|
Download docs/API.md from datalab-to/omni_extract_bench: direct link, hf CLI and curl.
- Browser
- Download file 18.4 kB
-
https://huggingface.co/datasets/datalab-to/omni_extract_bench/resolve/main/docs/API.md
- Command line
-
hf download hf://datasets/datalab-to/omni_extract_bench/docs/API.md
-
curl -L -o API.md https://huggingface.co/datasets/datalab-to/omni_extract_bench/resolve/main/docs/API.md
18.4 kB
| # API | |
| This is the public facing API for the toolkit. There are three main entry points: | |
| - `score`: score a document's prediction against the ground truth. | |
| - `predict`: predict extractions for a document with one of our providers. | |
| - `benchmark`: run our benchmark. | |
| The first two are the primitives the last one is built around. Each works in your code and | |
| from the cli. The cli is a thin wrapper, except that `benchmark` shows you the plan and waits | |
| -- nothing in the library ever reads stdin. | |
| 1. **[score](#score)** — grade one prediction against one ground truth. | |
| 2. **[predict](#predict)** — one document, one vendor. | |
| 3. **[benchmark](#benchmark)** — the whole corpus, every vendor, resumable. | |
| 4. **[providers](#providers)** — what you can run, and what each one takes. | |
| 5. **[What a benchmark writes](#what-a-benchmark-writes)** — the files, and what's in them. | |
| ## score | |
| Just the base install. No network, no API keys, no vendor packages. | |
| Use in your own code. | |
| ```python | |
| from omni_extract_bench import score | |
| score( | |
| pred, # the prediction, a dict | |
| gt, # the ground truth, a dict | |
| schema, # the JSON Schema the prediction was generated against | |
| order_matters=(), # arrays where position is part of the answer, e.g. ["steps"] | |
| verdicts=False, # also return one verdict per address | |
| ) | |
| ``` | |
| ```python | |
| result = score(prediction, ground_truth, schema) | |
| result["accuracy"] # matched addresses / addresses either document used | |
| result["precision"] | |
| result["recall"] | |
| ``` | |
| or from the command line. | |
| ```bash | |
| oeb score --pred pred.json --gt gold.json --schema schema.json | |
| ``` | |
| ```json | |
| { | |
| "accuracy": 0.5294117647058824, | |
| "precision": 0.5625, | |
| "recall": 0.8181818181818182, | |
| "f1": 0.6666666666666666, | |
| ...truncated for display | |
| ``` | |
| Every argument is a flag of the same name, underscores as dashes, so `order_matters` is | |
| `--order-matters`. It goes to stdout, so `oeb score ... | jq .accuracy` is one pipe. | |
| The README has a [worked example](../README.md#score) and | |
| [`docs/METRIC_SPEC.md`](./METRIC_SPEC.md) is the full specification. | |
| ## predict | |
| Needs the harness extra. | |
| ```bash | |
| uv pip install 'omni-extract-bench[harness]' | |
| ``` | |
| Use in your own code. | |
| ```python | |
| from omni_extract_bench.harness import predict | |
| predict( | |
| provider, # a vendor name, or an OpenRouter model id | |
| pdf, # path to the document | |
| schema, # the JSON Schema to extract against | |
| timeout=1800.0, # seconds this document may take, end to end | |
| overlay=True, # state the gold's conventions in the field descriptions | |
| **options, # anything the provider takes, e.g. mode="accurate" | |
| ) | |
| ``` | |
| Keys come from the environment and nowhere else -- `DATALAB_API_KEY`, `REDUCTO_API_KEY`, | |
| `OPENROUTER_API_KEY` and so on. Options are recorded in the run, and a key should never be. | |
| You get back the answer and the evidence for it. | |
| ```python | |
