| dataset_info: | |
| features: | |
| - name: A | |
| dtype: string | |
| - name: B | |
| dtype: string | |
| - name: SeqA | |
| dtype: string | |
| - name: SeqB | |
| dtype: string | |
| - name: OrgA | |
| dtype: string | |
| - name: OrgB | |
| dtype: string | |
| splits: | |
| - name: combined | |
| num_bytes: 5070808 | |
| num_examples: 6242 | |
| - name: combined_stringent | |
| num_bytes: 4663902 | |
| num_examples: 5846 | |
| - name: manual | |
| num_bytes: 2521732 | |
| num_examples: 2150 | |
| - name: manual_stringent | |
| num_bytes: 2298975 | |
| num_examples: 1970 | |
| - name: pdb | |
| num_bytes: 2572332 | |
| num_examples: 4128 | |
| - name: pdb_stringent | |
| num_bytes: 2375069 | |
| num_examples: 3892 | |
| download_size: 7482698 | |
| dataset_size: 19502818 | |
| configs: | |
| - config_name: default | |
| data_files: | |
| - split: combined | |
| path: data/combined-* | |
| - split: combined_stringent | |
| path: data/combined_stringent-* | |
| - split: manual | |
| path: data/manual-* | |
| - split: manual_stringent | |
| path: data/manual_stringent-* | |
| - split: pdb | |
| path: data/pdb-* | |
| - split: pdb_stringent | |
| path: data/pdb_stringent-* | |
| # Non-interacting protein pairs from NEGATOME2.0 | |
| [Website](https://mips.helmholtz-muenchen.de/proj/ppi/negatome/) | |
| [Paper](https://pmc.ncbi.nlm.nih.gov/articles/PMC3965096/) | |
| We map Uniprot ids with the [ID mapping tool](https://www.uniprot.org/id-mapping) and record entires in which both sequences are found. PFAM entires are ommitted. | |
| Each split corresponds to a section of the dataset, labeled the same as the image below: | |
|  | |
| Please cite their paper if you use this dataset in your work | |
| ``` | |
| @article{Blohm2013, | |
| title = {Negatome 2.0: a database of non-interacting proteins derived by literature mining, manual annotation and protein structure analysis}, | |
| volume = {42}, | |
| ISSN = {1362-4962}, | |
| url = {http://dx.doi.org/10.1093/nar/gkt1079}, | |
| DOI = {10.1093/nar/gkt1079}, | |
| number = {D1}, | |
| journal = {Nucleic Acids Research}, | |
| publisher = {Oxford University Press (OUP)}, | |
| author = {Blohm, Philipp and Frishman, Goar and Smialowski, Pawel and Goebels, Florian and Wachinger, Benedikt and Ruepp, Andreas and Frishman, Dmitrij}, | |
| year = {2013}, | |
| month = nov, | |
| pages = {D396–D400} | |
| } | |
| ``` | |