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The dataset generation failed
Error code: DatasetGenerationError
Exception: ArrowInvalid
Message: offset overflow while concatenating arrays
Traceback: Traceback (most recent call last):
File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1858, in _prepare_split_single
num_examples, num_bytes = writer.finalize()
~~~~~~~~~~~~~~~^^
File "/usr/local/lib/python3.14/site-packages/datasets/arrow_writer.py", line 781, in finalize
self.write_rows_on_file()
~~~~~~~~~~~~~~~~~~~~~~~^^
File "/usr/local/lib/python3.14/site-packages/datasets/arrow_writer.py", line 663, in write_rows_on_file
self._write_table(table)
~~~~~~~~~~~~~~~~~^^^^^^^
File "/usr/local/lib/python3.14/site-packages/datasets/arrow_writer.py", line 772, in _write_table
pa_table = pa_table.combine_chunks()
File "pyarrow/table.pxi", line 4557, in pyarrow.lib.Table.combine_chunks
File "pyarrow/error.pxi", line 155, in pyarrow.lib.pyarrow_internal_check_status
return check_status(status)
File "pyarrow/error.pxi", line 92, in pyarrow.lib.check_status
raise convert_status(status)
pyarrow.lib.ArrowInvalid: offset overflow while concatenating arrays
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1369, in compute_config_parquet_and_info_response
parquet_operations, partial, estimated_dataset_info = stream_convert_to_parquet(
~~~~~~~~~~~~~~~~~~~~~~~~~^
builder, max_dataset_size_bytes=max_dataset_size_bytes
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
)
^
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 948, in stream_convert_to_parquet
builder._prepare_split(split_generator=splits_generators[split], file_format="parquet")
~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1683, in _prepare_split
for job_id, done, content in self._prepare_split_single(
~~~~~~~~~~~~~~~~~~~~~~~~~~^
gen_kwargs=gen_kwargs, job_id=job_id, **_prepare_split_args
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
):
^
File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1869, in _prepare_split_single
raise DatasetGenerationError("An error occurred while generating the dataset") from e
datasets.exceptions.DatasetGenerationError: An error occurred while generating the datasetNeed help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.
batch int64 | articles list |
|---|---|
14 | [{"pmcid":"PMC1431599","chunks":["JOURNAL INFORMATION\n==============================\nNLM Title Abb(...TRUNCATED) |
15 | [{"pmcid":"PMC1470097","chunks":["JOURNAL INFORMATION\n==============================\nNLM Title Abb(...TRUNCATED) |
16 | [{"pmcid":"PMC1475032","chunks":["JOURNAL INFORMATION\n==============================\nNLM Title Abb(...TRUNCATED) |
17 | [{"pmcid":"PMC1519009","chunks":["JOURNAL INFORMATION\n==============================\nNLM Title Abb(...TRUNCATED) |
18 | [{"pmcid":"PMC1533428","chunks":["JOURNAL INFORMATION\n==============================\nNLM Title Abb(...TRUNCATED) |
19 | [{"pmcid":"PMC1550856","chunks":["JOURNAL INFORMATION\n==============================\nNLM Title Abb(...TRUNCATED) |
20 | [{"pmcid":"PMC1567237","chunks":["JOURNAL INFORMATION\n==============================\nNLM Title Abb(...TRUNCATED) |
21 | [{"pmcid":"PMC1570350","chunks":["JOURNAL INFORMATION\n==============================\nNLM Title Abb(...TRUNCATED) |
22 | [{"pmcid":"PMC1617328","chunks":["JOURNAL INFORMATION\n==============================\nNLM Title Abb(...TRUNCATED) |
23 | [{"pmcid":"PMC1654147","chunks":["JOURNAL INFORMATION\n==============================\nNLM Title Abb(...TRUNCATED) |
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