
Run or build restore operations for SaveableObjects. Args: tensor_saveables: `SaveableObject`s which correspond to Tensors. python_positions: List of CheckpointPositions bound to `PythonState` objects which must be restored eagerly. registered_savers: a dict mapping saver names-> object name -> Trackable. reader: A `C...
github-repos
def merge_with(self, other): other = as_shape(other) if self._dims is None: return other else: try: self.assert_same_rank(other) new_dims = [] for i, dim in enumerate(self._dims): new_dims.append...
Returns a `TensorShape` combining the information in `self` and `other`. The dimensions in `self` and `other` are merged elementwise, according to the rules defined for `Dimension.merge_with()`. Args: other: Another `TensorShape`. Returns: A `TensorShape` containing the combined information of `self` and `other`. R...
juraj-google-style
def resize_volumes(x, depth_factor, height_factor, width_factor, data_format): if data_format == 'channels_first': output = repeat_elements(x, depth_factor, axis=2) output = repeat_elements(output, height_factor, axis=3) output = repeat_elements(output, width_factor, axis=4) return o...
Resizes the volume contained in a 5D tensor. Args: x: Tensor or variable to resize. depth_factor: Positive integer. height_factor: Positive integer. width_factor: Positive integer. data_format: One of `"channels_first"`, `"channels_last"`. Returns: A tensor. Raises: ValueError: if `data_format` is neither `channels_...
github-repos
def IsRValueAllowed(clean_lines, linenum, typenames): for i in xrange(linenum, 0, -1): line = clean_lines.elided[i] if Match(r'GOOGLE_ALLOW_RVALUE_REFERENCES_(?:PUSH|POP)', line): if not line.endswith('PUSH'): return False for j in xrange(linenum, clean_lines.NumLines(), 1): ...
Check if RValue reference is allowed on a particular line. Args: clean_lines: A CleansedLines instance containing the file. linenum: The number of the line to check. typenames: set of type names from template-argument-list. Returns: True if line is within the region where RValue references are allowed.
juraj-google-style
def __init__(self, name, type, description=''): self._name = name self._type = type self._description = description
Filter constructor. Args: name (str): Filter name. type (str): Type of the filter (boolean, int, etc.). description (str): Filter description.
juraj-google-style
def __init__(self, lat=None, lng=None, name=None, stop_id=None, field_dict=None, stop_code=None): self._schedule = None if field_dict: if isinstance(field_dict, self.__class__): for k, v in field_dict.iteritems(): self.__dict__[k] = v else: ...
Initialize a new Stop object. Args: field_dict: A dictionary mapping attribute name to unicode string lat: a float, ignored when field_dict is present lng: a float, ignored when field_dict is present name: a string, ignored when field_dict is present stop_id: a string, ignored when field_dict is present stop_code: a s...
juraj-google-style
def res_arg(self, ns, types_ns, f_name, name, type_anno, f_is_local): raise NotImplementedError('subclasses must implement')
Resolves the type of a (possibly annotated) function argument. Args: ns: namespace types_ns: types namespace f_name: str, the function name name: str, the argument name type_anno: the type annotating the argument, if any f_is_local: bool, whether the function is a local function Returns: Set of the argument types.
github-repos
def visualize(logdir, outdir, num_agents, num_episodes, checkpoint=None, env_processes=True): config = utility.load_config(logdir) with tf.device('/cpu:0'): batch_env = utility.define_batch_env((lambda : _create_environment(config, outdir)), num_agents, env_processes) graph = utility.define_simu...
Recover checkpoint and render videos from it. Args: logdir: Logging directory of the trained algorithm. outdir: Directory to store rendered videos in. num_agents: Number of environments to simulate in parallel. num_episodes: Total number of episodes to simulate. checkpoint: Checkpoint name to load; defaults to most re...
codesearchnet
def incr(self, counter_name, delta=1): self._state.counters_map.increment(counter_name, delta)
Changes counter by delta. Args: counter_name: the name of the counter to change. str. delta: int.
juraj-google-style
def _comparison_functions(cls, partial=False): def prerelease_cmp(a, b): if a and b: return identifier_list_cmp(a, b) elif a: return -1 elif b: return 1 else: r...
