quantem-data / README.md
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docs: document widget-tutorials layout; retarget notebooks to it
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metadata
license: mit
tags:
  - electron-microscopy
  - 4D-STEM
  - materials-science
  - quantem
pretty_name: quantem-data

quantem-data

Reference electron-microscopy datasets (gold 4D-STEM and HAADF) for browsing and learning with quantem.widget. This repo just hosts the data — all instructions live in one place:

How to download and use this data: follow the Download data tutorial in the quantem.widget docs. One call per dataset:

from quantem.widget import Show4DSTEM
from quantem.widget.datasets import show4dstem_gold

Show4DSTEM(show4dstem_gold())

Layout — two trees:

  • widget-tutorials/<widget>/<dataset>/<size>/ — baseline tutorial bundles for the core widgets (show1d/, show4dstem/, showfolder/; data shared by Show2D and Show3D lives under shared/). These back the one-call loaders in quantem.widget.datasets and the Colab workshops. Baseline tutorials only — real work uses your own data.
  • 4dstem/, haadf/ — full-size originals (Arina h5, Velox EMD) for power users.

Every NumPy bundle ships a meta.json (shape, dtype, sampling, units, optics) next to data.npy.

Workshop notebooks (Google Colab, no local install): Show4DSTEM demo · Workshop v1

Acquisition parameters

The 20260423 drift session's optics are confirmed via the session's own HAADF EMD (AccelerationVoltage, BeamConvergence, CameraLength). 4D-STEM scan_sampling is an operator pattern from a sibling SSB session — the drift acquisition itself was never per-file calibrated.

dataset voltage probe CL scan scan sampling det pitch mag
haadf/gold_haadf_npy 300 kV ✓ 30 mrad ✓ 91 mm ✓ 4096² image 0.0186 nm/px n/a FOV 76.2 nm
4dstem/gold_512_npy_bin8 300 kV ✓ 30 mrad ✓ 91 mm ✓ 512² 0.5 Å (op) 3.68 mrad/px unknown
4dstem/gold_512_npy_bin4 300 kV ✓ 30 mrad ✓ 91 mm ✓ 512² 0.5 Å (op) 1.84 mrad/px unknown
4dstem/gold_512 300 kV ✓ 30 mrad ✓ 91 mm ✓ 512² 0.5 Å (op) 0.46 mrad/px unknown
4dstem/gold_30mrad1.3mx0409 300 kV 30 mrad 91 mm smaller (session yaml) 0.46 mrad/px 1.3 Mx
haadf/gold_haadf.emd 300 kV ✓ 30 mrad ✓ 91 mm ✓ 4096² image 0.0186 nm/px n/a FOV 76.2 nm

✓ = confirmed via EMD/yaml. (op) = operator pattern, not file-certified.

License

MIT — free to use for anything. Citing quantem.widget in publications is appreciated.