| record = predict("datalab", "invoice.pdf", schema, mode="accurate") | |
| record["result"] # the extraction, shaped like your schema | |
| record["raw"] # the vendor's response, as received | |
| record["cost"] # what the vendor said this cost, plus wall_s and attempts | |
| record["error"] # None, or what went wrong | |
| record["run_manifest"] # what the vendor was actually sent | |
| ``` | |
| Score directly from the prediction. | |
| ```python | |
| from omni_extract_bench import score | |
| score(record["result"], gold, schema) | |
| ``` | |
| You can also use the cli: | |
| ```bash | |
| oeb predict --provider datalab --doc invoice.pdf --schema schema.json \ | |
| --options '{"mode": "accurate"}' | |
| ``` | |
| ```json | |
| { | |
| "result": {"invoice_id": "INV-4417", "total_due": 1240.0, ...}, | |
| "error": null, | |
| "provider": "datalab", | |
| "cost": {"usd": 1.4, "wall_s": 172.4, "attempts": 1, ...}, | |
| ...truncated for display | |
| ``` | |
| Three types of errors raise: | |
| ```python | |
| MissingCredential # an unset API key | |
| MissingDependency # an adapter whose SDK isn't installed | |
| AccountFailure # the account can't pay | |
| ``` | |
| Everything else comes back in `record["error"]` with the prediction beside it. | |
| ## benchmark | |
| Needs the benchmark extra. | |
| ```bash | |
| uv pip install 'omni-extract-bench[benchmark]' | |
| ``` | |
| **!!NOTE!!**: running this will cost money and you will need your API keys set. | |
| Use in your own code. | |
| ```python | |
| from omni_extract_bench.benchmark import BenchmarkRun | |
| BenchmarkRun( | |
| providers, # e.g. ["datalab"] | |
| out="runs", # where runs go | |
| data_root=None, # where the corpus lands. Default: the HuggingFace cache | |
| manifest=None, # own manifest instead of ours | |
| repo=None, # a different HuggingFace dataset. Default: ours | |
| suites=None, # limit to these suites | |
| limit=0, # first N documents | |
| timeout=1800.0, | |
| predict_workers=None, # documents in flight per vendor | |
| score_workers=0, # processes used to score | |
| verdicts=True, # write verdicts; False to skip them | |
| rescore=False, # score every document again | |
| score_only=False, # score the predictions; call no vendor | |
| options=None, # per-provider settings: {"datalab": {"mode": "accurate"}} | |
| ) | |
| ``` | |
| ```python | |
| summary = BenchmarkRun(["datalab", "reducto"], limit=5).execute() | |
| summary["datalab-f46415c9"]["accuracy"] # e.g. 0.9145 | |
| ``` | |
| ### Three levels of abstraction | |
| ```python | |
| BenchmarkRun # every Run, grouped by adapter, predicted then graded | |
| ProviderRun # every Run using a provider, through one pool sized to that service | |
| Run # a provider plus its options | |
| ``` | |
| - A `Run` is a provider plus its options. For example, `datalab` at `mode=accurate`. It has its own self-contained directory of results. | |
| - A `ProviderRun` is every Run for one provider sharing one pool of threads. The cap belongs to the provider. | |
| ### From the cli | |
| ```bash | |
| oeb benchmark --out runs/ --limit 1 --providers datalab reducto | |
| ``` | |
| ``` | |
| benchmark | |
| out runs | |
| runs 2 over 2 adapters | |
| corpus huggingface datalab-to/omni_extract_bench | |
| documents 1 document selected | |
| timeout 1800s per document | |
| score only false | |
| rescoring false | |
| ╭─────────┬─────────┬──────────────────┬─────────────────────────────────┬─────────┬───────╮ | |
| │ adapter │ at once │ run │ settings │ predict │ grade │ | |