Retrieve comparison methods to apply on version components. This is a private API. Args: partial (bool): whether to provide 'partial' or 'strict' matching. Returns: 5-tuple of cmp-like functions.
juraj-google-style
def _process(self, input): input = re.sub("<[^>]*>", " ", input) punct = list(string.punctuation) for symbol in punct: input = input.replace(symbol, " %s " % symbol) input = filter(lambda x: x != u'', input.lower().split(' ')) return input
Takes in html-mixed body text as a string and returns a list of strings, lower case and with punctuation given spacing. Called by self._gen_sentence() Args: inpnut (string): body text
juraj-google-style
async def get_event(self, stream: str, event_number: int, resolve_links=True, require_master=False, correlation_id: uuid.UUID=None) -> msg.Event: correlation_id = (correlation_id or uuid.uuid4()) cmd = convo.ReadEvent(stream, event_number, resolve_links, require_master, conversation_id=correlation_id) resul...
Get a single event by stream and event number. Args: stream: The name of the stream containing the event. event_number: The sequence number of the event to read. resolve_links (optional): True if eventstore should automatically resolve Link Events, otherwise False. required_master (optional): True if this command must...
codesearchnet
def visit_comparison(self, comparison: _evaluation.ComparisonNode) -> _sql_data_types.Select: lhs_result = self.visit(comparison.left) rhs_result = self.visit(comparison.right) lhs_subquery = lhs_result.as_operand() rhs_subquery = rhs_result.as_operand() sql_value = f'{lhs_subquery} {comparison.op} ...
Translates a FHIRPath comparison to Spark SQL. Each operand is expected to be a collection of a single element. Operands can be strings, integers, decimals, dates, datetimes, and times. Comparison will perform implicit conversion between applicable types. Args: comparison: The `Comparison` Expression node. Returns: ...
github-repos
def _psum(tensor, axis_name=None): if axis_name != _pmap_config.axis_name(): raise ValueError('axis_name (%s) is not equal to that of the surrounding pmap (%s)' % (axis_name, _pmap_config.axis_name())) devices = _pmap_config.devices() if devices is None: raise ValueError("Can't retrieve the ...
Sum all-reduction. Args: tensor: A tensor. axis_name: The axis name to reduce. Must equal to that of the surrounding pmap. Returns: The sum of the `tensor` replicas on each participating devices.
github-repos
def add_arguments(self, parser): group = parser.add_mutually_exclusive_group(required=True) group.add_argument('-d', '--downgrade', action='store_true', help='downgrade the J-Link firmware') group.add_argument('-u', '--upgrade', action='store_true', ...
Adds the arguments for the firmware command. Args: self (FirmwareCommand): the ``FirmwareCommand`` instance parser (argparse.ArgumentParser): parser to add the commands to Returns: ``None``
juraj-google-style
def find_log_dir(log_dir=None): if log_dir: dirs = [log_dir] elif FLAGS['log_dir'].value: dirs = [FLAGS['log_dir'].value] else: dirs = ['/tmp/', './'] for d in dirs: if os.path.isdir(d) and os.access(d, os.W_OK): return d _absl_logger.fatal("Can't find a writable...
Returns the most suitable directory to put log files into. Args: log_dir: str|None, if specified, the logfile(s) will be created in that directory. Otherwise if the --log_dir command-line flag is provided, the logfile will be created in that directory. Otherwise the logfile will be created in a standard location.
juraj-google-style
def min(self, axis=None, skipna=None, level=None, numeric_only=None, **kwargs): axis = self._get_axis_number(axis) if axis is not None else 0 data = self._validate_dtypes_min_max(axis, numeric_only) return data._reduce_dimension( data._query_compiler.min( axi...
Perform min across the DataFrame. Args: axis (int): The axis to take the min on. skipna (bool): True to skip NA values, false otherwise. Returns: The min of the DataFrame.
juraj-google-style
def atomic_write_string_to_file(filename, contents, overwrite): temp_pathname = ((tf.compat.as_bytes(filename) + tf.compat.as_bytes('.tmp')) + tf.compat.as_bytes(uuid.uuid4().hex)) with tf_v1.gfile.GFile(temp_pathname, mode='w') as f: f.write(contents) try: tf_v1.gfile.Rename(temp_pathname, ...
