| --- |
| language: |
| - en |
| bigbio_language: |
| - English |
| license: other |
| bigbio_license_shortname: UNKNOWN |
| multilinguality: monolingual |
| pretty_name: Bio-ID |
| homepage: https://biocreative.bioinformatics.udel.edu/tasks/biocreative-vi/track-1/ |
| bigbio_pubmed: true |
| bigbio_public: true |
| bigbio_tasks: |
| - NAMED_ENTITY_RECOGNITION |
| - NAMED_ENTITY_DISAMBIGUATION |
| --- |
| |
|
|
| # Dataset Card for Bio-ID |
|
|
| ## Dataset Description |
|
|
| - **Homepage:** https://biocreative.bioinformatics.udel.edu/tasks/biocreative-vi/track-1/ |
| - **Pubmed:** True |
| - **Public:** True |
| - **Tasks:** NER,NED |
|
|
|
|
| The Bio-ID track focuses on entity tagging and ID assignment to selected bioentity types. |
| The task is to annotate text from figure legends with the entity types and IDs for taxon (organism), gene, protein, miRNA, small molecules, |
| cellular components, cell types and cell lines, tissues and organs. The track draws on SourceData annotated figure |
| legends (by panel), in BioC format, and the corresponding full text articles (also BioC format) provided for context. |
|
|
|
|
| ## Citation Information |
|
|
| ``` |
| @inproceedings{arighi2017bio, |
| title={Bio-ID track overview}, |
| author={Arighi, Cecilia and Hirschman, Lynette and Lemberger, Thomas and Bayer, Samuel and Liechti, Robin and Comeau, Donald and Wu, Cathy}, |
| booktitle={Proc. BioCreative Workshop}, |
| volume={482}, |
| pages={376}, |
| year={2017} |
| } |
| ``` |
|
|