| ├─────────┼─────────┼──────────────────┼─────────────────────────────────┼─────────┼───────┤ | |
| │ datalab │ 10 │ datalab-f46415c9 │ base_url=https://www.datalab.to │ 1 │ 1 │ | |
| │ │ │ │ ─────────────────────────────── │ │ │ | |
| │ │ │ │ mode=balanced │ │ │ | |
| │ │ │ │ ─────────────────────────────── │ │ │ | |
| │ │ │ │ poll_interval=5.0 │ │ │ | |
| ├─────────┼─────────┼──────────────────┼─────────────────────────────────┼─────────┼───────┤ | |
| │ reducto │ 3 │ reducto-e54d3a1d │ agentic_table_mode=max │ 1 │ 1 │ | |
| │ │ │ │ ─────────────────────────────── │ │ │ | |
| │ │ │ │ deep_extract_model=v2 │ │ │ | |
| │ │ │ │ ─────────────────────────────── │ │ │ | |
| │ │ │ │ poll_interval=5 │ │ │ | |
| │ │ │ │ ─────────────────────────────── │ │ │ | |
| │ │ │ │ system_prompt='' │ │ │ | |
| ╰─────────┴─────────┴──────────────────┴─────────────────────────────────┴─────────┴───────╯ | |
| proceed? [y/N] | |
| ``` | |
| You can pass `-y` to skip the interactive confirmation. The execution looks like: | |
| ``` | |
| run done ok err in flight cost avg dur | |
| ──────────────────────────────────────────────────────────────────────────────────────────── | |
| datalab-f46415c9 ━━━━━━━━━━━━━━━━ 20/20 20 0 $6.20 1m58s 3.0s | |
| datalab-01a72762 ━━━━━━━━━━━━━━━━ 20/20 20 0 $6.20 2m02s 3.0s | |
| reducto-e54d3a1d ━━━━━━━━━━━━━━━━ 20/20 19 1 5,820 cr 2m19s 3.0s | |
| mistral-44136fa3 ━━━━━━━━━━━━━━━━ 20/20 20 0 2m13s 3.0s | |
| 80/80 documents 1 failed $12.40 + 5,820 cr 3.0s elapsed | |
| ``` | |
| ### Settings per provider | |
| `--options` can give one provider a **list**, and each entry is its own `Run`. For example: | |
| ```bash | |
| oeb benchmark \ | |
| --providers datalab reducto \ | |
| --options '{"datalab": [{"mode": "balanced"}, {"mode": "accurate"}], | |
| "reducto": [{"agentic_table_mode": "max"}, | |
| {"agentic_table_mode": "default"}]}' \ | |
| --out runs/ | |
| ``` | |
| That's 4 runs. | |
| ### A manifest of your own | |
| ```bash | |
| oeb benchmark --providers datalab --manifest my/corpus/manifest.parquet | |
| ``` | |
| Same parquet shape as [ours](https://huggingface.co/datasets/datalab-to/omni_extract_bench). Or | |
| you can point to your own HuggingFace dataset, which is fetched the same way ours is. | |
| ```bash | |
| oeb benchmark --providers datalab --repo someone/their-corpus | |
| ``` | |
| Whichever you use, the run records it in `settings.json` and refuses a directory that already | |
| holds another one. | |
| ### Resuming | |
| It's **resumable**, and safe to run twice. | |
| - A document is predicted again only when it has no record. The record is written last, so | |
| its presence means the prediction beside it is complete. | |
| - A document is graded again only when it has no row in `scores.jsonl`. | |
| So a Ctrl-C, a crash or a credit ceiling costs you the documents in flight, and nothing else. | |
| Reinvoke the same command to carry on. | |
| ## providers | |
| See providers: | |
| ```bash | |
| oeb providers | |
| ``` | |
| ``` | |
| provider | |
| ─────────────────────── | |
| azure-cu | |
| datalab | |
| extend | |
| llamaextract | |
| mistral | |
| reducto | |
| openai/gpt-5.6-sol | |
| anthropic/claude-opus-5 | |
| google/gemini-3.7-flash | |
| the three model ids are examples: any OpenRouter org/model id works. | |
| ``` | |
| See what settings each takes and its default values. For example, datalab: | |
| ```bash | |
| oeb providers datalab | |
| ``` | |
| ``` | |
| datalab | |
| option default | |
| ────────────────────────────────────── | |
| mode balanced | |