Writes to `filename` atomically. This means that when `filename` appears in the filesystem, it will contain all of `contents`. With write_string_to_file, it is possible for the file to appear in the filesystem with `contents` only partially written. Accomplished by writing to a temp file and then renaming it. Args: ...
codesearchnet
def push_file(self, source, dest_dir): local_dest = ((dest_dir + '/') + os.path.basename(source)) if (os.path.dirname(source) != dest_dir): try: shutil.copyfile(source, local_dest) os.chmod(local_dest, 511) except OSError as e: raise FileCopyException(e, self....
If the source files dirpath is the same as dest_dir, a copy is not necessary, and nothing is done. Else a copy is made. Args: - source (string) : Path to the source file - dest_dir (string) : Path to the directory to which the files is to be copied Returns: - destination_path (String) : Absolute path of the destinati...
codesearchnet
def add_subassistants_to(cls, parser, assistant_tuple, level, alias=None): name = (alias or assistant_tuple[0].name) p = parser.add_parser(name, description=assistant_tuple[0].description, argument_default=argparse.SUPPRESS) for arg in assistant_tuple[0].args: arg.add_argument_to(p) if (len(assi...
Adds assistant from given part of assistant tree and all its subassistants to a given argument parser. Args: parser: instance of devassistant_argparse.ArgumentParser assistant_tuple: part of assistant tree (see generate_argument_parser doc) level: level of subassistants that given assistant is at
codesearchnet
def get_schema_node(self, path: SchemaPath) -> Optional[SchemaNode]: return self.schema.get_schema_descendant(self.schema_data.path2route(path))
Return the schema node addressed by a schema path. Args: path: Schema path. Returns: Schema node if found in the schema, or ``None``. Raises: InvalidSchemaPath: If the schema path is invalid.
codesearchnet
def _create(cls, user_agent=None, user_agent_config_yaml=None, user_agent_lookup=None, **kwargs): kwargs = UserAgent._environment_variables(**kwargs) if ('user_agent' in kwargs): user_agent = kwargs['user_agent'] del kwargs['user_agent'] prefix = kwargs.get('prefix') if prefix: d...
Get full user agent string Args: user_agent (Optional[str]): User agent string. HDXPythonLibrary/X.X.X- is prefixed. user_agent_config_yaml (Optional[str]): Path to YAML user agent configuration. Ignored if user_agent supplied. Defaults to ~/.useragent.yml. user_agent_lookup (Optional[str]): Lookup key for YAML. Ignor...
codesearchnet
def connect(self): if self.is_connected(): raise tornado.gen.Return(True) cb1 = self._read_callback cb2 = self._close_callback self.__callback_queue = collections.deque() self._reply_list = [] self.__reader = hiredis.Reader(replyError=ClientError) kwargs = self.connection_kwargs ...
Connects the client object to redis. It's safe to use this method even if you are already connected. Note: this method is useless with autoconnect mode (default). Returns: a Future object with True as result if the connection was ok.
codesearchnet
def get_regularization_loss(scope=None, name='total_regularization_loss'): losses = get_regularization_losses(scope) if losses: return math_ops.add_n(losses, name=name) else: return constant_op.constant(0.0)
Gets the total regularization loss. Args: scope: An optional scope name for filtering the losses to return. name: The name of the returned tensor. Returns: A scalar regularization loss.
github-repos
def restore_saveables(self, tensor_saveables: Dict[str, saveable_object.SaveableObject], python_positions: List[restore_lib.CheckpointPosition], registered_savers: Optional[Dict[str, Dict[str, base.Trackable]]]=None, reader: py_checkpoint_reader.NewCheckpointReader=None) -> Optional[List[ops.Operation]]: del regist...
Run or build restore operations for SaveableObjects. Args: tensor_saveables: `SaveableObject`s which correspond to Tensors. python_positions: `CheckpointPosition`s which correspond to `PythonState` Trackables bound to the checkpoint. registered_savers: a dict mapping saver names-> object name -> Trackable. This argume...
github-repos
def set_targets(x, delta=10): data = [] for (row, _) in x.iterrows(): if (row == (x.shape[0] - 1)): break curr_close = x.close[row] next_close = x.close[(row + 1)] high_close = (next_close + (delta / 2)) low_close = (next_close - (delta / 2)) if (curr_...
