test-fixtures / README.md
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tessera: packs/cylinder-r5p5um-T50ms.rpk (pack c95df317b101)
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metadata
license: cc-by-4.0
pretty_name: test-fixtures

SubstrateCommons/test-fixtures

Replay packs (.rpk) built with dmipy_sim: one converged Monte-Carlo walk each, stored so any acquisition can be replayed on it. Load one with ReplayPack.load("hf://SubstrateCommons/test-fixtures/<path>"); the manifest (manifest.json) holds the sha256 every load is checked against. This file is rendered from the manifest by dmipy_sim.replay.publish.

Substrate

analytic/cylinder

  • box: 24 × 24 × 24 µm
  • boundary: open, open, open
pool D (m²/s) water fraction
extra 2e-09 0
intra 2e-09 1

Packs

id duration walkers bands channels floor size commit path
cylinder-r3um-T60ms 60 ms 80000 16 positions, boundary_local_time, compartment 0.018 19.6 MB — packs/cylinder-r3um-T60ms.rpk
cylinder-r4um-T50ms 50 ms 60000 16 positions, boundary_local_time, compartment 0.0158 14.7 MB — packs/cylinder-r4um-T50ms.rpk
cylinder-r4p5um-T50ms 50 ms 380000 16 positions, boundary_local_time, compartment 0.0199 93.1 MB — packs/cylinder-r4p5um-T50ms.rpk
cylinder-r5p5um-T50ms 50 ms 100000 16 positions, boundary_local_time, compartment 0.0157 24.5 MB — packs/cylinder-r5p5um-T50ms.rpk

Citation

  • Fick R., dmrai-lab. tessera test fixture: impermeable 3 um cylinder, D 2e-9 m^2/s, 60 ms walk (dmipy-sim de8590b).
  • Fick R., dmrai-lab. tessera test fixture: impermeable 4 um cylinder, D 2e-9 m^2/s, 50 ms walk (dmipy-sim de8590b).
  • Fick R., dmrai-lab. tessera test fixture: impermeable 4.5 um cylinder, D 2e-9 m^2/s, 50 ms walk (dmipy-sim de8590b).
  • Fick R., dmrai-lab. tessera test fixture: impermeable 5.5 um cylinder, D 2e-9 m^2/s, 50 ms walk (dmipy-sim 32df653, CUDA backend).