| base_url https://www.datalab.to | |
| poll_interval 5.0 | |
| oeb benchmark --providers datalab --options '{"datalab": {"mode": ...}}' | |
| ``` | |
| Those defaults are the vendor's maximum tier. Parity here is "as much as the vendor will give", | |
| not one number for everyone. | |
| In your code: | |
| ```python | |
| from omni_extract_bench.harness import PROVIDERS, settings_for | |
| PROVIDERS | |
| # ['azure-cu', 'datalab', 'extend', 'llamaextract', 'mistral', 'reducto'] | |
| settings_for("datalab") | |
| # {'mode': 'balanced', 'base_url': 'https://www.datalab.to', 'poll_interval': 5.0} | |
| settings_for("datalab", {"mode": "accurate"}) | |
| # {'mode': 'accurate', 'base_url': 'https://www.datalab.to', 'poll_interval': 5.0} | |
| ``` | |
| ## What a benchmark writes | |
| One directory per run. | |
| ``` | |
| runs/ | |
| ├── datalab-f46415c9/ | |
| │ ├── settings.json | |
| │ ├── summary.json | |
| │ ├── predictions/<doc_id>.json | |
| │ ├── records/<doc_id>.json | |
| │ ├── scores.jsonl | |
| │ └── verdicts/<doc_id>.jsonl # unless --no-verdicts | |
| ├── datalab-01a72762/ | |
| └── reducto-e54d3a1d/ | |
| ``` | |
| Each is named for the provider and an eight-character digest of everything it was asked. That's | |
| what keeps two configurations of one vendor apart. `datalab-f46415c9` is the balanced run, | |
| `datalab-01a72762` is the accurate one, and neither can be handed the other's answers. | |
| The digest isn't meant to be read. `settings.json` is where you read what a run was. | |
| ### settings.json | |
| What the run asked for, written **before** the first document -- so an interrupted run still | |
| says what it is. | |
| ```json | |
| { | |
| "run": "datalab-f46415c9", | |
| "provider": "datalab", | |
| "settings": { | |
| "mode": "balanced", | |
| "base_url": "https://www.datalab.to", | |
| "poll_interval": 5.0 | |
| }, | |
| "timeout_s": 1800.0, | |
| "corpus": "huggingface datalab-to/omni_extract_bench" | |
| } | |
| ``` | |
| `settings` is the whole resolved configuration, not just what you passed. | |
| ### summary.json | |
| What it came to, written as soon as that run is graded rather than when the whole invocation | |
| finishes. | |
| ```json | |
| { | |
| "run": "datalab-f46415c9", | |
| "provider": "datalab", | |
| "settings": {"mode": "balanced", "base_url": "https://www.datalab.to", "poll_interval": 5.0}, | |
| "documents": 6, | |
| "scored": 6, | |
| "coverage": 1.0, | |
| "accuracy": 0.8076406248606786, | |
| "precision": 0.8101146573593331, | |
| "recall": 0.9539514921288181, | |
| "misread_rate": 0.03748563782596681, | |
| "unfound_rate": 0.002711187188462559, | |
| "fabricated_rate": 0.14784472888803452, | |
| "invented_item_rate": 0.0043178212368574645, | |
| "invented_field_rate": 0.0, | |
| "per_suite": { | |
| "extractbench": {"documents": 6, "scored": 6, "coverage": 1.0, "accuracy": 0.8076406248606786, | |
| "...": "the same block, per suite"} | |
| } | |
| } | |
| ``` | |
| The run and each suite are the same shape, so whatever you read at the top you can read per | |
| suite as well. | |
| ### predictions/<doc_id>.json | |
| The bare extraction, shaped like the schema. This is what scoring reads, and it's the same | |
| thing `predict` returns as `record["result"]`. | |
| ### records/<doc_id>.json | |
| Everything else about that document. Two files because scoring wants the answer and an audit | |
| wants all of it. | |
| ```json | |
| { | |
| "result": "...", | |
| "raw": "...", | |
| "error": null, | |
| "provider": "datalab", | |
| "cost": { | |
| "usd": 1.4, | |