Sets target market trend for a date Args: x: Pandas DataFrame of market features delta: Positive number defining a price buffer between what is classified as a bullish/bearish market for the training set. delta is equivalent to the total size of the neutral price zone. delta / 2 is equivalent to either the positive or...
codesearchnet
def scan(self, func=operator.add): if self.closed(): raise ValueError('Attempt to call scan() on a closed Queryable.') if (not is_callable(func)): raise TypeError('scan() parameter func={0} is not callable'.format(repr(func))) return self._create(self._generate_scan_result(func))
An inclusive prefix sum which returns the cumulative application of the supplied function up to an including the current element. Args: func: An optional binary function which is commutative - that is, the order of the arguments is unimportant. Defaults to a summing operator. Returns: A Queryable such that the nth e...
codesearchnet
def all_elements_equal(value): if is_scalar(value): return True return np.array((value == value.flatten()[0])).all()
Checks if all elements in the given value are equal to each other. If the input is a single value the result is trivial. If not, we compare all the values to see if they are exactly the same. Args: value (ndarray or number): a numpy array or a single number. Returns: bool: true if all elements are equal to each othe...
codesearchnet
def _wait_for_any_event(events, timeout_s): def any_event_set(): return any((event.is_set() for event in events)) result = timeouts.loop_until_timeout_or_true(timeout_s, any_event_set, sleep_s=_WAIT_FOR_ANY_EVENT_POLL_S) return (result or any_event_set())
Wait for any in a list of threading.Event's to be set. Args: events: List of threading.Event's. timeout_s: Max duration in seconds to wait before returning. Returns: True if at least one event was set before the timeout expired, else False.
codesearchnet
def _ParseGUIDTable(self, parser_mediator, cache, database, esedb_table, values_map, event_data_class): if (cache is None): raise ValueError('Missing cache value.') if (database is None): raise ValueError('Missing database value.') if (esedb_table is None): raise ValueError('Missing ...
Parses a table with a GUID as name. Args: parser_mediator (ParserMediator): mediates interactions between parsers and other components, such as storage and dfvfs. cache (ESEDBCache): cache, which contains information about the identifiers stored in the SruDbIdMapTable table. database (pyesedb.file): ESE database. esed...
codesearchnet
def diff(self, periods=1, axis=0): axis = self._get_axis_number(axis) return self.__constructor__( query_compiler=self._query_compiler.diff(periods=periods, axis=axis) )
Finds the difference between elements on the axis requested Args: periods: Periods to shift for forming difference axis: Take difference over rows or columns Returns: DataFrame with the diff applied
juraj-google-style
def _ParseEventData(self, variable_length_section): event_data = WinJobEventData() event_data.application = ( variable_length_section.application_name.rstrip('\x00')) event_data.comment = variable_length_section.comment.rstrip('\x00') event_data.parameters = ( variable_length_sectio...
Parses the event data form a variable-length data section. Args: variable_length_section (job_variable_length_data_section): a Windows Scheduled Task job variable-length data section. Returns: WinJobEventData: event data of the job file.
juraj-google-style
def ExtractEvents(self, parser_mediator, registry_key, **kwargs): shutdown_value = registry_key.GetValueByName('ShutdownTime') if (not shutdown_value): return try: date_time = self._ParseFiletime(shutdown_value.data) except errors.ParseError as exception: parser_mediator.ProduceE...
Extracts events from a ShutdownTime Windows Registry value. Args: parser_mediator (ParserMediator): mediates interactions between parsers and other components, such as storage and dfvfs. registry_key (dfwinreg.WinRegistryKey): Windows Registry key.
codesearchnet
def _load_metadata_files(self): metadata_paths = file_io.get_matching_files(os.path.join(self._dump_root, '*%s' % self._METADATA_SUFFIX)) if not metadata_paths: raise ValueError('Cannot find any tfdbg metadata file in directory: %s' % self._dump_root) wall_times = [] run_ids = [] tensorflow_...
Load and parse metadata files in the dump root. Check that all metadata files have a common tfdbg_run_id, and raise a ValueError if their tfdbg_run_ids differ. Returns: A list of metadata file paths in ascending order of their starting wall_time timestamp.
github-repos
def map_across_blocks(self, map_func): preprocessed_map_func = self.preprocess_func(map_func) new_partitions = np.array( [ [part.apply(preprocessed_map_func) for part in row_of_parts] for row_of_parts in self.partitions ] ) ...
