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PMC11502666
hand-curated
Distribution
T4
multi
true
Measuring the dynamic balance of integration and segregation underlying consciousness, anesthesia, and sleep in humans
null
block_id,panel_group,panel_row,panel_col,record_type,condition,model_name,canopy_temperature_excess_c,chlorophyll_fluorescence_yield,nitrogen_stress_score,bin_left_score,bin_right_score,normalized_frequency,false_positive_rate,true_positive_rate,averaging_window_days,auc,standard_error,sample_id,replicate_count A,trait...
"""Self-contained renderer for the four-panel ISD figure.""" from pathlib import Path import matplotlib matplotlib.use("Agg") import matplotlib.pyplot as plt import numpy as np from matplotlib.colors import Normalize OUT = Path(__file__).resolve().parent / "figure.png" # Deterministic numeric data used by the den...
[ { "filename": "data.csv", "content": [ 105, 110, 116, 101, 103, 114, 97, 116, 105, 111, 110, 44, 115, 101, 103, 114, 101, 103, 97, 116, 105, 111, 110, 44, 105...
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11502666/
Jang_2024
null
null
PMC11840003
hand-curated
Box/Violin
T5
multi
true
Time-resolved oxidative signal convergence across the algae–embryophyte divide
null
"block_id,panel_group,panel_row,panel_col,record_type,material_system,coating_family,condition,stres(...TRUNCATED)
"\"\"\"Code-native reconstruction of the PMC11840003 composite figure.\n\nThe original ``code.py`` d(...TRUNCATED)
[]
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11840003/
Rieseberg_2025
null
null
PMC12000431
hand-curated
Distribution
T4
multi
true
Patterns and drivers of Holocene moisture variability in mid-latitude eastern North America
null
"study_id,panel_group,panel_row,panel_col,panel_title,panel_role,record_type,series_id,series_label,(...TRUNCATED)
"\"\"\"Self-contained, deterministic renderer for the four-panel periodicity figure.\"\"\"\nfrom pat(...TRUNCATED)
[{"filename":"data.csv","content":"cGFuZWwsa2luZCxzaXRlX29yX21vZGVsLHBlcmlvZF9rYSxkZW5zaXR5DQphLHdiL(...TRUNCATED)
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12000431/
Salonen_2025
null
null
PMC12354736
hand-curated
Distribution
T4
multi
true
Multimodal spatial transcriptomic characterization of mouse kidney injury and repair
null
"block_id,panel_group,panel_row,panel_col,record_type,condition,time_hours,microbial_state,feature_o(...TRUNCATED)
"from pathlib import Path\n\nimport matplotlib\n\nmatplotlib.use(\"Agg\")\n\nimport matplotlib.pyplo(...TRUNCATED)
[{"filename":"data.npz","content":"UEsDBC0AAAAAAAAAIQAWil0J//////////8OABQAZW5yaWNobWVudC5ucHkBABAAC(...TRUNCATED)
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12354736/
Xuanyuan_2025
null
null
PMC12504421
hand-curated
Heatmap
T6
multi
true
"Human pancreatic α-cell heterogeneity and trajectory inference analyses reveal SMOC1 as a β-cell (...TRUNCATED)
null
"block_id,panel_group,panel_row,panel_col,record_type,trajectory,condition,site,sampling_week,indica(...TRUNCATED)
"#!/usr/bin/env python3\n\"\"\"Self-contained release render for the PMC12504421 trajectory composit(...TRUNCATED)
[{"filename":"data.csv","content":"cGFuZWwscGxvdF90eXBlLHNlcmllcyxpZGVudGl0eSxnZW5lLHgseSx2YWx1ZSxwZ(...TRUNCATED)
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12504421/
Kang_2025
null
null
PMC12905268
hand-curated
Distribution
T4
multi
true
Soil carbon debt from land use change in Brazil
null
"block_id,panel_group,panel_row,panel_col,estuary_region,sediment_depth_stratum,depth_order,shorelin(...TRUNCATED)
"\"\"\"Self-contained reproduction of the supplied SOC-stocks figure.\"\"\"\nfrom pathlib import Pat(...TRUNCATED)
[{"filename":"data.csv","content":"YmlvbWUsZGVwdGhfY20sbGFuZF91c2Usc29jX3N0b2NrX01nX0NfaGENCk92ZXJhb(...TRUNCATED)
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12905268/
Villela_2026
null
null
PMC13009336
hand-curated
Box/Violin
T5
multi
true
"A macrophage-induced subpopulation of mesenchymal cells expressing Fcer1g contributes to wound-indu(...TRUNCATED)
null
"block_id,panel_group,panel_row,panel_col,record_type,sample_id,timepoint_days,reef_condition,bacter(...TRUNCATED)
"\"\"\"Self-contained, deterministic renderer for the PMC13009336 sample figure.\"\"\"\nfrom pathlib(...TRUNCATED)
[{"filename":"data.csv","content":"cGFuZWwsZ3JvdXAsdmFsdWUNCmdfc3NHU0VBLE5vcm1hbCBTa2luLDAuNDY1NDQzO(...TRUNCATED)
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13009336/
Ma_2026
null
null
PMC13022287
hand-curated
Distribution
T4
multi
true
"Molecular signatures and causal factors underlying latent cytomegalovirus infection among people li(...TRUNCATED)
null
"block_id,panel_group,panel_row,panel_col,record_type,subject_id,cohort,condition,category,category_(...TRUNCATED)
"\"\"\"Self-contained, deterministic rendering of the supplied composite figure.\"\"\"\nfrom pathlib(...TRUNCATED)
[{"filename":"data.csv","content":"cGFuZWwsc2VyaWVzLGVsZW1lbnRfdHlwZSxwb2ludF9pbmRleCx4LHkseDIseTIsY(...TRUNCATED)
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13022287/
Nguyen_2026
null
null
PMC13079874
hand-curated
Box/Violin
T5
multi
true
"Comprehensive benchmarking of metagenomic binning tools reveals key factors for improved genome rec(...TRUNCATED)
null
"block_id,panel_group,panel_row,panel_col,record_type,treatment,hydrologic_zone,measurement,unit,rep(...TRUNCATED)
"\"\"\"Compact, reference-shaped reconstruction of PMC13079874 panels a-e.\n\nThe a-d values are rea(...TRUNCATED)
[{"filename":"data.csv","content":"cGFuZWwsZm9ybWF0X29yX3Rvb2wsdG9vbF9vcl9jYXRlZ29yeSx2YWx1ZQ0KYSxQY(...TRUNCATED)
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13079874/
Kim_2026
null
null
PMC13106710
hand-curated
Heatmap
T6
multi
true
Behavioral screening defines the molecular Parkinsonism-related subgroups in Drosophila
null
"block_id,panel_group,panel_row,panel_col,record_type,time_hours,light_phase,individual_id,family_id(...TRUNCATED)
"\"\"\"Compact, source-shaped reproduction of panels b, c, e and g.\n\nPanel e uses the genotype-by-(...TRUNCATED)
[{"filename":"data.csv","content":"enQsY3RybF9iX21lYW4scGRmX2JfbWVhbixjdHJsX2dfbWVhbixwYXJrX2dfbWVhb(...TRUNCATED)
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13106710/
Kaempf_2026
null
null
End of preview. Expand in Data Studio

