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Datasets:
chebai
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chebifier

Tags:
ChEBI
chemistry
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chebifier / README.md
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metadata 
license: mit
tags:
  - ChEBI
  - chemistry

Configurations and assets for Chebifier. This includes

  • chebi_graph_v252 - The ChEBI hierarchy (for ChEBI version 252). This is used to identify subclass-superclass relations, e.g. for inconsistency resolution.
  • config_26-09_web.yml and config_26-09_eval.yml - standard ensemble configurations.
  • disjoint_chebi.csv and disjoint_additional.csv - pairwise disjointness relations between ChEBI classes. Used during inconsistency resolution.
  • wmv-f1-3star-symbolic - ensemble calibration. This includes the per-model and per-class weights, hyperparameters and the list of classes covered by this ensemble calibration.
  • web_assets - additional files for the web version of Chebifier. This includes an additional config with descriptions for every model and a precision/recall curve.