Applies `map_func` to every partition. Args: map_func: The function to apply. Returns: A new BaseFrameManager object, the type of object that called this.
juraj-google-style
def cmRecall(cm, average=True): cm = cm.type(torch.float64) recall = cm.diag() / (cm.sum(dim=1) + 1e-15) if average: return recall.mean() return recall
Calculates recall using :class:`~ignite.metrics.ConfusionMatrix` metric. Args: cm (ConfusionMatrix): instance of confusion matrix metric average (bool, optional): if True metric value is averaged over all classes Returns: MetricsLambda
juraj-google-style
def SmartBroadcastGradientArgs(x, y, grad=None): del grad x_shape = array_ops.shape(x) y_shape = array_ops.shape(y) if not context.executing_eagerly() and isinstance(x, tensor.Tensor) and isinstance(y, tensor.Tensor): x_axes, y_axes = _InferGradientReductionAxes(x.shape, y.shape) else: ...
Version of `BroadcastGradientArgs` optimized for partially-known shapes. Args: x: The first argument of a broadcasting binary op. y: The second argument of a broadcasting binary op. grad: Deprecated. Returns: A pair of triples, one per argument with * Shape of the argument (tensor); * Reduction axes for the argument ...
github-repos
def _remove_outliers_from_hist(hist: Hist, outliers_start_index: int, outliers_removal_axis: OutliersRemovalAxis) -> None: if (outliers_start_index > 0): x = ctypes.c_int(0) y = ctypes.c_int(0) z = ctypes.c_int(0) outliers_removal_axis_values: Dict[(OutliersRemovalAxis, ctypes.c_int)...
Remove outliers from a given histogram. Args: hist: Histogram to check for outliers. outliers_start_index: Index in the truth axis where outliers begin. outliers_removal_axis: Axis along which outliers removal will be performed. Usually the particle level aixs. Returns: None. The histogram is modified in place.
codesearchnet
def site_occupation_statistics(self): if (self.time == 0.0): return None occupation_stats = {label: 0.0 for label in self.site_labels} for site in self.sites: occupation_stats[site.label] += site.time_occupied for label in self.site_labels: occupation_stats[label] /= self.time ...
Average site occupation for each site type Args: None Returns: (Dict(Str:Float)): Dictionary of occupation statistics, e.g.:: { 'A' : 2.5, 'B' : 25.3 }
codesearchnet
def combine(a1, a2): if (not isinstance(a1, list)): a1 = [a1] if (not isinstance(a2, list)): a2 = [a2] return (a1 + a2)
Combine to argument into a single flat list It is used when you are not sure whether arguments are lists but want to combine them into one flat list Args: a1: list or other thing a2: list or other thing Returns: list: a flat list contain a1 and a2
codesearchnet
def get_common_properties(root): properties = {} for elem in root.iterfind('commonProperties/property'): name = elem.attrib['name'] if name == 'initial composition': properties['composition'] = {'species': [], 'kind': None} for child in elem.iter('component'): ...
Read common properties from root of ReSpecTh XML file. Args: root (`~xml.etree.ElementTree.Element`): Root of ReSpecTh XML file Returns: properties (`dict`): Dictionary with common properties
juraj-google-style
def convert_flatten(params, w_name, scope_name, inputs, layers, weights, names): print('Converting flatten ...') if names == 'short': tf_name = 'R' + random_string(7) elif names == 'keep': tf_name = w_name else: tf_name = w_name + str(random.random()) reshape = keras.l...
Convert reshape(view). Args: params: dictionary with layer parameters w_name: name prefix in state_dict scope_name: pytorch scope name inputs: pytorch node inputs layers: dictionary with keras tensors weights: pytorch state_dict names: use short names for keras layers
juraj-google-style
def __message_to_schema(self, message_type): name = self.__normalized_name(message_type) schema = {'id': name, 'type': 'object'} if message_type.__doc__: schema['description'] = message_type.__doc__ properties = {} for field in message_type.all_fields(): descriptor = {} type_...
Parse a single message into JSON Schema. Will recursively descend the message structure and also parse other messages references via MessageFields. Args: message_type: protorpc.messages.Message class to parse. Returns: An object representation of the schema.
codesearchnet
def write(self, ostream, kmip_version=enums.KMIPVersion.KMIP_1_0): tstream = BytearrayStream() self.revocation_code.write(tstream, kmip_version=kmip_version) if self.revocation_message is not None: self.revocation_message.write(tstream, kmip_version=kmip_version) ...