PlotTwin-Bench

PlotTwin-Bench is a benchmark for figure style transfer: given a reference figure and a new dataset, produce a plotting script that draws the new data in the reference's visual style. Every reference is a publication-style matplotlib figure shipped with the script that renders it.

Configs

config rows style-transfer tasks contents
bench (default) 150 150 the evaluation set: all 50 hand-curated references and 100 augmented references sampled at random
full 399 150 every reference: 50 hand-curated and 349 augmented; the 150 bench rows carry target data

bench is a subset of full, and each bench row appears in full unchanged.

from datasets import load_dataset

bench = load_dataset("figmirror/PlotTwin-Bench", split="test")          # 150 tasks
full = load_dataset("figmirror/PlotTwin-Bench", "full", split="test")   # 399 references
tasks = full.filter(lambda x: x, input_columns="in_bench")              # same 150 tasks

Two sources

Hand-curated (50). Complex figures selected from papers at top venues and journals, each replotted by hand in matplotlib to form an aligned figure–code pair. Every hand-curated row cites the figure it was replotted from (source_url, source_title, source_bibkey; BibTeX in sources.bib). The reference image is our own rendering, not the published figure.

Augmented (349). Plotting code from existing chart-to-code datasets, rewritten by an LLM pipeline into more complex and visually polished figures, then filtered for both properties. Each row records its seed (seed_dataset, seed_url, seed_id).

Task

A task pairs reference_image with target_data, a CSV describing a new study in a different scientific domain. The target data keeps the reference's chart families and panel structure and changes one to three aspects of the data, such as series count, category cardinality, panel allocation or scale type. A method returns a self-contained plotting script that draws target_data in the style of reference_image.