| "source": "cost_breakdown.final_cost_cents", | |
| "tokens_in": null, | |
| "tokens_out": null, | |
| "credits": null, | |
| "wall_s": 172.4, | |
| "attempts": 1, | |
| "billed_out_of_band": false | |
| }, | |
| "job_id": "32RBrjAbYxN0yDlOF__lDQ", | |
| "schema_sent": {"...": "the schema this vendor received"}, | |
| "run_manifest": { | |
| "timeout_s": 1800, | |
| "settings": {"mode": "balanced", "base_url": "https://www.datalab.to", "poll_interval": 5.0}, | |
| "model": null, | |
| "timed_out": false, | |
| "conventions_applied": false, | |
| "captured_at": "2026-09-18T15:06:13" | |
| } | |
| } | |
| ``` | |
| ### scores.jsonl | |
| One line per document, in document order whatever order the workers finished in. | |
| ```json | |
| { | |
| "doc_id": "long__dd1155_schedule_continuation_0011", | |
| "suite": "extractbench", | |
| "provider": "datalab", | |
| "status": "scored", | |
| "accuracy": 0.9555555555555556, | |
| "precision": 0.9555555555555556, | |
| "recall": 1.0, | |
| "f1": 0.9772727272727273, | |
| "total": 90, | |
| "matched": 86, | |
| "misread": 0, | |
| "unfound": 0, | |
| "fabricated": 4, | |
| "invented_item": 0, | |
| "invented_field": 0, | |
| "asserted": 90, | |
| "addresses_found": 0.9555555555555556, | |
| "addresses_read_right": 1.0, | |
| "gt_rows": 20, | |
| "pred_rows": 20, | |
| "matched_rows": 20, | |
| "matching_exact": true, | |
| "approximated": [], | |
| "skipped_open_maps": [] | |
| } | |
| ``` | |
| ### verdicts/<doc_id>.jsonl | |
| One line per address: what happened there, and what each side was compared as. This is the | |
| same shape `score(..., verdicts=True)` returns, and it's a low-level address breakdown of how | |
| scoring happened. | |
| Written by default, because it's what lets a number be argued with rather than only quoted. | |
| It's also the bulk of what a run writes -- around five times the gold it grades, so a | |
| four-provider run over our corpus is a couple of gigabytes. Pass `--no-verdicts` and you get | |
| `scores.jsonl` and `summary.json` and nothing else. | |
| One line looks like this: | |
| ```json | |
| {"address": [["k", "line_items"], ["i", 0], ["k", "unit_price"]], "gold_raw": 12.5, "pred_raw": 12.05, "gold_canon": "12.5", "pred_canon": "12.05", "verdict": "misread"} | |
| ``` | |
| `address` is the path to the scalar, one step at a time: `["k", name]` walks into a key, | |
| `["i", n]` into an array element. So that one reads `line_items[0].unit_price`. | |
| `gold_raw` and `pred_raw` are what each document said; `gold_canon` and `pred_canon` are what | |
| they were actually compared as, after normalising. | |
| There are six verdicts, and every address gets exactly one: | |
| ``` | |
| matched both documents addressed it and agree | |
| misread both addressed it and the values disagree | |
| unfound the gold has it, the prediction doesn't | |
| fabricated the schema offered the slot, the document is silent | |
| invented_field a name the schema never declared | |
| invented_item a value under an array row that paired with nothing | |
| ``` | |
| `fabricated` keys off the **schema**, not gold's `null`s. The schema offered `purchase_order`, | |
| the document doesn't cite one, and the model produced `PO-88231` from nowhere. | |
| And in the `invented_item` line the index is `"p2"`, not a number. A predicted row that paired | |
| with a gold row takes gold's index; one that paired with nothing gets a made-up label | |
| instead. | |
| [`METRIC_SPEC.md`](./METRIC_SPEC.md) §4 has the full vocabulary and how the counts add up. | |