Write the data encoding the RevocationReason object to a stream. Args: ostream (Stream): A data stream in which to encode object data, supporting a write method; usually a BytearrayStream object. kmip_version (KMIPVersion): An enumeration defining the KMIP version with which the object will be encoded. Optional, defau...
juraj-google-style
def start_reporter(redis_address, stdout_file=None, stderr_file=None, redis_password=None): reporter_filepath = os.path.join(os.path.dirname(os.path.abspath(__file__)), 'reporter.py') command = [sys.executable, '-u', reporter_filepath, '--redis-address={}'.format(redis_address)] if redis_password: c...
Start a reporter process. Args: redis_address (str): The address of the Redis instance. stdout_file: A file handle opened for writing to redirect stdout to. If no redirection should happen, then this should be None. stderr_file: A file handle opened for writing to redirect stderr to. If no redirection should happen, t...
codesearchnet
def _MergeIdenticalCaseInsensitive(self, a, b): if a.lower() != b.lower(): raise MergeError("values must be the same (case insensitive) " "('%s' vs '%s')" % (transitfeed.EncodeUnicode(a), transitfeed.EncodeUnicode(b))) return b
Tries to merge two strings. The string are required to be the same ignoring case. The second string is always used as the merged value. Args: a: The first string. b: The second string. Returns: The merged string. This is equal to the second string. Raises: MergeError: The strings were not the same ignoring case.
juraj-google-style
def add(self, other): if isinstance(other, SeriesWeld): other = other.expr return SeriesWeld( grizzly_impl.element_wise_op( self.expr, other, "+", self.weld_type ), self.weld_type, ...
Summary Args: other (TYPE): Description Returns: TYPE: Description
juraj-google-style
def get_feature_variable_boolean(self, feature_key, variable_key, user_id, attributes=None): variable_type = entities.Variable.Type.BOOLEAN return self._get_feature_variable_for_type(feature_key, variable_key, variable_type, user_id, attributes)
Returns value for a certain boolean variable attached to a feature flag. Args: feature_key: Key of the feature whose variable's value is being accessed. variable_key: Key of the variable whose value is to be accessed. user_id: ID for user. attributes: Dict representing user attributes. Returns: Boolean value of the v...
codesearchnet
def center_of_mass(self, time): if self.start_time <= time <= self.end_time: diff = time - self.start_time valid = np.flatnonzero(self.masks[diff] != 0) if valid.size > 0: com_x = 1.0 / self.timesteps[diff].ravel()[valid].sum() * np.sum(self.timesteps...
Calculate the center of mass at a given timestep. Args: time: Time at which the center of mass calculation is performed Returns: The x- and y-coordinates of the center of mass.
juraj-google-style
def dict_to_csv(orig_dict, file_name, field_names_tuple, file_location): file = __os.path.join(file_location, file_name) csv_write = open(file, 'a') writer = __csv.DictWriter(csv_write, fieldnames=field_names_tuple, lineterminator='\n') headers = dict((n, n) for n in field_names_tuple) writer.w...
Function to export a dictionary to a csv file Args: orig_dict: The dictionary you want exported file_name: The name of the exported file field_names_tuple: The fieldnames in a tuple file_location: The location of the file, derive from the os module Returns: returns the filename info
juraj-google-style
def controlled_by(self, *control_qubits: Qid) -> 'Gate': from cirq.ops import ControlledGate return ControlledGate(self, control_qubits, len(control_qubits) if control_qubits is not None else 1)
Returns a controlled version of this gate. Args: control_qubits: Optional qubits to control the gate by.
juraj-google-style
def ls(root='.', abspaths=False, recursive=False): def _expand_subdirs(file): if isdir(path(root, file)): return ([file] + [path(file, x) for x in ls(path(root, file), recursive=True)]) else: return [file] if isfile(root): return ([abspath(root)] if abspaths else...
Return a list of files in directory. Directory listings are sorted alphabetically. If the named directory is a file, return it's path. Examples: >>> fs.ls("foo") ["a", "b", "c"] >>> fs.ls("foo/a") ["foo/a"] >>> fs.ls("foo", abspaths=True) ["/home/test/foo/a", "/home/test/foo/b", "/home/test/foo/c"] >>> fs.ls("foo...
codesearchnet
def _add_genetic_models(self, variant_obj, info_dict): genetic_models_entry = info_dict.get('GeneticModels') if genetic_models_entry: genetic_models = [] for family_annotation in genetic_models_entry.split(','): for genetic_model in family_annotation.spli...