Fields

field type description
reference_image image the reference figure, rendered by reference_code
id string sample id
source string hand-curated or augmented
chart_type, chart_type_name string one of 12 chart types, T1 Bar … T12 Composite
panel_mode string single or multi
in_bench bool the row belongs to the bench evaluation set
source_url, source_title, source_bibkey string publication a hand-curated reference was replotted from
seed_dataset, seed_url, seed_id string upstream seed of an augmented reference
target_data string CSV to plot in the reference style; set on the 150 task rows
reference_code string matplotlib script that renders reference_image
reference_data list data files the script reads (filename, content)

Rendering a reference

reference_code reads its data files from its own directory and saves one PNG.

from pathlib import Path
import subprocess, sys

def materialize(row, workdir):
    workdir = Path(workdir) / row["id"]
    workdir.mkdir(parents=True, exist_ok=True)
    (workdir / "code.py").write_text(row["reference_code"])
    for f in row["reference_data"]:
        (workdir / f["filename"]).write_bytes(f["content"])
    if row["target_data"]:
        (workdir / "target_data.csv").write_text(row["target_data"])
    return workdir

sample = materialize(bench[0], "plottwin")
subprocess.run([sys.executable, "code.py"], cwd=sample, check=True)

The released images were rendered with Python 3.13, matplotlib 3.10.9 and numpy 2.4.4 (Agg backend). Other font sets or library versions can change text rasterisation slightly.

Scoring

The scorer/ folder holds the PlotTwin-Bench scorer (deviation-defect-v1).

  • S_code parses the reference and candidate scripts and compares nine style attributes: palette, background, figure aspect, line width, grid, hidden spines, tick direction, serif font and legend frame. An attribute counts only when the reference departs from the matplotlib default.
  • S_vision shows a vision model the reference and the candidate image and asks for every reference style choice the candidate misses. Each miss deducts 5, 10 or 25 points (minor, major, critical) from 100.
  • S averages each channel over a split and blends them: S = 0.65 · S_vision + 0.35 · S_code.

A prediction is one <id>.py per task. The script reads the target data from data.csv in its working directory and saves one PNG; the scorer renders it. A <id>.png next to the script is used as the candidate image instead.

hf download figmirror/PlotTwin-Bench --repo-type dataset --include "scorer/*" --local-dir plottwin
cd plottwin/scorer
export OPENAI_API_KEY=...        # set OPENAI_BASE_URL for any OpenAI-compatible endpoint
uv run plottwin-score --pred-dir /path/to/predictions --out-dir scores

The vision model defaults to gpt-5.5; set --model and --reasoning-effort to change it. Per-sample results go to scores/per_sample/<id>.json and are reused when a run restarts; scores/summary.json reports S, S_code and S_vision for the hand-curated and augmented splits. examples/quickstart.py scores a default-style baseline on three tasks end to end:

uv run python examples/quickstart.py

Chart types

type hand-curated augmented (full) bench total
T1 Bar 0 140 18
T2 Line 5 70 20
T3 Scatter 5 25 16
T4 Distribution 9 10 17
T5 Box/Violin 5 27 16
T6 Heatmap 4 19 14
T7 Field 2D 5 19 15
T8 3D 4 5 7
T9 Network/Tree 2 3 2
T10 Polar/Radial 1 29 13
T11 Std-band 7 2 9
T12 Composite 3 0 3

License and attribution

PlotTwin-Bench is released under CC BY-NC 4.0. Augmented references derive from the plotting code of these datasets; follow their terms as well:

seed dataset rows in full upstream terms
ChartNet 151 non-commercial notice
Chart2Code 151 level 1 follows ChartMimic (Apache-2.0); levels 2–3 state no licence
Chart2NCode 31 CC BY-NC 4.0
ChartMimic 15 Apache-2.0
ChartGen-200K 1 CC BY 4.0

Hand-curated references are our own matplotlib replots; please also cite the original publications listed in sources.bib when you discuss individual figures.

Citation

@misc{zhao2026figmirrorgrounditcode,
  title         = {FigMirror: Ground It, Code It, Plot It},
  author        = {Xiaohan Zhao and Jiacheng Liu and Yaxin Luo and Zhiqiang Shen},
  year          = {2026},
  eprint        = {2608.28814},
  archivePrefix = {arXiv},
  primaryClass  = {cs.CV},
  url           = {https://arxiv.org/abs/2608.28814}
}
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