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The dataset generation failed
Error code:   DatasetGenerationError
Exception:    ValueError
Message:      Invalid string class label patherea@eb8a6c38cb1df3381b22385ed7b6175091c87ea5
Traceback:    Traceback (most recent call last):
                File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1537, in _prepare_split_single
                  example = self.info.features.encode_example(record) if self.info.features is not None else record
                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/features/features.py", line 2162, in encode_example
                  return encode_nested_example(self, example)
                File "/usr/local/lib/python3.14/site-packages/datasets/features/features.py", line 1446, in encode_nested_example
                  {k: encode_nested_example(schema[k], obj.get(k), level=level + 1) for k in schema}
                      ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/features/features.py", line 1469, in encode_nested_example
                  return schema.encode_example(obj) if obj is not None else None
                         ~~~~~~~~~~~~~~~~~~~~~^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/features/features.py", line 1144, in encode_example
                  example_data = self.str2int(example_data)
                File "/usr/local/lib/python3.14/site-packages/datasets/features/features.py", line 1081, in str2int
                  output = [self._strval2int(value) for value in values]
                            ~~~~~~~~~~~~~~~~^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/features/features.py", line 1102, in _strval2int
                  raise ValueError(f"Invalid string class label {value}")
              ValueError: Invalid string class label patherea@eb8a6c38cb1df3381b22385ed7b6175091c87ea5
              
              The above exception was the direct cause of the following exception:
              
              Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1369, in compute_config_parquet_and_info_response
                  parquet_operations, partial, estimated_dataset_info = stream_convert_to_parquet(
                                                                        ~~~~~~~~~~~~~~~~~~~~~~~~~^
                      builder, max_dataset_size_bytes=max_dataset_size_bytes
                      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                  )
                  ^
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 948, in stream_convert_to_parquet
                  builder._prepare_split(split_generator=splits_generators[split], file_format="parquet")
                  ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1382, in _prepare_split
                  for job_id, done, content in self._prepare_split_single(
                                               ~~~~~~~~~~~~~~~~~~~~~~~~~~^
                      gen_kwargs=gen_kwargs, job_id=job_id, **_prepare_split_args
                      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                  ):
                  ^
                File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1560, in _prepare_split_single
                  raise DatasetGenerationError("An error occurred while generating the dataset") from e
              datasets.exceptions.DatasetGenerationError: An error occurred while generating the dataset

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End of preview.

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Check out the documentation for more information.

Patherea: Cell Detection and Classification for the 2020s

📄 Citation

If you use this data or find it helpful, please cite our work:

@article{vstepec2024patherea,
  title={Patherea: Cell Detection and Classification for the 2020s},
  author={{\v{S}}tepec, Dejan and Jer{\v{s}}e, Maja and {\DJ}oki{\'c}, Sne{\v{z}}ana and Jeruc, Jera and Zidar, Nina and Sko{\v{c}}aj, Danijel},
  journal={arXiv preprint arXiv:2412.16425},
  year={2024}
}

📚 Read the paper on arXiv: https://arxiv.org/abs/2412.16425

license: cc-by-nc-4.0

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