Add the genetic models found Args: variant_obj (puzzle.models.Variant) info_dict (dict): A info dictionary
juraj-google-style
def get(self, block_id): pool = current_app.config['bigchain_pool'] with pool() as bigchain: block = bigchain.get_block(block_id=block_id) if (not block): return make_error(404) return block
API endpoint to get details about a block. Args: block_id (str): the id of the block. Return: A JSON string containing the data about the block.
codesearchnet
def __init__(self, uri='http: try: self.graph_db = neo4j.GraphDatabaseService(uri) version = self.graph_db.neo4j_version print '\t- Neo4j GraphDB connected: %s %s' % (str(uri), version) except packages.httpstream.http.SocketError: ...
Initialization for NeoDB indexer. Args: uri: The uri to connect NeoDB. Raises: RuntimeError: When connection to NeoDB failed.
juraj-google-style
def project(self, project, entity=None): query = gql() return self.gql(query, variable_values={ 'entity': entity, 'project': project})['model']
Retrive project Args: project (str): The project to get details for entity (str, optional): The entity to scope this project to. Returns: [{"id","name","repo","dockerImage","description"}]
juraj-google-style
def format_params_diff(parameter_diff): params_output = '\n'.join([line for v in parameter_diff for line in v.changes()]) return % params_output
Handles the formatting of differences in parameters. Args: parameter_diff (list): A list of DictValues detailing the differences between two dicts returned by :func:`stacker.actions.diff.diff_dictionaries` Returns: string: A formatted string that represents a parameter diff
juraj-google-style
def imwrite(img, file_path, params=None, auto_mkdir=True): if auto_mkdir: dir_name = osp.abspath(osp.dirname(file_path)) mkdir_or_exist(dir_name) return cv2.imwrite(file_path, img, params)
Write image to file Args: img (ndarray): Image array to be written. file_path (str): Image file path. params (None or list): Same as opencv's :func:`imwrite` interface. auto_mkdir (bool): If the parent folder of `file_path` does not exist, whether to create it automatically. Returns: bool: Successful or not.
juraj-google-style
def loop_until_timeout_or_not_none(timeout_s, function, sleep_s=1): return loop_until_timeout_or_valid( timeout_s, function, lambda x: x is not None, sleep_s)
Loops until the specified function returns non-None or until a timeout. Args: timeout_s: The number of seconds to wait until a timeout condition is reached. As a convenience, this accepts None to mean never timeout. Can also be passed a PolledTimeout object instead of an integer. function: The function to call each i...
juraj-google-style
def update(self, other, **kwargs): assert isinstance( other, type(self) ), "Must have the same DataManager subclass to perform this operation" def update_builder(df, other, **kwargs): df = df.copy() df.update(other, **kwargs) ...
Uses other manager to update corresponding values in this manager. Args: other: The other manager. Returns: New DataManager with updated data and index.
juraj-google-style
def compare_files(path1, path2): diff = difflib.ndiff(open(path1).readlines(), open(path2).readlines()) return [x for x in diff if x[0] in ['-', '+', '?']]
Returns the delta between two files using -, ?, + format excluding lines that are the same Args: path1 (str): Path to first file path2 (str): Path to second file Returns: List[str]: Delta between the two files
juraj-google-style
def load_data(path, dense=False): catalog = {'.csv': load_csv, '.sps': load_svmlight_file, '.h5': load_hdf5} ext = os.path.splitext(path)[1] func = catalog[ext] (X, y) = func(path) if (dense and sparse.issparse(X)): X = X.todense() return (X, y)
Load data from a CSV, LibSVM or HDF5 file based on the file extension. Args: path (str): A path to the CSV, LibSVM or HDF5 format file containing data. dense (boolean): An optional variable indicating if the return matrix should be dense. By default, it is false. Returns: Data matrix X and target vector y
codesearchnet
def validate_string(string, options=None): output.info("Performing JSON schema validation on input string: " + string) stream = io.StringIO(string) return validate(stream, options)
Validate the input `string` according to the options passed in. If any exceptions are raised during validation, no further validation will take place. Args: string: The string containing the JSON to be validated. options: An instance of ``ValidationOptions``. Returns: An ObjectValidationResults instance, or a list o...
juraj-google-style