cactus_bundle00000_intra_mcdc: the intra-axonal pool of bundle 00000 walked by MC/DC 1.50, strand by strand, as a replay pack (the three-engine comparison of the replayable-MC paper)
Browse files- .gitattributes +1 -0
- README.md +2 -0
- manifest.json +213 -0
- packs/cactus_bundle00000_intra_mcdc.rpk +3 -0
.gitattributes
CHANGED
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@@ -62,3 +62,4 @@ packs/single_bundle_100ms_xframe.rpk filter=lfs diff=lfs merge=lfs -text
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packs/swoop_1s_c3_seg125ms.rpk filter=lfs diff=lfs merge=lfs -text
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packs/single_bundle_1s_c3_seg125ms.rpk filter=lfs diff=lfs merge=lfs -text
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packs/cactus_bundle00000_intra_mcmrsimulator.rpk filter=lfs diff=lfs merge=lfs -text
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packs/swoop_1s_c3_seg125ms.rpk filter=lfs diff=lfs merge=lfs -text
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packs/single_bundle_1s_c3_seg125ms.rpk filter=lfs diff=lfs merge=lfs -text
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| 64 |
packs/cactus_bundle00000_intra_mcmrsimulator.rpk filter=lfs diff=lfs merge=lfs -text
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+
packs/cactus_bundle00000_intra_mcdc.rpk filter=lfs diff=lfs merge=lfs -text
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README.md
CHANGED
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@@ -26,8 +26,10 @@ Replay packs (`.rpk`) built with `dmipy_sim`: one converged Monte-Carlo walk eac
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|---|---|---|---|---|---|---|---|---|
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| `cactus/single-bundle-1s-c3-seg125ms` | 1000 ms (8 × 125 ms, 472.0 MB/window) | 100000 | 320 | positions, boundary_local_time, compartment, susceptibility_grid, susceptibility_path | 0.0266 | 3.8 GB | — | `packs/single_bundle_1s_c3_seg125ms.rpk` |
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| `cactus/bundle00000-intra-k184/mcmrsimulator` | 100 ms | 40678 | 88 | positions, compartment | 0.00919 | 44.7 MB | built 0267d5ee, published 013afa3d | `packs/cactus_bundle00000_intra_mcmrsimulator.rpk` |
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## Citation
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| 31 |
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| 32 |
* Villarreal-Haro et al. 2023, CACTUS (https://github.com/Juanitovh/CACTUS); walk: Cottaar M. et al. (2026) MCMRSimulator.jl, MCMRSimulator.jl 1.1.0
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| 33 |
* Villarreal-Haro et al., CACTUS; dmipy-sim#285, #528
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|---|---|---|---|---|---|---|---|---|
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| `cactus/single-bundle-1s-c3-seg125ms` | 1000 ms (8 × 125 ms, 472.0 MB/window) | 100000 | 320 | positions, boundary_local_time, compartment, susceptibility_grid, susceptibility_path | 0.0266 | 3.8 GB | — | `packs/single_bundle_1s_c3_seg125ms.rpk` |
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| 28 |
| `cactus/bundle00000-intra-k184/mcmrsimulator` | 100 ms | 40678 | 88 | positions, compartment | 0.00919 | 44.7 MB | built 0267d5ee, published 013afa3d | `packs/cactus_bundle00000_intra_mcmrsimulator.rpk` |
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| 29 |
+
| `cactus/bundle00000-intra-k184/mcdc` | 100 ms | 40678 | 88 | positions, compartment | 0.00786 | 44.7 MB | built 0267d5ee, published 013afa3d | `packs/cactus_bundle00000_intra_mcdc.rpk` |
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| 30 |
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| 31 |
## Citation
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| 32 |
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| 33 |
* Villarreal-Haro et al. 2023, CACTUS (https://github.com/Juanitovh/CACTUS); walk: Cottaar M. et al. (2026) MCMRSimulator.jl, MCMRSimulator.jl 1.1.0
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| 34 |
+
* Villarreal-Haro et al. 2023, CACTUS (https://github.com/Juanitovh/CACTUS); walk: Rafael-Patino J. et al. (2020) Robust Monte-Carlo simulations in diffusion-MRI, Front. Neuroinform., MC/DC Simulator 1.50.000 (src/constants.h VERSION_ID)
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* Villarreal-Haro et al., CACTUS; dmipy-sim#285, #528
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manifest.json
CHANGED
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@@ -260,6 +260,219 @@
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}
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}
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}
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| 264 |
],
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| 265 |
"substrate": {
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| 260 |
}
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| 261 |
]
|
| 262 |
}
|
| 263 |
+
},
|
| 264 |
+
{
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"id": "cactus/bundle00000-intra-k184/mcdc",
|
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"path": "packs/cactus_bundle00000_intra_mcdc.rpk",
|
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"sha256": "096350abd47599304a15f76f1c4350db0d623ec62e378d4d8c73f91eec05a872",
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"bytes": 44673174,
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"n_walkers": 40678,
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"T_max": 0.1,
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"dt_traj": 3.6845983787767136e-05,
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"K": 88,
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| 273 |
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"method": "bridge_dst",
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"temporal_bandwidth_hz": 440.0,
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| 275 |
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"channels": [
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"positions",
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"compartment"
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],
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"floor_max": 0.0078608,
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"err_max": 0.000151513,
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"within_2x_floor": true,
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"built_commit": "0267d5ee9ce97fb8be6e0e9e304f3d8dcf9ed6f8",
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"published_commit": "013afa3de5fe46a0b687390700e6d514499ee574",
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| 284 |
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"license": "CC-BY-4.0",
|
| 285 |
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"citation": "Villarreal-Haro et al. 2023, CACTUS (https://github.com/Juanitovh/CACTUS); walk: Rafael-Patino J. et al. (2020) Robust Monte-Carlo simulations in diffusion-MRI, Front. Neuroinform., MC/DC Simulator 1.50.000 (src/constants.h VERSION_ID)",
|
| 286 |
+
"substrate": "cactus/cactus_bundle_00000/intra-k184",
|
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"segments": {
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"n": 1,
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"n_t": 2715,
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"T": 0.1,
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"walks": [
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{
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"first": 0,
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}
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}
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],
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"substrate": {
|
packs/cactus_bundle00000_intra_mcdc.rpk
ADDED
|
@@ -0,0 +1,3 @@
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|
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| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:096350abd47599304a15f76f1c4350db0d623ec62e378d4d8c73f91eec05a872
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| 3 |
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size 44673174
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